Author details

Full Name

Dariusz Przybylski

Affiliation

Howard Hughes Medical Institute, Brandeis University

ORCID

Career Start Year

2001

Papers

H Index

Expertise

CM4AI Collaborator

Andrej Sali (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36319642	DNA read count calibration for single-molecule, long-read sequencing.	Sci Rep	2022
33438579	A transcriptomic taxonomy of <i>Drosophila</i> circadian neurons around the clock.	Elife	2021
32103177	Lipid availability determines fate of skeletal progenitor cells via SOX9.	Nature	2020
31130381	A Cellular Taxonomy of the Bone Marrow Stroma in Homeostasis and Leukemia.	Cell	2019
29562202	Fas Promotes T Helper 17 Cell Differentiation and Inhibits T Helper 1 Cell Development by Binding and Sequestering Transcription Factor STAT1.	Immunity	2018
28658630	An Integrative Framework Reveals Signaling-to-Transcription Events in Toll-like Receptor Signaling.	Cell Rep	2017
29423108	Cancer immunogenomic approach to neoantigen discovery in a checkpoint blockade responsive murine model of oral cavity squamous cell carcinoma.	Oncotarget	2017
25745177	Immunogenetics. Dynamic profiling of the protein life cycle in response to pathogens.	Science	2015
26189680	A Genome-wide CRISPR Screen in Primary Immune Cells to Dissect Regulatory Networks.	Cell	2015
25186727	The genomic substrate for adaptive radiation in African cichlid fish.	Nature	2014
25437555	Changes in nucleosome occupancy associated with metabolic alterations in aged mammalian liver.	Cell Rep	2014
23598338	The African coelacanth genome provides insights into tetrapod evolution.	Nature	2013
23870653	Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species.	Gigascience	2013
22829535	Finished bacterial genomes from shotgun sequence data.	Genome Res	2012
21187386	High-quality draft assemblies of mammalian genomes from massively parallel sequence data.	Proc Natl Acad Sci U S A	2011
21926179	Assemblathon 1: a competitive assessment of de novo short read assembly methods.	Genome Res	2011
19796385	ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads.	Genome Biol	2009
18678588	Powerful fusion: PSI-BLAST and consensus sequences.	Bioinformatics	2008
17369271	Consensus sequences improve PSI-BLAST through mimicking profile-profile alignments.	Nucleic Acids Res	2007
15141026	Predicting transmembrane beta-barrels in proteomes.	Nucleic Acids Res	2004
15312777	Improving fold recognition without folds.	J Mol Biol	2004
12824315	EVA: Evaluation of protein structure prediction servers.	Nucleic Acids Res	2003
14579345	CAFASP3 in the spotlight of EVA.	Proteins	2003
11933069	Improving the prediction of protein secondary structure in three and eight classes using recurrent neural networks and profiles.	Proteins	2002
11807948	Alignments grow, secondary structure prediction improves.	Proteins	2002
11751240	EVA: continuous automatic evaluation of protein structure prediction servers.	Bioinformatics	2001

1 - 26 of 26

Matt E Oates

University of Bristol

Career Start Year 2013

Number of shared co-authors 2

Kyle Ellrott

Oregon Health & Science University

Career Start Year 2002

Number of shared co-authors 3

Lenore J Cowen

Tufts University, 177 College Avenue

Career Start Year 2001

Number of shared co-authors 0

Julian Gough

Medical Research Council Laboratory of Molecular Biology

Career Start Year 2001

Number of shared co-authors 6

Weizhong Li

J. Craig Venter Institute

Career Start Year 2000

Number of shared co-authors 0

Rajkumar Sasidharan

University of California los angeles

Career Start Year 2000

Number of shared co-authors 2

Kevin Bryson

University of Glasgow

Career Start Year 1999

Number of shared co-authors 2

Robert D Finn

European Bioinformatics Institute

Career Start Year 1999

Number of shared co-authors 3

Daron M Standley

Osaka university

Career Start Year 1998

Number of shared co-authors 4

Dong Xu

University of Missouri

Career Start Year 1998

Number of shared co-authors 0

Iddo Friedberg

Iowa State University

Career Start Year 1997

Number of shared co-authors 2

Sarah A Teichmann

Wellcome Sanger Institute

Career Start Year 1996

Number of shared co-authors 13

John-Marc Chandonia

Lawrence Berkeley National Laboratory

Career Start Year 1995

Number of shared co-authors 2

Alex Bateman

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 1995

Number of shared co-authors 10

Terry Gaasterland

Scripps Institution of Oceanography, University of California San Diego

Career Start Year 1994

Number of shared co-authors 15

Steven E Brenner

University of California berkeley

Career Start Year 1994

Number of shared co-authors 8

Bonnie Berger

Massachusetts Institute of Technology

Career Start Year 1994

Number of shared co-authors 4

Zhiping Weng

University of Massachusetts Medical School

Career Start Year 1992

Number of shared co-authors 12

Steven L Salzberg

Center for Computational Biology, Johns Hopkins University

Career Start Year 1992

Number of shared co-authors 19

Erik L L Sonnhammer

Stockholm University

Career Start Year 1992

Number of shared co-authors 1

Miguel A Andrade-Navarro

Institute of Organismic and Molecular Evolution, Johannes Gutenberg University

Career Start Year 1991

Number of shared co-authors 4

Jaap Heringa

VU University Amsterdam

Career Start Year 1991

Number of shared co-authors 1

Mark Gerstein

Yale University

Career Start Year 1991

Number of shared co-authors 20

Peer Bork

University of Wurzburg

Career Start Year 1989

Number of shared co-authors 23

Adam Godzik

University of California Riverside

Career Start Year 1987

Number of shared co-authors 6

Liisa Holm

Institute of Biotechnology, University of Helsinki

Career Start Year 1986

Number of shared co-authors 3

Michal Linial

Institute of Life Sciences, The Hebrew University of Jerusalem

Career Start Year 1986

Number of shared co-authors 2

Richard Bonneau

Center for Computational Biology (CCB), Flatiron Institute, Simons Foundation

Career Start Year 1983

Number of shared co-authors 4

Chris Sander

Broad Institute of MIT and Harvard

Career Start Year 1979

Number of shared co-authors 10

Shoba Ranganathan

Macquarie University

Career Start Year 1972

Number of shared co-authors 9

row(s) 1 - 30 of 30

Burkhard Rost

Technical University of Munich (TUM)

Co-authored papers 9

David B Jaffe

Co-authored papers 7

Aviv Regev

Broad Institute of MIT and Harvard

Co-authored papers 6

Chad Nusbaum

Co-authored papers 3

Andreas Gnirke

The Center for Genome Architecture, Baylor College of Medicine

Co-authored papers 3

Volker A Eyrich

Columbia University

Co-authored papers 3

Eric S Lander

Vanderbilt-Ingram Cancer Center, Vanderbilt University

Co-authored papers 3

Florencio Pazos

National Centre for Biotechnology (CNB-CSIC)

Co-authored papers 3

Alfonso Valencia

Josep Carreras Leukaemia Research Institute (IJC)

Co-authored papers 3

Steven A Carr

Broad Institute of MIT and Harvard

Co-authored papers 3

Philipp Mertins

Co-authored papers 3

Sante Gnerre

Co-authored papers 3

Nir Hacohen

Broad Institute of MIT and Harvard

Co-authored papers 3

Mallur S Madhusudhan

Indian Institute of Science Education and Research Pune

Co-authored papers 2

Osvaldo Gra??a

Spanish National Cancer Research Centre-CNIO

Co-authored papers 2

Nuno A Fonseca

European Bioinformatics Institute

Co-authored papers 2

Jeremy Johnson

Co-authored papers 2

Ian Korf

University of California davis

Co-authored papers 2

David Haussler

Genomics Institute, University of California Santa Cruz

Co-authored papers 2

Michael C Schatz

Johns Hopkins University

Co-authored papers 2

Bruce D Walker

Ragon Institute of Mass General

Co-authored papers 2

Stephen M J Searle

Wellcome Trust Sanger Institute

Co-authored papers 2

Adam M Phillippy

National Human Genome Research Institute, National Institutes of Health

Co-authored papers 2

Benedict Paten

UC Santa Cruz Genomics Institute, University of California

Co-authored papers 2

Rahul Satija

Center for Genomics and Systems Biology, New York University

Co-authored papers 2

Chris P Ponting

The University of Edinburgh

Co-authored papers 2

Ingrid Y Y Koh

Columbia University Center for Computational Biology and Bioinformatics (C2B2)

Co-authored papers 2

Rayan Chikhi

Co-authored papers 2

Richard Durbin

University of Cambridge

Co-authored papers 2

Andrej Sali (CM4AI)

University of California San Francisco

Co-authored papers 2

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