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Author Details

Emily C Wheeler
University of California
2014
21
12
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
34620690Integrative RNA-omics Discovers GNAS Alternative Splicing as a Phenotypic Driver of Splicing Factor-Mutant Neoplasms.Cancer Discov2022
35778567Aberrant NOVA1 function disrupts alternative splicing in early stages of amyotrophic lateral sclerosis.Acta Neuropathol2022
35905927Prions induce an early Arc response and a subsequent reduction in mGluR5 in the hippocampus.Neurobiol Dis2022
35149558Genetic analysis of cancer drivers reveals cohesin and CTCF as suppressors of PD-L1.Proc Natl Acad Sci U S A2022
331729745-Azacytidine Transiently Restores Dysregulated Erythroid Differentiation Gene Expression in TET2-Deficient Erythroleukemia Cells.Mol Cancer Res2021
33574182Reintroduction of the archaic variant of <i>NOVA1</i> in cortical organoids alters neurodevelopment.Science2021
33649163Erratum: A role for alternative splicing in circadian control of exocytosis and glucose homeostasis.Genes Dev2021
34380031Non-microRNA binding competitively inhibits LIN28 regulation.Cell Rep2021
32393832Pooled CRISPR screens with imaging on microraft arrays reveals stress granule-regulatory factors.Nat Methods2020
32616519A role for alternative splicing in circadian control of exocytosis and glucose homeostasis.Genes Dev2020
32252787Principles of RNA processing from analysis of enhanced CLIP maps for 150 RNA binding proteins.Genome Biol2020
30527666A Transcriptome-wide Translational Program Defined by LIN28B Expression Level.Mol Cell2019
31018137Disruption in A-to-I Editing Levels Affects C. elegans Development More Than a Complete Lack of Editing.Cell Rep2019
30846499Myelodysplastic syndrome-associated spliceosome gene mutations enhance innate immune signaling.Haematologica2019
28853213Advances and challenges in the detection of transcriptome-wide protein-RNA interactions.Wiley Interdiscip Rev RNA2018
29881994Transcriptome-pathology correlation identifies interplay between TDP-43 and the expression of its kinase CK1E in sporadic ALS.Acta Neuropathol2018
28925356The <i>C. elegans</i> neural editome reveals an ADAR target mRNA required for proper chemotaxis.Elife2017
28188128Interaction Landscape of Inherited Polymorphisms with Somatic Events in Cancer.Cancer Discov2017
27775709RNA-binding protein CPEB1 remodels host and viral RNA landscapes.Nat Struct Mol Biol2016
25826568Noncoding regions of C. elegans mRNA undergo selective adenosine to inosine deamination and contain a small number of editing sites per transcript.RNA Biol2015
24508457The dsRBP and inactive editor ADR-1 utilizes dsRNA binding to regulate A-to-I RNA editing across the C. elegans transcriptome.Cell Rep2014
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Collaborators

Gene W Yeo
University of California
Co-authored papers 17
Eric L Van Nostrand
University of California
Co-authored papers 4
Shashank Sathe
University of California, USA Institute for Genomic Medicine
Co-authored papers 3
Rafael Bejar
Moores Cancer Center, university of california san diego
Co-authored papers 2
Stefan Aigner
University of California San Diego
Co-authored papers 2
Priscilla D Negraes
Department of Pediatrics/Rady Children's Hospital, University of California San Diego
Co-authored papers 1
Kathleen M Fisch
Center for Computational Biology and Bioinformatics, University of California
Co-authored papers 1
Allen Wang
Center for Epigenomics, University of California San Diego School of Medicine
Co-authored papers 1
Deborah H Spector
Co-authored papers 1
Xiang-Dong Fu
Co-authored papers 1
Xingyu Wu
Moores Cancer Center, University of California San Diego
Co-authored papers 1
Isaac A Chaim
University of California San Diego
Co-authored papers 1
Andrew M Gross
Illumina Inc.
Co-authored papers 1
James Jensen
University of California San Diego
Co-authored papers 1
Beth Shapiro
Co-authored papers 1
Dinh Diep
Co-authored papers 1
Daniel A Pollyea
University of Colorado Division of Hematology
Co-authored papers 1
Jason F Kreisberg
University of California San Diego
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Jorge Silvio Gutkind
Moores Cancer Center, University of California San Diego
Co-authored papers 1
Matthew J Walter
Washington University School of Medicine in St. Louis
Co-authored papers 1
Veronica Clavijo Jordan
Harvard Medical School
Co-authored papers 1
Cleber A Trujillo
Department of Pediatrics/Rady Children's Hospital, University of California San Diego
Co-authored papers 1
Hui Huang
Co-authored papers 1
Richard E Green
Co-authored papers 1
Justin Buchanan
Center for Epigenomics & Department of Cellular & Molecular Medicine.
Co-authored papers 1
Steven M Blue
University of California San Diego
Co-authored papers 1
Stephen J Elledge
Howard Hughes Medical Institute, Brigham and Women's Hospital, Harvard Medical School
Co-authored papers 1
Douglas B Rusch
Center for Genomics and Bioinformatics, Indiana University
Co-authored papers 1
Christopher DeBoever
Stanford University
Co-authored papers 1
Kun Zhang
China Pharmaceutical University
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Release 1.2