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Author Details

Shuai Weng
Stanford University
1993
39
26
PMIDPaper TitleJournal TitlePublished Year
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
36607068Saccharomyces genome database update: server architecture, pan-genome nomenclature, and external resources.Genetics2023
34897464New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources.Genetics2022
31612944Transcriptome visualization and data availability at the Saccharomyces Genome Database.Nucleic Acids Res2020
29140510Saccharomyces genome database informs human biology.Nucleic Acids Res2018
29688362Updated regulation curation model at the Saccharomyces Genome Database.Database (Oxford)2018
28365727Curated protein information in the Saccharomyces genome database.Database (Oxford)2017
26989152From one to many: expanding the Saccharomyces cerevisiae reference genome panel.Database (Oxford)2016
26578556The Saccharomyces Genome Database Variant Viewer.Nucleic Acids Res2016
27252399Integration of new alternative reference strain genome sequences into the Saccharomyces genome database.Database (Oxford)2016
24265222Saccharomyces genome database provides new regulation data.Nucleic Acids Res2014
24374639The reference genome sequence of Saccharomyces cerevisiae: then and now.G3 (Bethesda)2014
23161678Gene Ontology annotations and resources.Nucleic Acids Res2013
22110037Saccharomyces Genome Database: the genomics resource of budding yeast.Nucleic Acids Res2012
22955989Annotation of functional variation in personal genomes using RegulomeDB.Genome Res2012
19906697Saccharomyces Genome Database provides mutant phenotype data.Nucleic Acids Res2010
17982175Gene Ontology annotations at SGD: new data sources and annotation methods.Nucleic Acids Res2008
17142221Expanded protein information at SGD: new pages and proteome browser.Nucleic Acids Res2007
16381907Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome.Nucleic Acids Res2006
16381920Tetrahymena Genome Database (TGD): a new genomic resource for Tetrahymena thermophila research.Nucleic Acids Res2006
15608219Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD).Nucleic Acids Res2005
15980466PatMatch: a program for finding patterns in peptide and nucleotide sequences.Nucleic Acids Res2005
14681421Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.Nucleic Acids Res2004
15297299GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes.Bioinformatics2004
15153302Saccharomyces genome database: underlying principles and organisation.Brief Bioinform2004
12519985Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins.Nucleic Acids Res2003
11752257Saccharomyces Genome Database (SGD) provides secondary gene annotation using the Gene Ontology (GO).Nucleic Acids Res2002
12073322Saccharomyces Genome Database.Methods Enzymol2002
11125055Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data.Nucleic Acids Res2001
11125075The Stanford Microarray Database.Nucleic Acids Res2001
10592186Integrating functional genomic information into the Saccharomyces genome database.Nucleic Acids Res2000
9847146Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure.Nucleic Acids Res1999
9847147Unified display of Arabidopsis thaliana physical maps from AtDB, the A.thaliana database.Nucleic Acids Res1999
9841422Genome maps 9. Arabidopsis thaliana. Wall chart.Science1998
9851918Comparison of the complete protein sets of worm and yeast: orthology and divergence.Science1998
9399805AtDB, the Arabidopsis thaliana database, and graphical-web-display of progress by the Arabidopsis Genome Initiative.Nucleic Acids Res1998
9399804SGD: Saccharomyces Genome Database.Nucleic Acids Res1998
9169866Genetic and physical maps of Saccharomyces cerevisiae.Nature1997
12345193An analysis of infant mortality in China.Chin J Popul Sci1993
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Collaborators

J Michael Cherry
Stanford University
Co-authored papers 35
Gail Binkley
Stanford University
Co-authored papers 23
Stacia R Engel
Stanford University
Co-authored papers 22
Selina S Dwight
Stanford University School of Medicine
Co-authored papers 20
Robert S Nash
Stanford University
Co-authored papers 20
David Botstein
Calico Life Sciences LLC
Co-authored papers 18
Marek S Skrzypek
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Co-authored papers 16
Edith D Wong
Stanford University
Co-authored papers 15
Dianna G Fisk
Stanford Medicine Clinical Genomics Program
Co-authored papers 14
Kara Dolinski
Lewis-Sigler Institute for Integrative Genomics, Princeton University
Co-authored papers 14
Maria C Costanzo
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Kalpana Karra
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Karen R Christie
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Stuart R Miyasato
Stanford University
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Mark Schroeder
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Eurie L Hong
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Catherine A Ball
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Jodi E Hirschman
Broad Institute of MIT and Harvard
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Julie Park
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Midori A Harris
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Chandra L Theesfeld
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Rose Oughtred
Lewis-Sigler Institute for Integrative Genomics, Princeton University
Co-authored papers 5
Seung Y Rhee
Carnegie Institution for Science
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Stephen A Chervitz
Stanford University
Co-authored papers 3
Tanya Z Berardini
Carnegie Institution for Science
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Becket Feierbach
Gilead Sciences Inc.
Co-authored papers 2
Petra Fey
Center for Genetic Medicine, Northwestern University.
Co-authored papers 2
Release 1.2