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Author Details

Dmitry Meleshko
Englander Institute for Precision Medicine, The Meyer Cancer Center
2017
15
10
PMIDPaper TitleJournal TitlePublished Year
36959322Cue: a deep-learning framework for structural variant discovery and genotyping.Nat Methods2023
37626951Benchmarking State-of-the-Art Approaches for Norovirus Genome Assembly in Metagenome Sample.Biology (Basel)2023
37546844cloudrnaSPAdes: Isoform assembly using bulk barcoded RNA sequencing data.bioRxiv2023
37641111Ariadne: synthetic long read deconvolution using assembly graphs.Genome Biol2023
35082445Petabase-scale sequence alignment catalyses viral discovery.Nature2022
34406356coronaSPAdes: from biosynthetic gene clusters to RNA viral assemblies.Bioinformatics2021
33719168A Deep Learning Approach to Diagnostic Classification of Prostate Cancer Using Pathology-Radiology Fusion.J Magn Reson Imaging2021
33795001A comprehensive metagenomics framework to characterize organisms relevant for planetary protection.Microbiome2021
33712587Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.Nat Commun2021
32511352Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions.bioRxiv2020
32559359Using SPAdes De Novo Assembler.Curr Protoc Bioinformatics2020
30523036Minerva: an alignment- and reference-free approach to deconvolve Linked-Reads for metagenomics.Genome Res2019
31160374BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs.Genome Res2019
29795809American Gut: an Open Platform for Citizen Science Microbiome Research.mSystems2018
28298430metaSPAdes: a new versatile metagenomic assembler.Genome Res2017
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Feil Family Brain and Mind Research Institute.
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Pavel A Pevzner
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Kiran Garimella
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Dan Knights
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Charles Y Chiu
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Bilal Chughtai
New York Presbyterian Hospital-Weill Cornell
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Justine W Debelius
Karolinska Institutet
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Dianna L Ng
Memorial Sloan Kettering Cancer Center
Co-authored papers 1
Jeffrey A Rosenfeld
Cancer Institute of New Jersey
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Stefan Janssen
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Rob Knight
University of California
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