Author details

Full Name

Roger Higdon

Affiliation

ORCID

Career Start Year

2001

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
28248256	Integrated Proteomic and Transcriptomic-Based Approaches to Identifying Signature Biomarkers and Pathways for Elucidation of Daoy and UW228 Subtypes.	Proteomes	2017
26681951	Dynamic Proteomic Analysis of Pancreatic Mesenchyme Reveals Novel Factors That Enhance Human Embryonic Stem Cell to Pancreatic Cell Differentiation.		2016
27441585	A Case Study: Analyzing City Vitality with Four Pillars of Activity-Live, Work, Shop, and Play.	Big Data	2016
26575978	Finding Text-Supported Gene-to-Disease Co-appearances with MOPED-Digger.	OMICS	2015
25877823	Can "normal" protein expression ranges be estimated with high-throughput proteomics?	Journal of Proteome Research	2015
25831060	The promise of multi-omics and clinical data integration to identify and target personalized healthcare approaches in autism spectrum disorders.	OMICS	2015
25404128	Beyond protein expression, MOPED goes multi-omics.	Nucleic Acids Res	2015
25530493	Comparison of proteomic and metabolomic profiles of mutants of the mitochondrial respiratory chain in Caenorhabditis elegans.	Mitochondrion	2015
24910945	MOPED 2.5--an integrated multi-omics resource: multi-omics profiling expression database now includes transcriptomics data.	OMICS	2014
25313296	Optimizing high performance computing workflow for protein functional annotation.	Concurrency Computation Practice and Experience	2014
25353146	Biomarker differences between cadaveric grafts used in human orthotopic liver transplantation as identified by coulometric electrochemical array detection (CEAD) metabolomics.	OMICS A Journal of Integrative Biology	2014
24456465	Toward more transparent and reproducible omics studies through a common metadata checklist and data publications.	OMICS	2014
24350770	MOPED enables discoveries through consistently processed proteomics data.	J Proteome Res	2014
24958148	Integrative analysis of longitudinal metabolomics data from a personal multi-omics profile.	Metabolites	2013
27447256	Predictive Analytics In Healthcare: Medications as a Predictor of Medical Complexity.	Big Data	2013
27447251	Toward More Transparent and Reproducible Omics Studies Through a Common Metadata Checklist and Data Publications.	Big Data	2013
27447037	Unraveling the Complexities of Life Sciences Data.	Big Data	2013
23516350	Differential expression analysis for pathways.	PLoS Computational Biology	2013
22139914	MOPED: Model Organism Protein Expression Database.	Nucleic Acids Research	2012
21609792	SPIRE: Systematic protein investigative research environment.	J Proteomics	2011
21476840	Bioinformatics and data-intensive scientific discovery in the beginning of the 21st century.	OMICS	2011
21256093	Competition between PARP-1 and Ku70 control the decision between high-fidelity and mutagenic DNA repair.		2011
21250827	Design and initial characterization of the SC-200 proteomics standard mixture.	OMICS	2011
21059987	Temporoparietal hypometabolism in frontotemporal lobar degeneration and associated imaging diagnostic errors.	Arch Neurol	2011
21809957	Classifying proteins into functional groups based on all-versus-all BLAST of 10 million proteins.	OMICS A Journal of Integrative Biology	2011
21718813	IPM: An integrated protein model for false discovery rate estimation and identification in high-throughput proteomics.	J Proteomics	2011
20237650	Interplay of heritage and habitat in the distribution of bacterial signal transduction systems.	Molecular BioSystems	2010
25101328	Modeling sequence and function similarity between proteins for protein functional annotation.		2010
20808949	The United States of America and scientific research.	PLoS One	2010
21304708	Quantifying protein function specificity in the gene ontology.	Standards in Genomic Sciences	2010
21068002	The necessity of adjusting tests of protein category enrichment in discovery proteomics.		2010
21149812	Validation of consensus panel diagnosis in dementia.	Arch Neurol	2010
20391536	Estimating false discovery rates for peptide and protein identification using randomized databases.	Proteomics	2010
20569183	Meta-analysis for protein identification: a case study on yeast data.	OMICS A Journal of Integrative Biology	2010
19844580	A statistical model of protein sequence similarity and function similarity reveals overly-specific function predictions.	PLoS ONE	2009
19376612	Neuropathology of nondemented aging: presumptive evidence for preclinical Alzheimer disease.	Neurobiol Aging	2009
18852243	Staphylococcus aureus elicits marked alterations in the airway proteome during early pneumonia.	Infection and Immunity	2008
18195024	Host airway proteins interact with Staphylococcus aureus during early pneumonia.	Infection and Immunity	2008
18424815	A note on the false discovery rate and inconsistent comparisons between experiments.		2008
18687039	Validating annotations for uncharacterized proteins in Shewanella oneidensis.	OMICS	2008
18092908	Experiment-specific estimation of peptide identification probabilities using a randomized database.	OMICS A Journal of Integrative Biology	2007
17704526	FDG-PET improves accuracy in distinguishing frontotemporal dementia and Alzheimer's disease.	Brain	2007
17890649	Development of BIATECH-54 standard mixtures for assessment of protein identification and relative expression.	Proteomics	2007
17121779	A predictive model for identifying proteins by a single peptide match.		2007
16603360	Protein identification and expression analysis using mass spectrometry.	Trends in Microbiology	2006
16242812	Gene expression correlates of neurofibrillary tangles in Alzheimer's disease.	Neurobiol Aging	2006
16901220	Experimental standards for high-throughput proteomics.	OMICS A Journal of Integrative Biology	2006
16402894	Randomized sequence databases for tandem mass spectrometry peptide and protein identification.	OMICS A Journal of Integrative Biology	2005
15883265	Earlier onset of Alzheimer disease symptoms in latino individuals compared with anglo individuals.	Arch Neurol	2005
15684069	Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations.	Proc Natl Acad Sci U S A	2005