Author details

Full Name

Shulan Tian

Affiliation

ORCID

Career Start Year

2000

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36852272	Apolipoprotein H induces sex-specific steatohepatitis and gut dysbiosis during chronic hepatitis B infection.		2023
36821432	The development of a rapid patient-derived xenograft model to predict chemotherapeutic drug sensitivity/resistance in malignant glial tumors.	Neuro Oncol	2023
34806797	Differential transcriptomic profiling in ibrutinib-naÃ¯ve versus ibrutinib-resistant Richter syndrome.	Hematol Oncol	2022
35882836	Distribution of clonal hematopoiesis of indeterminate potential (CHIP) is not associated with race in patients with plasma cell neoplasms.	Blood Cancer J	2022
35432455	Editorial: Clinical Genome Sequencing: Bioinformatics Challenges and Key Considerations.	Front Genet	2022
35915159	EGFR ligand shifts the role of EGFR from oncogene to tumour suppressor in EGFR-amplified glioblastoma by suppressing invasion through BIN3 upregulation.	Nat Cell Biol	2022
34918030	Shared brain transcriptomic signature in TDP-43 type A FTLD patients with or without GRN mutations.	Brain	2022
35231103	RBBP4-p300 axis modulates expression of genes essential for cell survival and is a potential target for therapy in glioblastoma.	Neuro-Oncology	2022
33829662	Genetic variants related to successful migraine prophylaxis with verapamil.	Mol Genet Genomic Med	2021
33859327	Epigenetic alteration contributes to the transcriptional reprogramming in T-cell prolymphocytic leukemia.	Sci Rep	2021
34050676	Heterogeneous delivery across the blood-brain barrier limits the efficacy of an EGFR-targeting antibody drug conjugate in glioblastoma.	Neuro Oncol	2021
32744316	Chronic lymphocytic leukemia (CLL) risk is mediated by multiple enhancer variants within CLL risk loci.	Human Molecular Genetics	2020
31852831	Genomic and Phenotypic Characterization of a Broad Panel of Patient-Derived Xenografts Reflects the Diversity of Glioblastoma.	Clin Cancer Res	2020
31594729	Automated applicator digitization for high-dose-rate cervix brachytherapy using image thresholding and density-based clustering.	Brachytherapy	2020
32393731	Direct to Drug screening as a precision medicine tool in multiple myeloma.	Blood Cancer Journal	2020
32279347	Tumor mutational load predicts time to first treatment in chronic lymphocytic leukemia (CLL) and monoclonal B-cell lymphocytosis beyond the CLL international prognostic index.	Am J Hematol	2020
32523802	HLA class-I and class-II restricted neoantigen loads predict overall survival in breast cancer.	Oncoimmunology	2020
31101622	Recurrent <i>MSC</i> <sup>E116K</sup> mutations in ALK-negative anaplastic large cell lymphoma.	Blood	2019
31594549	Extensive transcriptomic study emphasizes importance of vesicular transport in C9orf72 expansion carriers.	Acta Neuropathol Commun	2019
31031124	Pathogenic Germ Line Variants in a Patient With Severe Toxicity From Breast Radiotherapy.	Clinical Breast Cancer	2019
30739198	Genome-wide analyses as part of the international FTLD-TDP whole-genome sequencing consortium reveals novel disease risk factors and increases support for immune dysfunction in FTLD.	Acta Neuropathol	2019
30943272	Identification of factors associated with duplicate rate in ChIP-seq data.	PLoS One	2019
30723695	PARP Inhibitors for Sensitization of Alkylation Chemotherapy in Glioblastoma: Impact of Blood-Brain Barrier and Molecular Heterogeneity.	Frontiers in Oncology	2018
28407084	Comparative analysis of de novo assemblers for variation discovery in personal genomes.	Brief Bioinform	2018
29970480	Efficacy of the MDM2 Inhibitor SAR405838 in Glioblastoma Is Limited by Poor Distribution Across the Blood-Brain Barrier.	Mol Cancer Ther	2018
29762141	PD-1 Expression in Chronic Lymphocytic Leukemia/Small Lymphocytic Lymphoma (CLL/SLL) and Large B-cell Richter Transformation (DLBCL-RT): A Characteristic Feature of DLBCL-RT and Potential Surrogate Marker for Clonal Relatedness.	Am J Surg Pathol	2018
29661148	Identification of missing variants by combining multiple analytic pipelines.	BMC Bioinformatics	2018
28575217	Comprehensive Platelet Phenotypic Laboratory Testing and Bleeding History Scoring for Diagnosis of Suspected Hereditary Platelet Disorders: A Single-Institution Experience.	American Journal of Clinical Pathology	2017
28424162	Pembrolizumab in patients with CLL and Richter transformation or with relapsed CLL.	Blood	2017
28939884	PRC2 specifies ectoderm lineages and maintains pluripotency in primed but not naÃ¯ve ESCs.	Nature Communications	2017
27716037	Impact of post-alignment processing in variant discovery from whole exome data.	BMC Bioinformatics	2016
26721890	Genome-Wide Epigenetic Studies in Human Disease: A Primer on -Omic Technologies.	American Journal of Epidemiology	2016
27319740	ChIP-seq in studying epigenetic mechanisms of disease and promoting precision medicine: progresses and future directions.	Epigenomics	2016
27590916	An analytical workflow for accurate variant discovery in highly divergent regions.	BMC Genomics	2016
25847007	EBSeq-HMM: a Bayesian approach for identifying gene-expression changes in ordered RNA-seq experiments.	Bioinformatics	2015
24558366	Conserved transcriptional regulatory programs underlying rice and barley germination.	PLoS ONE	2014
23505351	Comparative RNA-seq analysis in the unsequenced axolotl: the oncogene burst highlights early gene expression in the blastema.	PLoS Comput Biol	2013
23664764	Epigenomic analysis of multilineage differentiation of human embryonic stem cells.	Cell	2013
22213079	Protein kinase C mediated extraembryonic endoderm differentiation of human embryonic stem cells.	Stem Cells	2012
22981233	Identification of the hemogenic endothelial progenitor and its direct precursor in human pluripotent stem cell differentiation cultures.	Cell Reports	2012
21983960	Proteomic and phosphoproteomic comparison of human ES and iPS cells.	Nat Methods	2011
21296996	Efficient generation of transgene-free induced pluripotent stem cells from normal and neoplastic bone marrow and cord blood mononuclear cells.	Blood	2011
21678528	Optic vesicle-like structures derived from human pluripotent stem cells facilitate a customized approach to retinal disease treatment.	Stem Cells	2011
21112566	A mesoderm-derived precursor for mesenchymal stem and endothelial cells.		2010
19325077	Human induced pluripotent stem cells free of vector and transgene sequences.	Science	2009
18682241	NANOG is a direct target of TGFbeta/activin-mediated SMAD signaling in human ESCs.		2008
18385155	A study of the relationships between oligonucleotide properties and hybridization signal intensities from NimbleGen microarray datasets.	Nucleic Acids Res	2008
18371364	Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells.	Cell Stem Cell	2007
18029452	Induced pluripotent stem cell lines derived from human somatic cells.	Science	2007
16877494	Genomic and genetic characterization of rice Cen3 reveals extensive transcription and evolutionary implications of a complex centromere.	Plant Cell	2006