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Author Details

John L Markley
University of Wisconsin-Madison
1967
490
70
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37354977Inadequate Niacin Intake Disrupts Growth and Retinol Homeostasis Resulting in Higher Liver and Lower Serum Retinol Concentrations in Male Rats.J Nutr2023
36081577POKY software tools encapsulating assignment strategies for solution and solid-state protein NMR data.J Struct Biol X2022
36135853ssPINE: Probabilistic Algorithm for Automated Chemical Shift Assignment of Solid-State NMR Data from Complex Protein Systems.Membranes (Basel)2022
32926121CHESPA/CHESCA-SPARKY: automated NMR data analysis plugins for SPARKY to map protein allostery.Bioinformatics2021
34502039Coordination of Di-Acetylated Histone Ligands by the ATAD2 Bromodomain.Int J Mol Sci2021
34004411iPick: Multiprocessing software for integrated NMR signal detection and validation.J Magn Reson2021
33950382The Protein Data Bank Archive.Methods Mol Biol2021
32151725ISCU interacts with NFU1, and ISCU[4Fe-4S] transfers its Fe-S cluster to NFU1 leading to the production of holo-NFU1.J Struct Biol2020
31930377PISA-SPARKY: an interactive SPARKY plugin to analyze oriented solid-state NMR spectra of helical membrane proteins.Bioinformatics2020
31895554Templated Collagen "Double Helices" Maintain Their Structure.J Am Chem Soc2020
32102223Metabolic Changes in Synaptosomes in an Animal Model of Schizophrenia Revealed by <sup>1</sup>H and <sup>1</sup>H,<sup>13</sup>C NMR Spectroscopy.Metabolites2020
32006287BioMagResBank (BMRB) as a Resource for Structural Biology.Methods Mol Biol2020
32913056Uncovering a membrane-distal conformation of KRAS available to recruit RAF to the plasma membrane.Proc Natl Acad Sci U S A2020
32620933Probabilistic identification of saccharide moieties in biomolecules and their protein complexes.Sci Data2020
32446802Fragment screening targeting Ebola virus nucleoprotein C-terminal domain identifies lead candidates.Antiviral Res2020
32391122The cytotoxicity of gallium maltolate in glioblastoma cells is enhanced by metformin through combined action on mitochondrial complex 1.Oncotarget2020
30580387NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments.J Biomol NMR2019
31780431Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures.Structure2019
31819058Solution structure of human myeloid-derived growth factor suggests a conserved function in the endoplasmic reticulum.Nat Commun2019
31463858Tools for Enhanced NMR-Based Metabolomics Analysis.Methods Mol Biol2019
30988261Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB).Acta Crystallogr D Struct Biol2019
30778259Automated evaluation of consistency within the PubChem Compound database.Sci Data2019
31091298Structure and evolution of the 4-helix bundle domain of Zuotin, a J-domain protein co-chaperone of Hsp70.PLoS One2019
31004454Function and solution structure of the Arabidopsis thaliana RALF8 peptide.Protein Sci2019
31165321I-PINE web server: an integrative probabilistic NMR assignment system for proteins.J Biomol NMR2019
31164776Author Correction: Mitochondrial metabolism promotes adaptation to proteotoxic stress.Nat Chem Biol2019
31133756Mitochondrial metabolism promotes adaptation to proteotoxic stress.Nat Chem Biol2019
31076990Backbone resonance assignments and secondary structure of Ebola nucleoprotein 600-739 construct.Biomol NMR Assign2019
29198567Conserved Lipid and Small-Molecule Modulation of COQ8 Reveals Regulation of the Ancient Kinase-like UbiB Family.Cell Chem Biol2018
30081441Probing Protein-Protein Interactions Using Asymmetric Labeling and Carbonyl-Carbon Selective Heteronuclear NMR Spectroscopy.Molecules2018
30125102Applications of Parametrized NMR Spin Systems of Small Molecules.Anal Chem2018
29983374Architectural Features of Human Mitochondrial Cysteine Desulfurase Complexes from Crosslinking Mass Spectrometry and Small-Angle X-Ray Scattering.Structure2018
30200358NMR as a Tool to Investigate the Processes of Mitochondrial and Cytosolic Iron-Sulfur Cluster Biosynthesis.Molecules2018
30617823Current Solution NMR Techniques for Structure-Function Studies of Proteins and RNA Molecules.Adv Exp Med Biol2018
30617821View from Nuclear Magnetic Resonance Spectroscopy.Adv Exp Med Biol2018
29576242Interactions of iron-bound frataxin with ISCU and ferredoxin on the cysteine desulfurase complex leading to Fe-S cluster assembly.J Inorg Biochem2018
29688351Worldwide Protein Data Bank biocuration supporting open access to high-quality 3D structural biology data.Database (Oxford)2018
29406711ISCU(M108I) and ISCU(D39V) Differ from Wild-Type ISCU in Their Failure To Form Cysteine Desulfurase Complexes Containing Both Frataxin and Ferredoxin.Biochemistry2018
29514073Caloric Restriction Engages Hepatic RNA Processing Mechanisms in Rhesus Monkeys.Cell Metab2018
29281006PINE-SPARKY.2 for automated NMR-based protein structure research.Bioinformatics2018
29274980Lactobacillus demonstrate thiol-independent metabolism of methylglyoxal: Implications toward browning prevention in Parmesan cheese.J Dairy Sci2018
27580257The future of NMR-based metabolomics.Curr Opin Biotechnol2017
28486539Relationship between recombinant protein expression and host metabolome as determined by two-dimensional NMR spectroscopy.PLoS One2017
28190782OneDep: Unified wwPDB System for Deposition, Biocuration, and Validation of Macromolecular Structures in the PDB Archive.Structure2017
28495511Biomolecular NMR: Past and future.Arch Biochem Biophys2017
28233492Mitochondrial Cysteine Desulfurase and ISD11 Coexpressed in Escherichia coli Yield Complex Containing Acyl Carrier Protein.ACS Chem Biol2017
29084221Broadening the functionality of a J-protein/Hsp70 molecular chaperone system.PLoS Genet2017
29058410Spin System Modeling of Nuclear Magnetic Resonance Spectra for Applications in Metabolomics and Small Molecule Screening.Anal Chem2017
29174494Validation of Structures in the Protein Data Bank.Structure2017
29144418NMR-Based Identification of Metabolites in Polar and Non-Polar Extracts of Avian Liver.Metabolites2017
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Collaborators

Eldon L Ulrich
University of Wisconsin-Madison
Co-authored papers 48
Brian G Fox
University of Wisconsin-Madison
Co-authored papers 28
Helen M Berman
The State University of New Jersey
Co-authored papers 26
Haruki Nakamura
Institute for Protein Research, Osaka University
Co-authored papers 21
George N Phillips
Rice University
Co-authored papers 17
Gerard J Kleywegt
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 17
Stephen K Burley
The State University of New Jersey
Co-authored papers 14
Sameer Velankar
European Bioinformatics Institute
Co-authored papers 13
John D Westbrook
The State University of New Jersey
Co-authored papers 12
Gaetano T Montelione
Rensselaer Polytechnic Institute
Co-authored papers 9
Slobodan Macura
Mayo Clinic
Co-authored papers 8
Kim Henrick
The State University of New Jersey
Co-authored papers 6
Zukang Feng
The State University of New Jersey
Co-authored papers 6
Geerten W Vuister
Leicester Institute of Structural and Chemical Biology, University of Leicester
Co-authored papers 6
Jasmine Young
The State University of New Jersey
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Catherine L Lawson
Institute for Quantitative Biomedicine, State University of New Jersey
Co-authored papers 6
Arthur S Edison
Co-authored papers 6
Liya Wang
Henan Eye Hospital and Henan Eye Institute, People's Hospital of Zhengzhou University
Co-authored papers 6
Jeffrey C Hoch
University of Connecticut Health Center
Co-authored papers 6
Robert Kaptein
Utrecht University
Co-authored papers 6
Aleksandras Gutmanas
European Bioinformatics Institute
Co-authored papers 6
Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 5
Genji Kurisu
Institute for Protein Research, Osaka University
Co-authored papers 5
Michael Nilges
Institut Pasteur
Co-authored papers 5
Paul D Adams
Lawrence Berkeley National Laboratory
Co-authored papers 5
Alexandre M J J Bonvin
Bijvoet Center for Biomolecular Research, Utrecht University
Co-authored papers 5
Huanwang Yang
The State University of New Jersey
Co-authored papers 5
Ronald T Raines
Massachusetts Institute of Technology
Co-authored papers 5
Ad Bax
National Institutes of Health
Co-authored papers 5
Torsten Schwede
University of Basel
Co-authored papers 4
Release 1.2