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Author Details

Fang-Xiang Wu
University of Saskatchewan
2004
256
35
Aidong Zhang (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
38096101OIF-Net: An Optical Flow Registration-Based PET/MR Cross-Modal Interactive Fusion Network for Low-Count Brain PET Image Denoising.IEEE Trans Med Imaging2024
34914594NMTF-DTI: A Nonnegative Matrix Tri-factorization Approach With Multiple Kernel Fusion for Drug-Target Interaction Prediction.IEEE/ACM Trans Comput Biol Bioinform2023
38019798Traditional Chinese Medicine studies for Alzheimer's disease via network pharmacology based on entropy and random walk.PLoS One2023
37315825A posterior probability based Bayesian method for single-cell RNA-seq data imputation.Methods2023
37374757PreOBP_ML: Machine Learning Algorithms for Prediction of Optical Biosensor Parameters.Micromachines (Basel)2023
36458923DeepCellEss: cell line-specific essential protein prediction with attention-based interpretable deep learning.Bioinformatics2023
36821425CLAIRE: contrastive learning-based batch correction framework for better balance between batch mixing and preservation of cellular heterogeneity.Bioinformatics2023
32310779Predicting Drug-Drug Interactions Based on Integrated Similarity and Semi-Supervised Learning.IEEE/ACM Trans Comput Biol Bioinform2022
35430042Chinese clinical named entity recognition via multi-head self-attention based BiLSTM-CRF.Artif Intell Med2022
35862409NTD-DR: Nonnegative tensor decomposition for drug repositioning.PLoS One2022
35620297Drug Repositioning with GraphSAGE and Clustering Constraints Based on Drug and Disease Networks.Front Pharmacol2022
36299898Hybrid_DBP: Prediction of DNA-binding proteins using hybrid features and convolutional neural networks.Front Pharmacol2022
33577455A Dual Ranking Algorithm Based on the Multiplex Network for Heterogeneous Complex Disease Analysis.IEEE/ACM Trans Comput Biol Bioinform2022
34953465An integrated brain-specific network identifies genes associated with neuropathologic and clinical traits of Alzheimer's disease.Brief Bioinform2022
34856391CircR2Disease v2.0: An Updated Web Server for Experimentally Validated circRNA-disease Associations and Its Application.Genomics Proteomics Bioinformatics2022
35150255PDMDA: predicting deep-level miRNA-disease associations with graph neural networks and sequence features.Bioinformatics2022
35275996HyMM: hybrid method for disease-gene prediction by integrating multiscale module structure.Brief Bioinform2022
35136949Biomedical data, computational methods and tools for evaluating disease-disease associations.Brief Bioinform2022
34864856Predicting drug-drug interactions by graph convolutional network with multi-kernel.Brief Bioinform2022
35323901MLRDFM: a multi-view Laplacian regularized DeepFM model for predicting miRNA-disease associations.Brief Bioinform2022
34498677DeepLncLoc: a deep learning framework for long non-coding RNA subcellular localization prediction based on subsequence embedding.Brief Bioinform2022
34364986NetAUC: A network-based multi-biomarker identification method by AUC optimization.Methods2022
33956632Drug-Target Interaction Prediction Using Multi-Head Self-Attention and Graph Attention Network.IEEE/ACM Trans Comput Biol Bioinform2022
34111017Predicting miRNA-Disease Associations Based On Multi-View Variational Graph Auto-Encoder With Matrix Factorization.IEEE J Biomed Health Inform2022
33035155NIMCE: A Gene Regulatory Network Inference Approach Based on Multi Time Delays Causal Entropy.IEEE/ACM Trans Comput Biol Bioinform2022
33471766An Ensemble Hybrid Feature Selection Method for Neuropsychiatric Disorder Classification.IEEE/ACM Trans Comput Biol Bioinform2022
33417563DPCMNE: Detecting Protein Complexes From Protein-Protein Interaction Networks Via Multi-Level Network Embedding.IEEE/ACM Trans Comput Biol Bioinform2022
32845842Identifying Gene Signatures for Cancer Drug Repositioning Based on Sample Clustering.IEEE/ACM Trans Comput Biol Bioinform2022
30794516An Ensemble Method to Reconstruct Gene Regulatory Networks Based on Multivariate Adaptive Regression Splines.IEEE/ACM Trans Comput Biol Bioinform2021
33828156Mining the plasma-proteome associated genes in patients with gastro-esophageal cancers for biomarker discovery.Sci Rep2021
33681364Identification of Tumor Tissue of Origin with RNA-Seq Data and Using Gradient Boosting Strategy.Biomed Res Int2021
33822883Parallel computing for genome sequence processing.Brief Bioinform2021
33647482SSRE: Cell Type Detection Based on Sparse Subspace Representation and Similarity Enhancement.Genomics Proteomics Bioinformatics2021
33928031Prediction of Target-Drug Therapy by Identifying Gene Mutations in Lung Cancer With Histopathological Stained Image and Deep Learning Techniques.Front Oncol2021
33554238Machine learning approaches for predicting biomolecule-disease associations.Brief Funct Genomics2021
34665747Human Protein Complex-Based Drug Signatures for Personalized Cancer Medicine.IEEE J Biomed Health Inform2021
34020541A survey on predicting microbe-disease associations: biological data and computational methods.Brief Bioinform2021
34070678GATCDA: Predicting circRNA-Disease Associations Based on Graph Attention Network.Cancers (Basel)2021
34214175A sensitive repeat identification framework based on short and long reads.Nucleic Acids Res2021
34152838Essential Protein Prediction Based on node2vec and XGBoost.J Comput Biol2021
34006217Identifying cell types from single-cell data based on similarities and dissimilarities between cells.BMC Bioinformatics2021
31985440A Deep Learning Framework for Gene Ontology Annotations With Sequence- and Network-Based Information.IEEE/ACM Trans Comput Biol Bioinform2021
32070993FUNMarker: Fusion Network-Based Method to Identify Prognostic and Heterogeneous Breast Cancer Biomarkers.IEEE/ACM Trans Comput Biol Bioinform2021
32043521Biomedical data and computational models for drug repositioning: a comprehensive review.Brief Bioinform2021
33434139scASK: A Novel Ensemble Framework for Classifying Cell Types Based on Single-cell RNA-seq Data.IEEE J Biomed Health Inform2021
33367690Improving circRNA-disease association prediction by sequence and ontology representations with convolutional and recurrent neural networks.Bioinformatics2021
33074746Diagnosis of Autism Spectrum Disorder Based on Functional Brain Networks with Deep Learning.J Comput Biol2021
33152756Drug-drug similarity measure and its applications.Brief Bioinform2021
32798654Variational graph auto-encoders for miRNA-disease association prediction.Methods2021
32966552IsoResolve: predicting splice isoform functions by integrating gene and isoform-level features with domain adaptation.Bioinformatics2021
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Collaborators

Xiujuan Lei
Shaanxi Normal University
Co-authored papers 26
Xin Gao
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 2
Jun Huan
Co-authored papers 2
Arnaud Droit
Centre de Recherche du CHU de Quebec-Universite, Universite Laval
Co-authored papers 2
Feng Luo
Clemson University
Co-authored papers 1
Yifeng Li
Digital Technologies Research Centre, National Research Council of Canada
Co-authored papers 1
Habtom W Ressom
Lombardi Comprehensive Cancer Center, Georgetown University
Co-authored papers 1
Huan Li
Shaanxi Normal University
Co-authored papers 1
Yuanfang Guan
University of Michigan ann arbor
Co-authored papers 1
Weijie Chen
Co-authored papers 1
Andrew Freywald
College of Medicine, University of Saskatchewan
Co-authored papers 1
Daifeng Wang
University of Wisconsin-Madison
Co-authored papers 1
Franco J Vizeacoumar
College of Medicine, University of Saskatchewan
Co-authored papers 1
Michael J Dunn
Co-authored papers 1
Alioune Ngom
University of Windsor
Co-authored papers 1
Frederick S Vizeacoumar
College of Medicine, University of Saskatchewan
Co-authored papers 1
Aidong Zhang (CM4AI)
University of Virginia
Co-authored papers 1
Gilbert S Omenn
and School of Public Health, University of Michigan ann arbor
Co-authored papers 1
Release 1.2