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Author Details

Robert M Waterhouse
University of Lausanne
2007
86
41
PMIDPaper TitleJournal TitlePublished Year
37996991Pan-genome analysis highlights the role of structural variation in the evolution and environmental adaptation of Asian honeybees.Mol Ecol Resour2024
36801111How genomics can help biodiversity conservation.Trends Genet2023
37425881Scalable, accessible, and reproducible reference genome assembly and evaluation in Galaxy.bioRxiv2023
36972320Mycobacterium abscessus resists the innate cellular response by surviving cell lysis of infected phagocytes.PLoS Pathog2023
37433931Biodiversity: an atlas of European reference genomes.Nature2023
34053186A targeted amplicon sequencing panel to simultaneously identify mosquito species and Plasmodium presence across the entire Anopheles genus.Mol Ecol Resour2022
35675424Mosquito  saliva enhances virus infection through sialokinin-dependent vascular leakage.Proc Natl Acad Sci U S A2022
35560159CrowdGO: Machine learning and semantic similarity guided consensus Gene Ontology annotation.PLoS Comput Biol2022
35413948Anopheles mosquitoes reveal new principles of 3D genome organization in insects.Nat Commun2022
34983844Convergent evolution of venom gland transcriptomes across Metazoa.Proc Natl Acad Sci U S A2022
35217859Assessing species coverage and assembly quality of rapidly accumulating sequenced genomes.Gigascience2022
35301165Exploring new genomic territories with emerging model insects.Curr Opin Insect Sci2022
35259992Long-distance dispersal of pigeons and doves generated new ecological opportunities for host-switching and adaptive radiation by their parasites.Proc Biol Sci2022
34893861Functional Constraints on Insect Immune System Components Govern Their Evolutionary Trajectories.Mol Biol Evol2022
32946576Genus-Wide Characterization of Bumblebee Genomes Provides Insights into Their Evolution and Variation in Ecological and Behavioral Traits.Mol Biol Evol2021
36303779Summary Visualizations of Gene Ontology Terms With GO-Figure!Front Bioinform2021
33590960RADSex: A computational workflow to study sex determination using restriction site-associated DNA sequencing data.Mol Ecol Resour2021
33750380The genome of the stable fly, Stomoxys calcitrans, reveals potential mechanisms underlying reproduction, host interactions, and novel targets for pest control.BMC Biol2021
34325695Publisher Correction: The genome of the stable fly, Stomoxys calcitrans, reveals potential mechanisms underlying reproduction, host interactions, and novel targets for pest control.BMC Biol2021
34015138Erratum to: Genus-wide characterization of bumblebee genomes provides insights into their evolution and variation in ecological and behavioral traits.Mol Biol Evol2021
33446206Horizontally acquired antibacterial genes associated with adaptive radiation of ladybird beetles.BMC Biol2021
32442304Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera.Genome Biol Evol2020
31969194Gene content evolution in the arthropods.Genome Biol2020
31937263Enhanced genome assembly and a new official gene set for Tribolium castaneum.BMC Genomics2020
31898513Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies.BMC Biol2020
31778187The Genome of the Blind Soil-Dwelling and Ancestrally Wingless Dipluran Campodea augens: A Key Reference Hexapod for Studying the Emergence of Insect Innovations.Genome Biol Evol2020
32105779Hemocyte-targeted gene expression in the female malaria mosquito using the hemolectin promoter from Drosophila.Insect Biochem Mol Biol2020
33198778Correction to: Genome-enabled insights into the biology of thrips as crop pests.BMC Biol2020
33070780Genome-enabled insights into the biology of thrips as crop pests.BMC Biol2020
33148176Four myriapod relatives - but who are sisters? No end to debates on relationships among the four major myriapod subgroups.BMC Evol Biol2020
32874647Brain microRNAs among social and solitary bees.R Soc Open Sci2020
30414111Using BUSCO to Assess Insect Genomic Resources.Methods Mol Biol2019
31537640Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci.Genome Res2019
31477173Comparative genomic analysis of six Glossina genomes, vectors of African trypanosomes.Genome Biol2019
31101123Genomic signatures accompanying the dietary shift to phytophagy in polyphagan beetles.Genome Biol2019
30809249Insights Into an Unexplored Component of the Mosquito Repeatome: Distribution and Variability of Viral Sequences Integrated Into the Genome of the Arboviral Vector <i>Aedes albopictus</i>.Front Genet2019
30391118Of Genes and Genomes: Mosquito Evolution and Diversity.Trends Parasitol2019
30642875Draft Genome Assembly and Population Genetics of an Agricultural Pollinator, the Solitary Alkali Bee (Halictidae: <i>Nomia melanderi</i>).G3 (Bethesda)2019
29220515BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics.Mol Biol Evol2018
30478043Phylogenomics and the evolution of hemipteroid insects.Proc Natl Acad Sci U S A2018
30335145Genome Sequence of the Wheat Stem Sawfly, Cephus cinctus, Representing an Early-Branching Lineage of the Hymenoptera, Illuminates Evolution of Hymenopteran Chemoreceptors.Genome Biol Evol2018
27899580OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs.Nucleic Acids Res2017
28137743Genomic Features of the Damselfly Calopteryx splendens Representing a Sister Clade to Most Insect Orders.Genome Biol Evol2017
28985367The Novel Evolution of the Sperm Whale Genome.Genome Biol Evol2017
28747381Rapid evolution of female-biased genes among four species of <i>Anopheles</i> malaria mosquitoes.Genome Res2017
26836814Unique features of a global human ectoparasite identified through sequencing of the bed bug genome.Nat Commun2016
27695689Tick Genome Assembled: New Opportunities for Research on Tick-Host-Pathogen Interactions.Front Cell Infect Microbiol2016
27604222Evolutionary Dynamics of Abundant Stop Codon Readthrough.Mol Biol Evol2016
27832824Genome of the Asian longhorned beetle (Anoplophora glabripennis), a globally significant invasive species, reveals key functional and evolutionary innovations at the beetle-plant interface.Genome Biol2016
27522922Multifaceted biological insights from a draft genome sequence of the tobacco hornworm moth, Manduca sexta.Insect Biochem Mol Biol2016
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Collaborators

University of Geneva Medical School
Co-authored papers 26
University of Illinois at Champaign-Urbana
Co-authored papers 18
Baylor College of Medicine
Co-authored papers 13
Baylor College of Medicine
Co-authored papers 13
Baylor College of Medicine
Co-authored papers 13
Baylor College of Medicine
Co-authored papers 12
University of Geneva Medical School
Co-authored papers 11
Wayne State University
Co-authored papers 11
University of Rochester
Co-authored papers 11
Baylor College of Medicine
Co-authored papers 10
USDA-ARS
Co-authored papers 9
Institute of Advanced Energy, Kyoto University
Co-authored papers 9
Baylor College of Medicine
Co-authored papers 9
Department of Biochemistry and the Fralin Life Sciences Institute, Virginia Tech
Co-authored papers 8
The Pennsylvania State University College of Medicine
Co-authored papers 8
University of Copenhagen, Universitetsparken 15
Co-authored papers 8
Baylor College of Medicine
Co-authored papers 8
University of Copenhagen, Universitetsparken 15
Co-authored papers 8
Baylor College of Medicine
Co-authored papers 7
USDA-ARS Bee Research Laboratory
Co-authored papers 7
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 6
USDA Agricultural Research Service
Co-authored papers 6
California State Polytechnic University
Co-authored papers 6
University of Cincinnati College of Medicine
Co-authored papers 6
Baylor College of Medicine
Co-authored papers 6
University of Geneva Medical School
Co-authored papers 6
University of Tennessee Health Science Center
Co-authored papers 6
University of Geneva
Co-authored papers 6
University of Colorado Anschutz Medical Campus
Co-authored papers 6
Institute for Evolution and Biodiversity, University of Munster
Co-authored papers 5