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Author Details

Ming Xiao
Drexel University
1998
51
25
PMIDPaper TitleJournal TitlePublished Year
37372458Single-Molecule Telomere Assay via Optical Mapping (SMTA-OM) Can Potentially Define the ALT Positivity of Cancer.Genes (Basel)2023
35444207Multiplex structural variant detection by whole-genome mapping and nanopore sequencing.Sci Rep2022
31056507Analysis of Subtelomeric REXTAL Assemblies Using QUAST.IEEE/ACM Trans Comput Biol Bioinform2021
34534648Characterization of full-length LINE-1 insertions in 154 genomes.Genomics2021
34232611Multicolor Whole-Genome Mapping in Nanochannels for Genetic Analysis.Anal Chem2021
33310082Single-molecule telomere length characterization by optical mapping in nano-channel array: Perspective and review on telomere length measurement.Environ Toxicol Pharmacol2021
33231685Customized optical mapping by CRISPR-Cas9 mediated DNA labeling with multiple sgRNAs.Nucleic Acids Res2021
32669102Single-molecule analysis of subtelomeres and telomeres in Alternative Lengthening of Telomeres (ALT) cells.BMC Genomics2020
31754017The Driver of Extreme Human-Specific Olduvai Repeat Expansion Remains Highly Active in the Human Genome.Genetics2020
31986135Comprehensive Analysis of Human Subtelomeres by Whole Genome Mapping.PLoS Genet2020
33127893Towards a reference genome that captures global genetic diversity.Nat Commun2020
30833565Genome maps across 26 human populations reveal population-specific patterns of structural variation.Nat Commun2019
31640553Genome rearrangements induce biofilm formation in Escherichia coli C - an old model organism with a new application in biofilm research.BMC Genomics2019
31636335A micropatterned substrate for on-surface enzymatic labelling of linearized long DNA molecules.Sci Rep2019
31416423Evaluating the quality of the 1000 genomes project data.BMC Genomics2019
31481461The 22q11 low copy repeats are characterized by unprecedented size and structural variability.Genome Res2019
32016171REXTAL: Regional Extension of Assemblies Using Linked-Reads.Bioinform Res Appl (2018)2018
29195502OMSV enables accurate and comprehensive identification of large structural variations from nanochannel-based single-molecule optical maps.Genome Biol2017
28172448OMBlast: alignment tool for optical mapping using a seed-and-extend approach.Bioinformatics2017
28180280High-throughput single-molecule mapping links subtelomeric variants and long-range haplotypes with specific telomeres.Nucleic Acids Res2017
29025896High-throughput single-molecule telomere characterization.Genome Res2017
26481349CRISPR-CAS9 D10A nickase target-specific fluorescent labeling of double strand DNA for whole genome mapping and structural variation analysis.Nucleic Acids Res2016
26510793Genome-Wide Structural Variation Detection by Genome Mapping on Nanochannel Arrays.Genetics2016
23405223Rapid genome mapping in nanochannel arrays for highly complete and accurate de novo sequence assembly of the complex Aegilops tauschii genome.PLoS One2013
22698062Multicolor super-resolution DNA imaging for genetic analysis.Nano Lett2012
22797562Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly.Nat Biotechnol2012
21423606Transition between two regimes describing internal fluctuation of DNA in a nanochannel.PLoS One2011
20699272Single molecule linear analysis of DNA in nano-channel labeled with sequence specific fluorescent probes.Nucleic Acids Res2010
19198595Direct determination of haplotypes from single DNA molecules.Nat Methods2009
17175538Rapid DNA mapping by fluorescent single molecule detection.Nucleic Acids Res2007
17943131Genome-wide detection and characterization of positive selection in human populations.Nature2007
17943122A second generation human haplotype map of over 3.1 million SNPs.Nature2007
17443670Determination of haplotypes from single DNA molecules: a method for single-molecule barcoding.Hum Mutat2007
17404718Identification of NR1I2 genetic variation using resequencing.Eur J Clin Pharmacol2007
16288910In vivo expression of a conditional TGF-beta1 transgene: no evidence for TGF-beta1 transgene expression in SM22alpha-tTA transgenic mice.J Mol Cell Cardiol2006
16971459A simple DNA stretching method for fluorescence imaging of single DNA molecules.Nucleic Acids Res2006
16100403Kinetic fluorescence-quenching detection assay for allele frequency estimation.Methods Mol Biol2005
16239245Polymorphism discovery in 51 chemotherapy pathway genes.Hum Mol Genet2005
16224071Regulated transgene expression in vascular smooth muscle.Circ Res2005
15108275Single-molecule analysis for molecular haplotyping.Hum Mutat2004
15310656Role of excess inorganic pyrophosphate in primer-extension genotyping assays.Genome Res2004
15475243Pharmacogenomic assessment of carboxylesterases 1 and 2.Genomics2004
12545559Kinetic FP-TDI assay for SNP allele frequency determination.Biotechniques2003
15338604SNP genotyping and molecular haplotyping of DNA pools.Cold Spring Harb Symp Quant Biol2003
14517965Identification of a frequent variant in ALG6, the cause of Congenital Disorder of Glycosylation-Ic.Hum Mutat2003
12679807An actin-dependent conformational change in myosin.Nat Struct Biol2003
12727909DNA analysis by fluorescence quenching detection.Genome Res2003
11972024Holding two heads together: stability of the myosin II rod measured by resonance energy transfer between the heads.Proc Natl Acad Sci U S A2002
11459485Quantum yields of luminescent lanthanide chelates and far-red dyes measured by resonance energy transfer.J Am Chem Soc2001
10452801A comparison between the sulfhydryl reductants tris(2-carboxyethyl)phosphine and dithiothreitol for use in protein biochemistry.Anal Biochem1999
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Collaborators

Cardiovascular Research Institute, University of California San Francisco
Co-authored papers 29
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Fudan University
Co-authored papers 5
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Center for Precision Medicine and Functional Genomics, Utah Tech University
Co-authored papers 3
Co-authored papers 2
University of Ibadan
Co-authored papers 2
University of Massachusetts Medical School
Co-authored papers 2
Co-authored papers 2
Newcastle University
Co-authored papers 2
Illumina Inc.
Co-authored papers 2
McGill University and Genome Quebec Innovation Centre
Co-authored papers 2
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University of Utah
Co-authored papers 2
William Harvey Research Institute, Queen Mary University of London
Co-authored papers 2
McGill University
Co-authored papers 2
First Hospital of Xingtai
Co-authored papers 2
Harvard Medical School, Vanderbilt University, Yale University Yale Law School
Co-authored papers 2
Wellcome Trust Sanger Institute
Co-authored papers 2
Fudan University
Co-authored papers 2
Adaptive Biotechnologies
Co-authored papers 2
Center for Statistical Genetics, Columbia University Medical Center
Co-authored papers 2
23andMe Inc.
Co-authored papers 2
Center for Cerebrovascular Research
Co-authored papers 2
University of Michigan School of Public Health ann arbor
Co-authored papers 2
Beijing Institute of Genomics, Chinese Academy of Sciences
Co-authored papers 2
Co-authored papers 2
Nanfang Hospital and Basic Medical College, Southern Medical University
Co-authored papers 2
McGill University Health Center
Co-authored papers 2
Co-authored papers 2