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Author Details

Amartya Sanyal
Nanyang Technological University
2007
19
13
Nathan Sheffield (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
35776115SETDB1 acts as a topological accessory to Cohesin via an H3K9me3-independent, genomic shunt for regulating cell fates.Nucleic Acids Res2022
34671179Analysis of Aneuploidy Spectrum From Whole-Genome Sequencing Provides Rapid Assessment of Clonal Variation Within Established Cancer Cell Lines.Cancer Inform2021
32299346Hierarchical discovery of large-scale and focal copy number alterations in low-coverage cancer genomes.BMC Bioinformatics2020
33160308Identification and utilization of copy number information for correcting Hi-C contact map of cancer cell lines.BMC Bioinformatics2020
32469306Spatial inter-centromeric interactions facilitated the emergence of evolutionary new centromeres.Elife2020
31142612Cis- and Trans-chromosomal Interactions Define Pericentric Boundaries in the Absence of Conventional Heterochromatin.Genetics2019
28368037High-resolution RNA allelotyping along the inactive X chromosome: evidence of RNA polymerase III in regulating chromatin configuration.Sci Rep2017
27367781Genetics and Genomics of Longitudinal Lung Function Patterns in Individuals with Asthma.Am J Respir Crit Care Med2016
27168434Patterns of Growth and Decline in Lung Function in Persistent Childhood Asthma.N Engl J Med2016
23706625Architectural protein subclasses shape 3D organization of genomes during lineage commitment.Cell2013
22889292An encyclopedia of mouse DNA elements (Mouse ENCODE).Genome Biol2012
22955621The long-range interaction landscape of gene promoters.Nature2012
22955617The accessible chromatin landscape of the human genome.Nature2012
23137922From cells to chromatin: capturing snapshots of genome organization with 5C technology.Methods2012
21131981The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules.Nat Struct Mol Biol2011
21489772Chromatin globules: a common motif of higher order chromosome structure?Curr Opin Cell Biol2011
21423168A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression.Nature2011
19789528My5C: web tools for chromosome conformation capture studies.Nat Methods2009
17268770Insights into male germ cell apoptosis due to depletion of gonadotropins caused by GnRH antagonists.Apoptosis2007
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Collaborators

Job Dekker
University of Massachusetts Chan Medical School
Co-authored papers 11
Bryan R Lajoie
NASA Ames Research Center
Co-authored papers 9
John A Stamatoyannopoulos
Altius Institute for Biomedical Sciences
Co-authored papers 4
Theresa K Canfield
University of Washington
Co-authored papers 2
Peter J Sabo
University of Washington
Co-authored papers 2
Damien C Croteau-Chonka
Brigham and Women's Hospital and Harvard Medical School
Co-authored papers 2
Gregory E Crawford
Center for Genomic & Computational Biology, Duke University
Co-authored papers 2
Scott T Weiss
Brigham and Women's Hospital, Harvard Medical School
Co-authored papers 2
Michael H Cho
Brigham and Women's Hospital Channing Division of Network Medicine
Co-authored papers 2
Benjamin A Raby
Co-authored papers 2
Richard Sandstrom
Altius Institute for Biomedical Sciences
Co-authored papers 2
Marc A Marti-Renom
Universitat Pompeu Fabra (UPF)
Co-authored papers 2
Edwin K Silverman
Brigham and Women's Hospital
Co-authored papers 2
Peter J Castaldi
Harvard Medical School
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Erika Giste
University of Washington
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Robert E Thurman
University of Washington
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Rajinder Kaul
Altius Institute for Biomedical Sciences
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Vaughn Roach
Co-authored papers 2
Huck-Hui Ng
Co-authored papers 2
Alvin T Kho
Brigham and Women's Hospital, Harvard Medical School, Boston Children's Hospital
Co-authored papers 2
Isaac B Houston
Co-authored papers 2
James Taylor
Johns Hopkins University
Co-authored papers 2
Audra K Johnson
Altius Institute for Biomedical Sciences
Co-authored papers 2
Bum-Kyu Lee
Cancer Research Center, University at Albany, State University of New York
Co-authored papers 1
Deepti Jain
Co-authored papers 1
Michael J Pazin
Co-authored papers 1
Richard Humbert
University of Washington
Co-authored papers 1
Carrie A Davis
Stanford University
Co-authored papers 1
Patrick A Navas
University of Washington
Co-authored papers 1
Jennifer E Phillips-Cremins
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Release 1.2