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Author Details

Vladimir Gligorijevi??
Center for Computational Biology (CCB), Flatiron Institute, Simons Foundation
2010
17
10
PMIDPaper TitleJournal TitlePublished Year
37679542Protein remote homology detection and structural alignment using deep learning.Nat Biotechnol2024
36477794TCRconv: predicting recognition between T cell receptors and epitopes using contextualized motifs.Bioinformatics2023
37010293Comprehensive Functional Annotation of Metagenomes and Microbial Genomes Using a Deep Learning-Based Method.mSystems2023
34039967Structure-based protein function prediction using graph convolutional networks.Nat Commun2021
33576802NetQuilt: deep multispecies network-based protein function prediction using homology-informed network similarity.Bioinformatics2021
29993651Non-Negative Matrix Factorizations for Multiplex Network Analysis.IEEE Trans Pattern Anal Mach Intell2019
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
29868758deepNF: deep network fusion for protein function prediction.Bioinformatics2018
26776197PATIENT-SPECIFIC DATA FUSION FOR CANCER STRATIFICATION AND PERSONALISED TREATMENT.Pac Symp Biocomput2016
26677817Integrative methods for analyzing big data in precision medicine.Proteomics2016
26668003Fuse: multiple network alignment via data fusion.Bioinformatics2016
26490630Methods for biological data integration: perspectives and challenges.J R Soc Interface2015
25161252Integration of molecular network data reconstructs Gene Ontology.Bioinformatics2014
25098752Network wiring of pleiotropic kinases yields insight into protective role of diabetes on aneurysm.Integr Biol (Camb)2014
22677116Autoimmune polyglandular syndrome type 2, alopecia universalis and Crohn's disease.J Crohns Colitis2013
23193108How the online social networks are used: dialogues-based structure of MySpace.J R Soc Interface2013
21066991The role of pelvic MRI in assesment of combined surgical and infliximab treatment for perianal Crohn's disease.Acta Chir Iugosl2010
  • 1 - 17 of 17

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Collaborators

Richard Bonneau
Center for Computational Biology (CCB), Flatiron Institute, Simons Foundation
Co-authored papers 6
Meet Barot
Center for Data Science, New York University
Co-authored papers 3
Ramnik J Xavier
Broad Institute of MIT and Harvard
Co-authored papers 2
Naihui Zhou
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Itamar Borukhov
Institute of Biotechnology, University of Helsinki
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Maria J Martin
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Iowa State University
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Larry Davis
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Radoslav Davidovic
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Mohammad R K Mofrad
University of California Berkeley
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Sa??o D??eroski
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Domenico Cozzetto
Imperial College London
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Marco Mesiti
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Medical University of Lodz
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Alan J Medlar
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Rui Fa
University College London
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Sabeur Aridhi
Universite de Lorraine, CNRS
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Qizhong Mao
Temple University
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Fabio Fabris
University of Kent
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Wei-Cheng Tseng
Taipei Veterans General Hospital
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Christophe Dessimoz
University of Lausanne
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Gage S Black
Brigham Young University
Co-authored papers 1
Suyang Dai
Fudan University
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Maxat Kulmanov
King Abdullah University of Science and Technology.
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Kai Hakala
University of Turku
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Tomislav ??muc
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