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Author Details

J Peter Svensson
Karolinska Institutet
2005
32
18
Trey Ideker (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36561752Natural killer cells induce HIV-1 latency reversal after treatment with pan-caspase inhibitors.Front Immunol2022
35666761T cell stimulation remodels the latently HIV-1 infected cell population by differential activation of proviral chromatin.PLoS Pathog2022
35418589Peripheral blood CD4<sup>+</sup>CCR6<sup>+</sup> compartment differentiates HIV-1 infected or seropositive elite controllers from long-term successfully treated individuals.Commun Biol2022
34026665Targeting Epigenetics to Cure HIV-1: Lessons From (and for) Cancer Treatment.Front Cell Infect Microbiol2021
34417450Histone H4 lysine 20 mono-methylation directly facilitates chromatin openness and promotes transcription of housekeeping genes.Nat Commun2021
31900031A regulatory role for CHD2 in myelopoiesis.Epigenetics2020
31999790Chromatin maturation of the HIV-1 provirus in primary resting CD4+ T cells.PLoS Pathog2020
31575705Chromatin remodeler Fft3 plays a dual role at blocked DNA replication forks.Life Sci Alliance2019
29714165Distinct chromatin functional states correlate with HIV latency reactivation in infected primary CD4<sup>+</sup> T cells.Elife2018
27978436The mTOR Complex Controls HIV Latency.Cell Host Microbe2016
25778913A nucleosome turnover map reveals that the stability of histone H4 Lys20 methylation depends on histone recycling in transcribed chromatin.Genome Res2015
26518661The Paf1 complex factors Leo1 and Paf1 promote local histone turnover to modulate chromatin states in fission yeast.EMBO Rep2015
26321255PARP1- and CTCF-Mediated Interactions between Active and Repressed Chromatin at the Lamina Promote Oscillating Transcription.Mol Cell2015
24531659Centromeric histone H2B monoubiquitination promotes noncoding transcription and chromatin integrity.Nat Struct Mol Biol2014
25431935Epigenetic activation and inactivation of centromeres.Epigenomics2014
23661198Microfluidic genome-wide profiling of intrinsic electrical properties in Saccharomyces cerevisiae.Lab Chip2013
24040048Genomic phenotyping by barcode sequencing broadly distinguishes between alkylating agents, oxidizing agents, and non-genotoxic agents, and reveals a role for aromatic amino acids in cellular recovery after quinone exposure.PLoS One2013
22681890Hierarchical modularity and the evolution of genetic interactomes across species.Mol Cell2012
23028377Factors that promote H3 chromatin integrity during transcription prevent promiscuous deposition of CENP-A(Cnp1) in fission yeast.PLoS Genet2012
23103765CHD1 remodelers regulate nucleosome spacing in vitro and align nucleosomal arrays over gene coding regions in S. pombe.EMBO J2012
22615993Identification of novel human damage response proteins targeted through yeast orthology.PLoS One2012
21468231Topoisomerases, chromatin and transcription termination.Transcription2011
21901086Podbat: a novel genomic tool reveals Swr1-independent H2A.Z incorporation at gene coding sequences through epigenetic meta-analysis.PLoS Comput Biol2011
21978764Genomic phenotyping of the essential and non-essential yeast genome detects novel pathways for alkylation resistance.BMC Syst Biol2011
18805990Genomic predictors of interindividual differences in response to DNA damaging agents.Genes Dev2008
17032150Wnt but not BMP signaling is involved in the inhibitory action of sclerostin on BMP-stimulated bone formation.J Bone Miner Res2007
18039032Activation of inflammation/NF-kappaB signaling in infants born to arsenic-exposed mothers.PLoS Genet2007
18043759Transcriptional networks in S. cerevisiae linked to an accumulation of base excision repair intermediates.PLoS One2007
17327130A portrait of cisplatin-induced transcriptional changes in mouse embryonic stem cells reveals a dominant p53-like response.Mutat Res2007
17076557Analysis of gene expression using gene sets discriminates cancer patients with and without late radiation toxicity.PLoS Med2006
15656902Microarray analysis of gene expression profiles of cardiac myocytes and fibroblasts after mechanical stress, ionising or ultraviolet radiation.BMC Genomics2005
16018805Dissecting systems-wide data using mixture models: application to identify affected cellular processes.BMC Bioinformatics2005
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Collaborators

Karl Ekwall
Karolinska Institute
Co-authored papers 10
Leona D Samson
Massachusetts Institute of Technology
Co-authored papers 7
Rebecca C Fry
Co-authored papers 5
Eric Verdin
Buck Institute for Research on Aging
Co-authored papers 3
Yeyejide Adeleye
Syngenta International Research Centre
Co-authored papers 2
Emilie Battivelli
A Division of Janssen Pharmaceutica NV
Co-authored papers 2
Warner C Greene
Gladstone Institute of Virology, USA University of California san francisco
Co-authored papers 2
Andrea Gramatica
Gladstone Institute of Virology, Gladstone Institutes
Co-authored papers 2
Paul L Carmichael
Co-authored papers 2
Nevan J Krogan (CM4AI)
University of California San Francisco
Co-authored papers 2
Ulrika Axelsson
KTH - Royal Institute of Technology
Co-authored papers 2
Hyung W Lim
Gladstone Institute of Virology and Immunology
Co-authored papers 1
Joseph I Kliegman
University of California san francisco
Co-authored papers 1
Jiewei Xu
Quantitative Biosciences Institute (QBI), University of California san francisco
Co-authored papers 1
Andreas Lennartsson
Karolinska Institute
Co-authored papers 1
Ivan Rusyn
Co-authored papers 1
Hyun-Soo Kim
Wonju Severance Christian Hospital
Co-authored papers 1
Olga Loseva
Karolinska Institutet
Co-authored papers 1
Kevan M Shokat
University of California San Francisco
Co-authored papers 1
Mathuros Ruchirawat
Chulabhorn Research Institute
Co-authored papers 1
Chao Tang
Peking University
Co-authored papers 1
Jonathan Chan
From the Gladstone Institute of Virology and Immunology
Co-authored papers 1
Lingli Jiang
Jiangsu University
Co-authored papers 1
Christine Guthrie
University of California san francisco
Co-authored papers 1
Lukas J A Stalpers
Co-authored papers 1
Peter J Espenshade
Johns Hopkins University School of Medicine
Co-authored papers 1
Thomas Helleday
The University of Sheffield
Co-authored papers 1
Erik Verschueren
University of California San Francisco
Co-authored papers 1
Satish K Pillai
Vitalant Research Institute, USA University of California san francisco
Co-authored papers 1
Zongtian Tong
1University of Maryland School of Pharmacy
Co-authored papers 1
Release 1.2