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Author Details

David Marciano
Stanford Cardiovascular Institute (L.W., Stanford University School of Medicine
2003
73
26
PMIDPaper TitleJournal TitlePublished Year
36744494Dysregulated Smooth Muscle Cell BMPR2-ARRB2 Axis Causes Pulmonary Hypertension.Circ Res2023
37392518Metabolic reprogramming, oxidative stress, and pulmonary hypertension.Redox Biol2023
35696338Endogenous Retroviral Elements Generate Pathologic Neutrophils in Pulmonary Arterial Hypertension.Am J Respir Crit Care Med2022
35680894Evolutionary action of mutations reveals antimicrobial resistance genes in Escherichia coli.Nat Commun2022
35637192A cancer-associated RNA polymerase III identity drives robust transcription and expression of snaR-A noncoding RNA.Nat Commun2022
33322916PPARγ-p53-Mediated Vasculoregenerative Program to Reverse Pulmonary Hypertension.Circ Res2021
33764154ALDH1A3 Coordinates Metabolism With Gene Regulation in Pulmonary Arterial Hypertension.Circulation2021
34185707Monocyte-released HERV-K dUTPase engages TLR4 and MCAM causing endothelial mesenchymal transition.JCI Insight2021
34043002Identification of evolutionarily stable functional and immunogenic sites across the SARS-CoV-2 proteome and greater coronavirus family.Bioinformatics2021
33106800Identification of evolutionarily stable functional and immunogenic sites across the SARS-CoV-2 proteome and the greater coronavirus family.Res Sq2021
30699358PPARγ Interaction with UBR5/ATMIN Promotes DNA Repair to Maintain Endothelial Homeostasis.Cell Rep2019
31119679Personalized Metabolomics.Methods Mol Biol2019
30416039Defining a Canonical Ligand-Binding Pocket in the Orphan Nuclear Receptor Nurr1.Structure2019
29884781CRISPR-FRT targets shared sites in a knock-out collection for off-the-shelf genome editing.Nat Commun2018
28890360Synergistic Regulation of Coregulator/Nuclear Receptor Interaction by Ligand and DNA.Structure2017
28528776Structural Basis of TPR-Mediated Oligomerization and Activation of Oncogenic Fusion Kinases.Structure2017
26740599PPARγ Antagonist Gleevec Improves Insulin Sensitivity and Promotes the Browning of White Adipose Tissue.Diabetes2016
27391757Cooperativity of Negative Autoregulation Confers Increased Mutational Robustness.Phys Rev Lett2016
27422345PPARG Post-translational Modifications Regulate Bone Formation and Bone Resorption.EBioMedicine2016
26068133Pharmacological repression of PPARγ promotes osteogenesis.Nat Commun2015
26451138Identification of Bexarotene as a PPARγ Antagonist with HDX.PPAR Res2015
26585234Specific TP53 Mutants Overrepresented in Ovarian Cancer Impact CNV, TP53 Activity, Responses to Nutlin-3a, and Cell Survival.Neoplasia2015
26289479Structural mechanism for signal transduction in RXR nuclear receptor heterodimers.Nat Commun2015
26396687Design, Synthesis, and Biological Evaluation of Indole Biphenylcarboxylic Acids as PPARγ Antagonists.ACS Med Chem Lett2015
24440037The therapeutic potential of nuclear receptor modulators for treatment of metabolic disorders: PPARγ, RORs, and Rev-erbs.Cell Metab2014
25179005HDX-MS guided drug discovery: small molecules and biopharmaceuticals.Curr Opin Struct Biol2014
24910431Negative feedback in genetic circuits confers evolutionary resilience and capacitance.Cell Rep2014
24878423Prediction and redesign of protein-protein interactions.Prog Biophys Mol Biol2014
24705063An alternate binding site for PPARγ ligands.Nat Commun2014
24021383Accounting for epistatic interactions improves the functional analysis of protein structures.Bioinformatics2013
22692830HDX workbench: software for the analysis of H/D exchange MS data.J Am Soc Mass Spectrom2012
21912525Separation of recombination and SOS response in Escherichia coli RecA suggests LexA interaction sites.PLoS Genet2011
21892191Antidiabetic actions of a non-agonist PPARγ ligand blocking Cdk5-mediated phosphorylation.Nature2011
19913036Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain.J Mol Biol2010
20836087The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu.Protein Sci2010
20944232Structure of the γ-D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala-γ-D-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944231Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944230Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved α+β core domain and an auxiliary C-terminal treble-clef zinc finger.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944229Structure of a tryptophanyl-tRNA synthetase containing an iron-sulfur cluster.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944228The structure of Haemophilus influenzae prephenate dehydrogenase suggests unique features of bifunctional TyrA enzymes.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944225Structure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944224Structure of Bacteroides thetaiotaomicron BT2081 at 2.05⿿ÿ resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944223A conserved fold for fimbrial components revealed by the crystal structure of a putative fimbrial assembly protein (BT1062) from Bacteroides thetaiotaomicron at 2.2⿿ÿ resolution.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944222Structure of BT_3984, a member of the SusD/RagB family of nutrient-binding molecules.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944221The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944219The structure of KPN03535 (gi|152972051), a novel putative lipoprotein from Klebsiella pneumoniae, reveals an OB-fold.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944218Open and closed conformations of two SpoIIAA-like proteins (YP_749275.1 and YP_001095227.1) provide insights into membrane association and ligand binding.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944217Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944214Structures of the first representatives of Pfam family PF06938 (DUF1285) reveal a new fold with repeated structural motifs and possible involvement in signal transduction.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
20944213The structure of the first representative of Pfam family PF06475 reveals a new fold with possible involvement in glycolipid metabolism.Acta Crystallogr Sect F Struct Biol Cryst Commun2010
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Collaborators

Argonne National Laboratory
Co-authored papers 36
Rice University
Co-authored papers 35
University of California Riverside
Co-authored papers 35
University of California
Co-authored papers 35
Stanford University
Co-authored papers 35
Joint Center for Structural Genomics, University of California - San Diego
Co-authored papers 35
Joint Center for Structural Genomics
Co-authored papers 35
Merck & Co., Inc.
Co-authored papers 35
Co-authored papers 35
University of Lucknow
Co-authored papers 35
Brown University
Co-authored papers 35
Co-authored papers 35
Co-authored papers 35
Cardiovascular Institute, Stanford University School of Medicine
Co-authored papers 35
Bridge Institute, University of Southern California
Co-authored papers 35
Joint Center for Structural Genomics
Co-authored papers 35
The Scripps Research Institute, USA The Skaggs Institute for Chemical Biology
Co-authored papers 35
Merck & Co., Inc.
Co-authored papers 35
Regeneron Pharmaceuticals, Inc.
Co-authored papers 35
Genomics Institute of the Novartis Research Foundation
Co-authored papers 35
Accelero Biostructures Inc., USA XPose Therapeutics Inc.
Co-authored papers 35
University of California San Francisco
Co-authored papers 35
Joint Center for Structural Genomics, Sanford-Burnham Medical Research Institute
Co-authored papers 35
Joint Center for Structural Genomics
Co-authored papers 35
Celgene/Bristol-Myers Squibb Corporation
Co-authored papers 35
University of California Riverside School of Medicine
Co-authored papers 35
Institute of Science, Banaras Hindu University
Co-authored papers 34
Co-authored papers 34
Incyte Corporation
Co-authored papers 34
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