Skip to Main Content

Author Details

James E Ferrell
1979
137
63
PMIDPaper TitleJournal TitlePublished Year
37162886Protein homeostasis from diffusion-dependent control of protein synthesis and degradation.2023
36993633Ultrafast and long-range coordination of wound responses is essential for whole-body regeneration.2023
37480850Ultrafast distant wound response is essential for whole-body regeneration.2023
36151204Cytoplasmic organization promotes protein diffusion in Xenopus extracts.Nature Communications2022
34400648C. elegans colony formation as a condensation phenomenon.Nature Communications2021
34152312Xenopus laevis Egg Extract Preparation and Live Imaging Methods for Visualizing Dynamic Cytoplasmic Organization.Journal of Visualized Experiments2021
34085213Real-Time Monitoring of APC /C-Mediated Substrate Degradation Using Xenopus laevis Egg Extracts.Methods in Molecular Biology2021
33357450Bistable, Biphasic Regulation of PP2A-B55 Accounts for the Dynamics of Mitotic Substrate Phosphorylation.Current Biology2021
34515295Stepwise oxidations play key roles in the structural and functional regulations of DJ-1.Biochemical Journal2021
32668239The Apparent Requirement for Protein Synthesis during G2 Phase Is due to Checkpoint Activation.Cell Rep2020
33284106The nucleus serves as the pacemaker for the cell cycle.eLife2020
30930056Disruption of Telomerase RNA Maturation Kinetics Precipitates Disease.Molecular Cell2019
31672897Spontaneous emergence of cell-like organization in egg extracts.Science2019
31014479Efficient Front-Rear Coupling in Neutrophil Chemotaxis by Dynamic Myosin II Localization.Dev Cell2019
31048459A compact synthetic pathway rewires cancer signaling to therapeutic effector release.Science2019
29475997Robustly Cycling Cell-Free Extracts in Teflon Chambers.Cold Spring Harbor Protocols2018
30093599Apoptosis propagates through the cytoplasm as trigger waves.Science2018
28157499The Temporal Ordering of Cell-Cycle Phosphorylation.Molecular Cell2017
28765527Calcium Ion Induced Structural Changes Promote Dimerization of Secretagogin, Which Is Required for Its Insulin Secretory Function.Scientific Reports2017
28978482Desynchronizing Embryonic Cell Division Waves Reveals the Robustness of Xenopus laevis Development.Cell Reports2017
27533180The Prozone Effect Accounts for the Paradoxical Function of the Cdk-Binding Protein Suc1/Cks.Cell Rep2016
27135159Perfect and Near-Perfect Adaptation in Cell Signaling.Cell Systems2016
27174675Thresholds and ultrasensitivity from negative cooperativity.Science2016
26854218The Prozone Effect Accounts for the Paradoxical Function of the Cdk-Binding Protein Suc1/Cks.Cell Rep2016
26212326How Does the Xenopus laevis Embryonic Cell Cycle Avoid Spatial Chaos?Cell Rep2015
25240485Ultrasensitivity part I: Michaelian responses and zero-order ultrasensitivity.Trends in Biochemical Sciences2014
25456048Ultrasensitivity part III: cascades, bistable switches, and oscillators.Trends in Biochemical Sciences2014
25368427Spatial trigger waves: positive feedback gets you a long way.Molecular Biology of the Cell2014
25440716Ultrasensitivity part II: multisite phosphorylation, stoichiometric inhibitors, and positive feedback.Trends in Biochemical Sciences2014
24523664Changes in oscillatory dynamics in the cell cycle of early Xenopus laevis embryos.PLoS Biology2014
23624406The Cdk1-APC/C cell cycle oscillator circuit functions as a time-delayed, ultrasensitive switch.Nature Cell Biology2013
23863935Mitotic trigger waves and the spatial coordination of the Xenopus cell cycle.Nature2013
23927869Feedback loops and reciprocal regulation: recurring motifs in the systems biology of the cell cycle.Current Opinion in Cell Biology2013
23361981Bistability in one equation or fewer.Methods in Molecular Biology2012
22726437Spatial positive feedback at the onset of mitosis.Cell2012
22677291Bistability, bifurcations, and Waddington's epigenetic landscape.Current Biology2012
22324380Dora B. Goldstein 1922-2011.Addiction2012
21855788Simple rules for complex processes: new lessons from the budding yeast cell cycle.Molecular Cell2011
21292159Ultrasensitivity in the Regulation of Cdc25C by Cdk1.Mol Cell2011
21414480Modeling the cell cycle: why do certain circuits oscillate?Cell2011
22078888A mechanism for the evolution of phosphorylation sites.Cell2011
20660152The roles of cyclin A2, B1, and B2 in early and late mitotic events.Molecular Biology of the Cell2010
20028868Systems biologists seek fuller integration of systems biology approaches in new cancer research programs.Cancer Res2010
19878681Simple, realistic models of complex biological processes: positive feedback and bistability in a cell fate switch and a cell cycle oscillator.FEBS Lett2009
19222866Q&A: systems biology.Journal of Biology2009
19589184Q&A: Cooperativity.Journal of Biology2009
19390045Tuning the activation threshold of a kinase network by nested feedback loops.Science2009
19383362Report on EU-USA workshop: how systems biology can advance cancer research (27 October 2008).Mol Oncol2009
19901979Concordant regulation of translation and mRNA abundance for hundreds of targets of a human microRNA.PLoS Biology2009
20005833Signaling motifs and Weber's law.Molecular Cell2009
  • 1 - 50 of 137

Recommended Authors

Collaborators

Co-authored papers 9
Asan Medical Center, University of Ulsan College of Medicine
Co-authored papers 8
The Francis Crick Institute
Co-authored papers 3
Co-authored papers 2
European Institute for Systems Biology and Medicine
Co-authored papers 2
Co-authored papers 2
Co-authored papers 2
Bakar Computational Health Sciences Institute, University of California san francisco
Co-authored papers 1
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 1
Novo Nordisk Foundation Center for Protein Research, University of Copenhagen
Co-authored papers 1
Co-authored papers 1
Stanford University School of Medicine
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
University of California davis
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
KTH Royal Institute of Technology
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
University of California san francisco
Co-authored papers 1
Institute for Biophysical Chemistry, Goethe-University
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
Co-authored papers 1
Lawrence Berkeley National Laboratory
Co-authored papers 1
Co-authored papers 1