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Author Details

Shashank Sathe
University of California, USA Institute for Genomic Medicine
2013
27
15
PMIDPaper TitleJournal TitlePublished Year
35051350Pseudouridine synthases modify human pre-mRNA co-transcriptionally and affect pre-mRNA processing.Mol Cell2022
35411350Wastewater sequencing uncovers early, cryptic SARS-CoV-2 variant transmission.medRxiv2022
35798029Wastewater sequencing reveals early cryptic SARS-CoV-2 variant transmission.Nature2022
35703437Implementation of Practical Surface SARS-CoV-2 Surveillance in School Settings.mSystems2022
35703436Sentinel Cards Provide Practical SARS-CoV-2 Monitoring in School Settings.mSystems2022
35575492SARS-CoV-2 Distribution in Residential Housing Suggests Contact Deposition and Correlates with <i>Rothia</i> sp.mSystems2022
35781533The splicing factor RBM17 drives leukemic stem cell maintenance by evading nonsense-mediated decay of pro-leukemic factors.Nat Commun2022
33402748Author Correction: A large-scale binding and functional map of human RNA-binding proteins.Nature2021
33861950Emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States.Cell2021
34909793SARS-CoV-2 Distribution in Residential Housing Suggests Contact Deposition and Correlates with <i>Rothia</i> sp.medRxiv2021
34496257Persistent mRNA localization defects and cell death in ALS neurons caused by transient cellular stress.Cell Rep2021
34380031Non-microRNA binding competitively inhibits LIN28 regulation.Cell Rep2021
34732726Gain-of-function cardiomyopathic mutations in RBM20 rewire splicing regulation and re-distribute ribonucleoprotein granules within processing bodies.Nat Commun2021
34726486Analysis of SARS-CoV-2 RNA Persistence across Indoor Surface Materials Reveals Best Practices for Environmental Monitoring Programs.mSystems2021
34508652Emergence of an early SARS-CoV-2 epidemic in the United States.Cell2021
34312621Comparison of heat-inactivated and infectious SARS-CoV-2 across indoor surface materials shows comparable RT-qPCR viral signal intensity and persistence.bioRxiv2021
31624092Direct RNA sequencing enables m<sup>6</sup>A detection in endogenous transcript isoforms at base-specific resolution.RNA2020
33287884Transcriptome-wide profiles of circular RNA and RNA-binding protein interactions reveal effects on circular RNA biogenesis and cancer pathway expression.Genome Med2020
32807991Large-scale tethered function assays identify factors that regulate mRNA stability and translation.Nat Struct Mol Biol2020
32943573Context-dependent functional compensation between Ythdf m<sup>6</sup>A reader proteins.Genes Dev2020
32848060Transcriptome-wide analysis of PGC-1α-binding RNAs identifies genes linked to glucagon metabolic action.Proc Natl Acad Sci U S A2020
30527666A Transcriptome-wide Translational Program Defined by LIN28B Expression Level.Mol Cell2019
28092684Biallelic mutations in the 3' exonuclease TOE1 cause pontocerebellar hypoplasia and uncover a role in snRNA processing.Nat Genet2017
27020753A Small RNA-Catalytic Argonaute Pathway Tunes Germline Transcript Levels to Ensure Embryonic Divisions.Cell2016
27775709RNA-binding protein CPEB1 remodels host and viral RNA landscapes.Nat Struct Mol Biol2016
27068461Enhanced CLIP Uncovers IMP Protein-RNA Targets in Human Pluripotent Stem Cells Important for Cell Adhesion and Survival.Cell Rep2016
23741360Metagenomic insights into anaerobic metabolism along an Arctic peat soil profile.PLoS One2013
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Collaborators

Gene W Yeo
University of California
Co-authored papers 26
Stefan Aigner
University of California San Diego
Co-authored papers 14
Pedro Belda-Ferre
University of California San Diego
Co-authored papers 9
Rebecca Tsai
University of California San Diego
Co-authored papers 8
Peter De Hoff
University of California San Diego
Co-authored papers 8
Rebecca Fielding-Miller
Herbert Wertheim School of Public Health, University of California
Co-authored papers 8
Emily Eisner
University of Manchester
Co-authored papers 6
Clarisse Marotz
University of California San Diego
Co-authored papers 5
Karthik Gangavarapu
the Scripps Research Institute
Co-authored papers 4
Refugio Robles-Sikisaka
The Scripps Research Institute
Co-authored papers 4
Aaron F Carlin
Co-authored papers 4
Mark Zeller
Rega Institute, University of Leuven
Co-authored papers 4
Alexandre Bolze
The Rockefeller University
Co-authored papers 3
Eric L Van Nostrand
University of California
Co-authored papers 3
Duncan MacCannell
Centers for Disease Control and Prevention
Co-authored papers 3
Joseph O Falkinham
Virginia Tech
Co-authored papers 3
Laura Nicholson
Scripps Clinic/Scripps Green Hospital
Co-authored papers 3
Nathaniel L Matteson
The Scripps Research Institute
Co-authored papers 3
Aaron Harding
Co-authored papers 3
Elizabeth T Cirulli
Duke University
Co-authored papers 3
Emily C Wheeler
University of California
Co-authored papers 3
Magnus Isaksson
Uppsala University
Co-authored papers 3
Omid Bakhtar
University of Arizona Medical Center
Co-authored papers 3
Smruthi Karthikeyan
California Institute of Technology
Co-authored papers 2
Kathleen M Fisch
Center for Computational Biology and Bioinformatics, University of California
Co-authored papers 2
Angela L Scioscia
University of California San Diego
Co-authored papers 2
Edyth Parker
The Scripps Research Institute
Co-authored papers 2
David Dimmock
Rady Children's Institute for Genomic Medicine
Co-authored papers 2
Alison Sanders
University of California San Diego
Co-authored papers 2
Steven L Gonias
University of California san francisco
Co-authored papers 2
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