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Author Details

Jennifer McDaniel
National Institute of Standards and Technology
2011
16
14
PMIDPaper TitleJournal TitlePublished Year
37612512The complete sequence of a human Y chromosome.Nature2023
35132260Curated variation benchmarks for challenging medically relevant autosomal genes.Nat Biotechnol2022
35720974PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions.Cell Genom2022
35357935A complete reference genome improves analysis of human genetic variation.Science2022
30936564An open resource for accurately benchmarking small variant and reference calls.Nat Biotechnol2019
28714986Genome-wide reconstruction of complex structural variants using read clouds.Nat Methods2017
27335807An international comparability study on quantification of mRNA gene expression ratios: CCQM-P103.1.Biomol Detect Quantif2016
27271295Extensive sequencing of seven human genomes to characterize benchmark reference materials.Sci Data2016
27342544Evaluation of the External RNA Controls Consortium (ERCC) reference material using a modified Latin square design.BMC Biotechnol2016
27512518External RNA Controls Consortium Beta Version Update.J Genomics2016
26383878Using mixtures of biological samples as process controls for RNA-sequencing experiments.BMC Genomics2015
24840613Ontology analysis of global gene expression differences of human bone marrow stromal cells cultured on 3D scaffolds or 2D films.Biomaterials2014
25122639Intratumoral injection of Clostridium novyi-NT spores induces antitumor responses.Sci Transl Med2014
22531030Mediation of Drosophila autosomal dosage effects and compensation by network interactions.Genome Biol2012
22859977Synthetic spike-in standards improve run-specific systematic error analysis for DNA and RNA sequencing.PLoS One2012
21890197The determination of stem cell fate by 3D scaffold structures through the control of cell shape.Biomaterials2011
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Collaborators

Marc Salit
Stanford University
Co-authored papers 11
Justin M Zook
National Institute of Standards and Technology
Co-authored papers 8
Nathan D Olson
National Institute of Standards and Technology
Co-authored papers 5
Chunlin Xiao
Chongqing Aier Eye Hospital
Co-authored papers 4
Fritz J Sedlazeck
Baylor College of Medicine
Co-authored papers 4
Nancy F Hansen
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 2
Aaron M Wenger
Stanford School of Medicine
Co-authored papers 2
Christopher E Mason
Feil Family Brain and Mind Research Institute.
Co-authored papers 2
Sergey Koren
National Human Genome Research Institute, National Institutes of Health
Co-authored papers 2
Miten Jain
Northeastern University
Co-authored papers 2
Joyce Lee
Co-authored papers 2
Rebecca Truty
Invitae Corporation
Co-authored papers 2
Sayed Mohammad Ebrahim Sahraeian
Roche Sequencing Solutions Inc.
Co-authored papers 2
Arend Sidow
Co-authored papers 2
Michael C Schatz
Johns Hopkins University
Co-authored papers 2
Stephen T Sherry
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 2
Noah Spies
Stanford University
Co-authored papers 2
Adam M Phillippy
National Human Genome Research Institute, National Institutes of Health
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Benedict Paten
UC Santa Cruz Genomics Institute, University of California
Co-authored papers 2
Arkarachai Fungtammasan
DNAnexus Inc.
Co-authored papers 2
Mathieu Bourgey
McGill University
Co-authored papers 1
Shurjo K Sen
Louisiana State University
Co-authored papers 1
Daniel V Samarov
National Institute of Standards and Technology
Co-authored papers 1
Keyan Zhao
Co-authored papers 1
Srinka Ghosh
Co-authored papers 1
Guillaume Bourque
Institute for the Advanced Study of Human Biology (ASHBi), Kyoto University
Co-authored papers 1
Robert Sebra
Icahn School of Medicine at Mount Sinai
Co-authored papers 1
Nickolas Papadopoulos
Co-authored papers 1
Jason Bobe
Co-authored papers 1
Robert Hubley
Co-authored papers 1
Release 1.2