Author details

Full Name

Samuel Levy

Affiliation

Bluestar Genomics Inc.

ORCID

Career Start Year

1991

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37863405	Reply.	Clin Gastroenterol Hepatol	2024
36967102	Epigenomic Blood-Based Early Detection of Pancreatic Cancer Employing Cell-Free DNA.	Clin Gastroenterol Hepatol	2023
36251389	The 5-Hydroxymethylcytosine Landscape of Prostate Cancer.	Cancer Res	2022
35532363	The Cell Type-Specific 5hmC Landscape and Dynamics of Healthy Human Hematopoiesis and TET2-Mutant Preleukemia.	Blood Cancer Discov	2022
33268789	A human tissue map of 5-hydroxymethylcytosines exhibits tissue specificity through gene and enhancer modulation.	Nat Commun	2020
33077732	Detection of early stage pancreatic cancer using 5-hydroxymethylcytosine signatures in circulating cell free DNA.	Nat Commun	2020
23999524	Evidence for the role of EPHX2 gene variants in anorexia nervosa.	Mol Psychiatry	2014
25306186	Genetic variants in Cell Adhesion Molecule 1 (CADM1): a validation study of a novel endothelial cell venous thrombosis risk factor.	Thromb Res	2014
24760347	Somatic mutations found in the healthy blood compartment of a 115-yr-old woman demonstrate oligoclonal hematopoiesis.	Genome Res	2014
24727804	Fusion transcript discovery in formalin-fixed paraffin-embedded human breast cancer tissues reveals a link to tumor progression.	PLoS One	2014
24700542	Gain-of-function ADCY5 mutations in familial dyskinesia with facial myokymia.	Ann Neurol	2014
23384677	Rapid deep sequencing of patient-derived HIV with ion semiconductor technology.	J Virol Methods	2013
21493686	Distinct patterns of somatic alterations in a lymphoblastoid and a tumor genome derived from the same individual.	Nucleic Acids Res	2011
21383244	A mechanism for TCR sharing between T cell subsets and individuals revealed by pyrosequencing.	J Immunol	2011
20529926	VARiD: a variation detection framework for color-space and letter-space platforms.	Bioinformatics	2010
21108794	Systematic detection of putative tumor suppressor genes through the combined use of exome and transcriptome sequencing.	Genome Biol	2010
20482838	Towards a comprehensive structural variation map of an individual human genome.	Genome Biol	2010
19036787	The HuRef Browser: a web resource for individual human genomics.	Nucleic Acids Res	2009
19956396	Expression profiling of the ovarian surface kinome reveals candidate genes for early neoplastic changes.	Transl Oncol	2009
19812653	An agenda for personalized medicine.	Nature	2009
19327155	Evaluation of next generation sequencing platforms for population targeted sequencing studies.	Genome Biol	2009
19439515	Mobile elements create structural variation: analysis of a complete human genome.	Genome Res	2009
19181860	Transcriptome-guided characterization of genomic rearrangements in a breast cancer cell line.	Proc Natl Acad Sci U S A	2009
19289091	NA-Seq: a discovery tool for the analysis of chromatin structure and dynamics during differentiation.	Dev Cell	2009
18405373	Novel computational methods for increasing PCR primer design effectiveness in directed sequencing.	BMC Bioinformatics	2008
18987731	Human genetics: Individual genomes diversify.	Nature	2008
18704161	Genetic variation in an individual human exome.	PLoS Genet	2008
18703790	Superoxide dismutase 3 polymorphism associated with reduced lung function in two large populations.	Am J Respir Crit Care Med	2008
18598911	Emerging DNA sequencing technologies for human genomic medicine.	Drug Discov Today	2008
18714319	Individual genomes instead of race for personalized medicine.	Clin Pharmacol Ther	2008
18321888	Consensus generation and variant detection by Celera Assembler.	Bioinformatics	2008
17803354	The diploid genome sequence of an individual human.	PLoS Biol	2007
17606983	Promoting transcriptome diversity.	Genome Res	2007
16580849	Identification and cross-species comparison of canine osteoarthritic gene regulatory cis-elements.	Osteoarthritis Cartilage	2006
16186508	Sequence survey of receptor tyrosine kinases reveals mutations in glioblastomas.	Proc Natl Acad Sci U S A	2005
15001713	Environmental genome shotgun sequencing of the Sargasso Sea.	Science	2004
12610531	Massive parallelism, randomness and genomic advances.	Nat Genet	2003
14512627	The dog genome: survey sequencing and comparative analysis.	Science	2003
14629111	Transcriptional regulation of protein complexes and biological pathways.	Mamm Genome	2003
12364607	Predicting transcription factor synergism.	Nucleic Acids Res	2002
12370781	Identification of transcription factor binding sites in the human genome sequence.	Mamm Genome	2002
11181995	The sequence of the human genome.	Science	2001
11673231	Enrichment of regulatory signals in conserved non-coding genomic sequence.	Bioinformatics	2001
11472997	Promoter prediction in the human genome.	Bioinformatics	2001
9524251	Gene organization and chromosome location of the neural-specific RNA binding protein Elavl4.	Gene	1998
9520504	Xlandscape: the graphical display of word frequencies in sequences.	Bioinformatics	1998
9276930	Applications of S-layers.	FEMS Microbiol Rev	1997
9107029	Xyloglucan sidechains modulate binding to cellulose during in vitro binding assays as predicted by conformational dynamics simulations.	Plant J	1997
8589257	Dynamic simulations of the molecular conformations of wild type and mutant xanthan polymers suggest that conformational differences may contribute to observed differences in viscosity.	Biopolymers	1996
8051229	Evaluation of linked PCR-transcription amplification procedure for bean yellow mosaic virus detection in gladioli.	J Virol Methods	1994

1 - 50 of 52

Manolis Kellis

Massachusetts Institute of Technology

Career Start Year 2003

Number of shared co-authors 24

Christie L Kovar

Baylor College of Medicine

Career Start Year 2002

Number of shared co-authors 19

Martin S Taylor

Institute of Genetics and Cancer, University of Edinburgh

Career Start Year 2000

Number of shared co-authors 21

Alexander V Favorov

Johns Hopkins School of Medicine

Career Start Year 1999

Number of shared co-authors 1

Sarah J Wheelan

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1998

Number of shared co-authors 4

Colin A Semple

Institute of Genetics and Cancer, University of Edinburgh

Career Start Year 1997

Number of shared co-authors 4

Laura Elnitski

National Human Genome Research Institute

Career Start Year 1997

Number of shared co-authors 20

Panayiotis V Benos

University of Florida

Career Start Year 1996

Number of shared co-authors 99

Jared C Roach

Institute for Systems Biology

Career Start Year 1995

Number of shared co-authors 13

Steven J M Jones

University of British Columbia

Career Start Year 1995

Number of shared co-authors 59

Lucinda Fulton

McDonnell Genome Institute, Washington University School of Medicine

Career Start Year 1994

Number of shared co-authors 32

Zhiping Weng

University of Massachusetts Medical School

Career Start Year 1992

Number of shared co-authors 8

Ewan Birney

European Bioinformatics Institute

Career Start Year 1992

Number of shared co-authors 71

Aleksandar Milosavljevic

Baylor College of Medicine

Career Start Year 1991

Number of shared co-authors 31

Mark Gerstein

Yale University

Career Start Year 1991

Number of shared co-authors 17

Winston Hide

Harvard Medical School

Career Start Year 1991

Number of shared co-authors 14

Wing Hung Wong

Stanford University

Career Start Year 1991

Number of shared co-authors 2

Thomas J Hudson

Ontario Institute for Cancer Research

Career Start Year 1991

Number of shared co-authors 16

Roderic Guig??

Barcelona Institute of Science and Technology

Career Start Year 1990

Number of shared co-authors 37

Gustavo Glusman

Institute for Systems Biology

Career Start Year 1988

Number of shared co-authors 11

Richard A Gibbs

Baylor College of Medicine

Career Start Year 1987

Number of shared co-authors 128

Ian Dunham

European Bioinformatics Institute (EMBL-EBI)

Career Start Year 1987

Number of shared co-authors 12

David Haussler

Genomics Institute, University of California Santa Cruz

Career Start Year 1986

Number of shared co-authors 37

Eric S Lander

Vanderbilt-Ingram Cancer Center, Vanderbilt University

Career Start Year 1986

Number of shared co-authors 37

John D McPherson

Ontario Institute for Cancer Research

Career Start Year 1986

Number of shared co-authors 26

James C Mullikin

National Human Genome Research Institute, National Institutes of Health

Career Start Year 1985

Number of shared co-authors 17

Stephan Beck

UCL Cancer Institute, University College London

Career Start Year 1983

Number of shared co-authors 6

Richard K Wilson

The Ohio State University

Career Start Year 1983

Number of shared co-authors 35

Michael Snyder

Stanford University

Career Start Year 1981

Number of shared co-authors 27

Richard M Myers

HudsonAlpha Institute for Biotechnology

Career Start Year 1980

Number of shared co-authors 20

row(s) 1 - 30 of 30

Robert L Strausberg

Ludwig Institute for Cancer Research

Co-authored papers 14

J C Venter

The J. Craig Venter Institute

Co-authored papers 12

Ewen F Kirkness

J. Craig Venter Institute

Co-authored papers 7

Dana Busam

J. Craig Venter Institute

Co-authored papers 6

Aaron L Halpern

Illumina Inc.

Co-authored papers 6

Karen Beeson

J. Craig Venter Institute

Co-authored papers 6

Karin A Remington

The J. Craig Venter Institute.

Co-authored papers 5

Andrew J G Simpson

University of Hull

Co-authored papers 5

Yu-Hui Rogers

Johns Hopkins Bayview Research Campus

Co-authored papers 5

Tierney Phillips

Bluestar Genomics Inc.

Co-authored papers 5

Otavia L Caballero

Ludwig Institute for Cancer Research Ltd.

Co-authored papers 4

Anna Bergamaschi

Bluestar Genomics Inc.

Co-authored papers 4

Tina C McIntosh

Co-authored papers 4

Erin McCarthy

Bluestar Genomics Inc.

Co-authored papers 4

Nicholas J Schork

University of California San Diego

Co-authored papers 3

Steve Ferriera

Broad Institute of MIT and Harvard

Co-authored papers 3

Qi Zhao

University of Science and Technology Liaoning

Co-authored papers 3

Douglas B Rusch

Center for Genomics and Bioinformatics, Indiana University

Co-authored papers 3

Saul Kravitz

Co-authored papers 3

Sandro J de Souza

Universidade Federal do Rio Grande do Norte

Co-authored papers 3

Vineet Bafna

University of California San Diego

Co-authored papers 3

Pedro A F Galante

Hospital Sirio Libanes

Co-authored papers 3

Eric J Topol

Universidade Federal de Sao Paulo

Co-authored papers 3

Anamaria A Camargo

Hospital Sirio-Libanes

Co-authored papers 2

Raphael B Parmigiani

Sirio-Libanes Hospital

Co-authored papers 2

Paul Lloyd

Bluestar Genomics Inc.

Co-authored papers 2

Cynthia Andrews-Pfannkoch

Mayo Clinic

Co-authored papers 2

Guangfa Zhang

Sichuan Agricultural University

Co-authored papers 2

Andrew R Carson

University of Pittsburgh

Co-authored papers 2

Phillip Pham

Duke University

Co-authored papers 2

1 - 30

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