Author details

Full Name

Andy Brass

Affiliation

ORCID

Career Start Year

1988

Papers

120

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
35812026	Understanding the development and function of the gut microbiota in health and inflammation.	Frontline Gastroenterology	2022
33407124	The role of Î² integrin in dendritic cell migration during infection.	BMC Immunology	2021
33972615	Cage and maternal effects on the bacterial communities of the murine gut.	Scientific Reports	2021
34326160	Artificial intelligence projects in healthcare: 10 practical tips for success in a clinical environment.	BMJ Health and Care Informatics	2021
32381682	Glucocorticoids rapidly inhibit cell migration through a novel, non-transcriptional HDAC6 pathway.	Journal of Cell Science	2020
32203551	In silico design of a T-cell epitope vaccine candidate for parasitic helminth infection.	PLoS Pathogens	2020
31840738	Differential Expression of Soluble Receptor for Advanced Glycation End-products in Mice Susceptible or Resistant to Chronic Colitis.	Inflammatory Bowel Diseases	2020
32231685	Hardy-Weinberg Equilibrium in the Large Scale Genomic Sequencing Era.	Frontiers in Genetics	2020
31873297	GeVIR is a continuous gene-level metric that uses variant distribution patterns to prioritize disease candidate genes.	Nature Genetics	2020
31246944	Problem-based learning in clinical bioinformatics education: Does it help to create communities of practice?	PLoS Computational Biology	2019
31433857	Gut eosinophils and their impact on the mucus-resident microbiota.	Immunology	2019
29240930	Britain Breathing: using the experience sampling method to collect the seasonal allergy symptoms of a country.	Journal of the American Medical Informatics Association : JAMIA	2018
29491349	The circadian regulator BMAL1 programmes responses to parasitic worm infection via a dendritic cell clock.	Scientific Reports	2018
29223464	Data journeys: Identifying social and technical barriers to data movement in large, complex organisations.	Journal of Biomedical Informatics	2018
28617232	TIGERi: modeling and visualizing the responses to perturbation of a transcription factor network.	BMC Bioinformatics	2017
28498157	Compositional Changes in the Gut Mucus Microbiota Precede the Onset of Colitis-Induced Inflammation.	Inflammatory Bowel Diseases	2017
26939790	Bias in the reporting of sex and age in biomedical research on mouse models.	Elife	2016
27331905	A Survey of Bioinformatics Database and Software Usage through Mining the Literature.	PLoS One	2016
27226058	Glucocorticoid receptor isoforms direct distinct mitochondrial programs to regulate ATP production.	Sci Rep	2016
25989337	Quality of methods reporting in animal models of colitis.	Inflamm Bowel Dis	2015
25076044	The quality of methods reporting in parasitology experiments.	PLoS One	2014
25937879	Evaluating the Emotion Ontology through use in the self-reporting of emotional responses at an academic conference.	J Biomed Semantics	2014
24410884	The languages of health in general practice electronic patient records: a Zipf's law analysis.	Journal of Biomedical Semantics	2014
24635179	A statistical analysis of murine incisional and excisional acute wound models.	Wound Repair and Regeneration	2014
25161253	Extracting patterns of database and software usage from the bioinformatics literature.	Bioinformatics	2014
23442222	Genetic analysis of the Trichuris muris-induced model of colitis reveals QTL overlap and a novel gene cluster for establishing colonic inflammation.	BMC Genomics	2013
23768135	bioNerDS: exploring bioinformatics' database and software use through literature mining.	BMC Bioinformatics	2013
23920514	Taming EHR data: using semantic similarity to reduce dimensionality.		2013
23199416	Vulnerability versus resilience to prenatal stress in male and female rats; implications from gene expression profiles in the hippocampus and frontal cortex.	European Neuropsychopharmacology	2013
23144973	Novel SNP Discovery in African Buffalo, Syncerus caffer, using high-throughput Sequencing.	PLoS ONE	2012
22469662	Progressive lung cancer determined by expression profiling and transcriptional regulation.	Int J Oncol	2012
22676436	The language of gene ontology: a Zipf's law analysis.	BMC Bioinformatics	2012
21593421	Genetic and expression analysis of cattle identifies candidate genes in pathways responding to Trypanosoma congolense infection.	Proc Natl Acad Sci U S A	2011
21267416	Ultradian cortisol pulsatility encodes a distinct, biologically important signal.	PLoS ONE	2011
21075611	Differential gene expression in mutant mice overexpressing or deficient in the serotonin transporter: a focus on urocortin 1.	European Neuropsychopharmacology	2011
19854624	Differential gene expression in a rat model of depression based on persistent differences in exploratory activity.	European Neuropsychopharmacology	2010
21085469	A comprehensive genetic analysis of candidate genes regulating response to Trypanosoma congolense infection in mice.	PLoS Negl Trop Dis	2010
20844758	Claudin 13, a member of the claudin family regulated in mouse stress induced erythropoiesis.	PLoS ONE	2010
20529291	Genotype and expression analysis of two inbred mouse strains and two derived congenic strains suggest that most gene expression is trans regulated and sensitive to genetic background.	BMC Genomics	2010
19939286	ExprAlign--the identification of ESTs in non-model species by alignment of cDNA microarray expression profiles.	BMC Genomics	2009
19596769	Clinical chemistry of congenic mice with quantitative trait loci for predicted responses to Trypanosoma congolense infection.	Infect Immun	2009
19365556	Mechanisms controlling anaemia in Trypanosoma congolense infected mice.	PLoS One	2009
19567785	Pleiotropic effects of negative energy balance in the postpartum dairy cow on splenic gene expression: repercussions for innate and adaptive immunity.	Physiological Genomics	2009
19763936	A systematic strategy for the discovery of candidate genes responsible for phenotypic variation.	Methods Mol Biol	2009
18598341	Strong position-dependent effects of sequence mismatches on signal ratios measured using long oligonucleotide microarrays.	BMC Genomics	2008
18817316	A systematic, data-driven approach to the combined analysis of microarray and QTL data.	Developments in Biologicals	2008
18817289	Genomics approaches to study the biology underlying resistance to trypanosomiasis--some unexpected lessons.	Dev Biol (Basel)	2008
17709344	A systematic strategy for large-scale analysis of genotype phenotype correlations: identification of candidate genes involved in African trypanosomiasis.	Nucleic Acids Res	2007
16901223	Annotation of environmental OMICS data: application to the transcriptomics domain.	OMICS	2006
16873517	Protein classification using ontology classification.	Bioinformatics	2006