Author details

Full Name

Adrianne Gladden-Young

Affiliation

ORCID

Career Start Year

2007

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36994187	Diverse pathways toward a cure.		2023
34907347	Synthetic DNA spike-ins (SDSIs) enable sample tracking and detection of inter-sample contamination in SARS-CoV-2 sequencing workflows.	Nat Microbiol	2022
36198312	Multimodal surveillance of SARS-CoV-2 at a university enables development of a robust outbreak response framework.	Med	2022
34497403	Author Correction: Direct characterization of cis-regulatory elements and functional dissection of complex genetic associations using HCR-FlowFISH.	Nat Genet	2021
33872044	SARS-CoV-2 Reinfection in a Liver Transplant Recipient.	Ann Intern Med	2021
34326544	Direct characterization of cis-regulatory elements and functional dissection of complex genetic associations using HCR-FlowFISH.	Nat Genet	2021
33758855	DNA spike-ins enable confident interpretation of SARS-CoV-2 genomic data from amplicon-based sequencing.	bioRxiv	2021
33303686	Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events.	Science	2021
34452470	The Origins and Future of Sentinel: An Early-Warning System for Pandemic Preemption and Response.	Viruses	2021
32869040	Phylogenetic analysis of SARS-CoV-2 in the Boston area highlights the role of recurrent importation and superspreading events.	medRxiv	2020
30718881	Capturing sequence diversity in metagenomes with comprehensive and scalable probe design.	Nat Biotechnol	2019
30332564	Genomic Analysis of Lassa Virus during an Increase in Cases in Nigeria in 2018.	N Engl J Med	2018
28405027	Virus genomes reveal factors that spread and sustained the Ebola epidemic.	Nature	2017
28538734	Zika virus evolution and spread in the Americas.	Nature	2017
28538723	Genomic epidemiology reveals multiple introductions of Zika virus into the United States.	Nature	2017
27826357	Systematic comparison of monoclonal versus polyclonal antibodies for mapping histone modifications by ChIP-seq.	Epigenetics Chromatin	2016
27377746	Ebola Virus Epidemiology and Evolution in Nigeria.	J Infect Dis	2016
27180906	SIRT6 Suppresses Pancreatic Cancer through Control of Lin28b.	Cell	2016
26829751	MYB-QKI rearrangements in angiocentric glioma drive tumorigenicity through a tripartite mechanism.	Nat Genet	2016
27403729	Unbiased Deep Sequencing of RNA Viruses from Clinical Samples.	J Vis Exp	2016
27163788	Differences in the Selection Bottleneck between Modes of Sexual Transmission Influence the Genetic Composition of the HIV-1 Founder Virus.	PLoS Pathog	2016
26091036	Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone.	Cell	2015
25915124	The histone deacetylase SIRT6 controls embryonic stem cell fate via TET-mediated production of 5-hydroxymethylcytosine.	Nat Cell Biol	2015
26276630	Clinical Sequencing Uncovers Origins and Evolution of Lassa Virus.	Cell	2015
25214632	Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak.	Science	2014
25403361	Enhanced methods for unbiased deep sequencing of Lassa and Ebola RNA viruses from clinical and biological samples.	Genome Biol	2014
22814851	Rapid evolution of HIV-1 to functional CD8âº T cell responses in humanized BLT mice.	Science Translational Medicine	2012
22412369	Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection.	PLoS Pathog	2012
23023123	Vaccine-induced CD8+ T cells control AIDS virus replication.	Nature	2012
21880756	Compensatory mutations restore the replication defects caused by cytotoxic T lymphocyte escape mutations in hepatitis C virus polymerase.	Journal of Virology	2011
19036810	Protective HLA class I alleles that restrict acute-phase CD8+ T-cell responses are associated with viral escape mutations located in highly conserved regions of human immunodeficiency virus type 1.	J Virol	2009
19091871	Transmission and long-term stability of compensated CD8 escape mutations.	J Virol	2009
18625749	Immune-driven recombination and loss of control after HIV superinfection.	Journal of Experimental Medicine	2008
17065207	Rapid reversion of sequence polymorphisms dominates early human immunodeficiency virus type 1 evolution.	Journal of Virology	2007