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Author Details

Parag Mallick
Stanford University
2000
86
36
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37196763An Inflection Point in Cancer Protein Biomarkers: What was and What's Next.Mol Cell Proteomics2023
37196763An Inflection Point in Cancer Protein Biomarkers: What was and What's Next.Mol Cell Proteomics2023
36112679A flexible electronic strain sensor for the real-time monitoring of tumor regression.Sci Adv2022
36112679A flexible electronic strain sensor for the real-time monitoring of tumor regression.Sci Adv2022
35739399Nano-omics: nanotechnology-based multidimensional harvesting of the blood-circulating cancerome.Nat Rev Clin Oncol2022
35739399Nano-omics: nanotechnology-based multidimensional harvesting of the blood-circulating cancerome.Nat Rev Clin Oncol2022
34266469Transcriptome and genome evolution during HER2-amplified breast neoplasia.Breast Cancer Res2021
34266469Transcriptome and genome evolution during HER2-amplified breast neoplasia.Breast Cancer Res2021
34620912Modular fluorescent nanoparticle DNA probes for detection of peptides and proteins.Sci Rep2021
34664512Epidemiological Profile and Clinicopathological, Therapeutic, and Prognostic Characteristics of Nasopharyngeal Carcinoma in Northern Morocco.Cancer Control2021
34664512Epidemiological Profile and Clinicopathological, Therapeutic, and Prognostic Characteristics of Nasopharyngeal Carcinoma in Northern Morocco.Cancer Control2021
34620912Modular fluorescent nanoparticle DNA probes for detection of peptides and proteins.Sci Rep2021
32778050ImmunoGlobe: enabling systems immunology with a manually curated intercellular immune interaction network.BMC Bioinformatics2020
31797620PTR Explorer: An approach to identify and explore Post Transcriptional Regulatory mechanisms using proteogenomics.Pac Symp Biocomput2020
33028917Multicompartment modeling of protein shedding kinetics during vascularized tumor growth.Sci Rep2020
32778050ImmunoGlobe: enabling systems immunology with a manually curated intercellular immune interaction network.BMC Bioinformatics2020
31797620PTR Explorer: An approach to identify and explore Post Transcriptional Regulatory mechanisms using proteogenomics.Pac Symp Biocomput2020
33028917Multicompartment modeling of protein shedding kinetics during vascularized tumor growth.Sci Rep2020
30671891Improving Precursor Selectivity in Data-Independent Acquisition Using Overlapping Windows.J Am Soc Mass Spectrom2019
32368363Geostatistical visualization of ecological interactions in tumors.Proceedings (IEEE Int Conf Bioinformatics Biomed)2019
30575818Loss of ER retention motif of AGR2 can impact mTORC signaling and promote cancer metastasis.Oncogene2019
30864323Semantic workflows for benchmark challenges: Enhancing comparability, reusability and reproducibility.Pac Symp Biocomput2019
30671891Improving Precursor Selectivity in Data-Independent Acquisition Using Overlapping Windows.J Am Soc Mass Spectrom2019
32368363Geostatistical visualization of ecological interactions in tumors.Proceedings (IEEE Int Conf Bioinformatics Biomed)2019
30864323Semantic workflows for benchmark challenges: Enhancing comparability, reusability and reproducibility.Pac Symp Biocomput2019
30575818Loss of ER retention motif of AGR2 can impact mTORC signaling and promote cancer metastasis.Oncogene2019
29218898Building trans-omics evidence: using imaging and 'omics' to characterize cancer profiles.Pac Symp Biocomput2018
30450002Imitating Pathologist Based Assessment With Interpretable and Context Based Neural Network Modeling of Histology Images.Biomed Inform Insights2018
29927613A Bayesian Active Learning Experimental Design for Inferring Signaling Networks.J Comput Biol2018
30017829Proteogenomic Analysis of Surgically Resected Lung Adenocarcinoma.J Thorac Oncol2018
29273356Global Transcriptome Analysis of RNA Abundance Regulation by ADAR in Lung Adenocarcinoma.EBioMedicine2018
29443976How many human proteoforms are there?Nat Chem Biol2018
29619344The Predictive Value of Inflammation-Related Peripheral Blood Measurements in Cancer Staging and Prognosis.Front Oncol2018
29218898Building trans-omics evidence: using imaging and 'omics' to characterize cancer profiles.Pac Symp Biocomput2018
29700384A Temporal Examination of Platelet Counts as a Predictor of Prognosis in Lung, Prostate, and Colon Cancer Patients.Sci Rep2018
29695737Multi-lectin Affinity Chromatography and Quantitative Proteomic Analysis Reveal Differential Glycoform Levels between Prostate Cancer and Benign Prostatic Hyperplasia Sera.Sci Rep2018
29507628Longitudinal Multiplexed Measurement of Quantitative Proteomic Signatures in Mouse Lymphoma Models Using Magneto-Nanosensors.Theranostics2018
29689709A blood biomarker for monitoring response to anti-EGFR therapy.Cancer Biomark2018
30017829Proteogenomic Analysis of Surgically Resected Lung Adenocarcinoma.J Thorac Oncol2018
29927613A Bayesian Active Learning Experimental Design for Inferring Signaling Networks.J Comput Biol2018
30450002Imitating Pathologist Based Assessment With Interpretable and Context Based Neural Network Modeling of Histology Images.Biomed Inform Insights2018
29700384A Temporal Examination of Platelet Counts as a Predictor of Prognosis in Lung, Prostate, and Colon Cancer Patients.Sci Rep2018
29695737Multi-lectin Affinity Chromatography and Quantitative Proteomic Analysis Reveal Differential Glycoform Levels between Prostate Cancer and Benign Prostatic Hyperplasia Sera.Sci Rep2018
29443976How many human proteoforms are there?Nat Chem Biol2018
29689709A blood biomarker for monitoring response to anti-EGFR therapy.Cancer Biomark2018
29507628Longitudinal Multiplexed Measurement of Quantitative Proteomic Signatures in Mouse Lymphoma Models Using Magneto-Nanosensors.Theranostics2018
29619344The Predictive Value of Inflammation-Related Peripheral Blood Measurements in Cancer Staging and Prognosis.Front Oncol2018
29273356Global Transcriptome Analysis of RNA Abundance Regulation by ADAR in Lung Adenocarcinoma.EBioMedicine2018
28566434JUN-Mediated Downregulation of EGFR Signaling Is Associated with Resistance to Gefitinib in EGFR-mutant NSCLC Cell Lines.Mol Cancer Ther2017
28990786Longitudinal Monitoring of Antibody Responses against Tumor Cells Using Magneto-nanosensors with a Nanoliter of Blood.Nano Lett2017
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Collaborators

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Co-authored papers 13
university of california los angeles
Co-authored papers 7
Institute for Systems Biology
Co-authored papers 6
Stanford University
Co-authored papers 5
Khoury College of Computer Sciences, Northeastern University
Co-authored papers 5
University of Washington
Co-authored papers 5
Co-authored papers 4
University of Michigan ann arbor
Co-authored papers 4
Co-authored papers 4
University of Washington
Co-authored papers 3
Stanford University School of Medicine
Co-authored papers 3
University of Texas MD Anderson Cancer Center
Co-authored papers 3
Institute for Systems Biology
Co-authored papers 3
KTH Royal Institute of Technology
Co-authored papers 2
Office of Cancer Clinical Proteomics Research, National Cancer Institute
Co-authored papers 2
Stanford University
Co-authored papers 2
The Ohio State University College of Medicine
Co-authored papers 2
Co-authored papers 2
Co-authored papers 2
Beijing Hospital of Traditional Chinese Medicine, Capital Medical University
Co-authored papers 2
Co-authored papers 2
Center for Computational Biology (CCB), Flatiron Institute, Simons Foundation
Co-authored papers 2
Institute for Systems Biology
Co-authored papers 2
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Princess Margaret Cancer Centre, University Health Network
Co-authored papers 2
Pacific Northwest National Laboratory
Co-authored papers 1
University of Salzburg
Co-authored papers 1
Co-authored papers 1
ETH Zurich
Co-authored papers 1
Northwestern University
Co-authored papers 1