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Author Details

James T Kadonaga
University of California
1983
145
74
PMIDPaper TitleJournal TitlePublished Year
37061952Letters to the Editor.Genes Dev2023
37751740RANK ligand converts the NCoR/HDAC3 co-repressor to a PGC1β- and RNA-dependent co-activator of osteoclast gene expression.Mol Cell2023
37748834Perspectives on ATP-dependent chromatin remodeling.Enzymes2023
37061952Letters to the Editor.Genes Dev2023
37163335Analysis of the <i>Drosophila</i> and human DPR elements reveals a distinct human variant whose specificity can be enhanced by machine learning.Genes Dev2023
37751740RANK ligand converts the NCoR/HDAC3 co-repressor to a PGC1β- and RNA-dependent co-activator of osteoclast gene expression.Mol Cell2023
37748834Perspectives on ATP-dependent chromatin remodeling.Enzymes2023
37163335Analysis of the <i>Drosophila</i> and human DPR elements reveals a distinct human variant whose specificity can be enhanced by machine learning.Genes Dev2023
35273076NDF is a transcription factor that stimulates elongation by RNA polymerase II.Genes Dev2022
35273076NDF is a transcription factor that stimulates elongation by RNA polymerase II.Genes Dev2022
33889671Reconstitution of Chromatin by Stepwise Salt Dialysis.Bio Protoc2021
33889671Reconstitution of Chromatin by Stepwise Salt Dialysis.Bio Protoc2021
32343230Enhancement of homology-directed repair with chromatin donor templates in cells.Elife2020
32343230Enhancement of homology-directed repair with chromatin donor templates in cells.Elife2020
32908305Identification of the human DPR core promoter element using machine learning.Nature2020
32908305Identification of the human DPR core promoter element using machine learning.Nature2020
31053615The RNA Polymerase II Core Promoter in <i>Drosophila</i>.Genetics2019
31571581The tardigrade damage suppressor protein binds to nucleosomes and protects DNA from hydroxyl radicals.Elife2019
30867290Molecular basis of chromatin remodeling by Rhp26, a yeast CSB ortholog.Proc Natl Acad Sci U S A2019
31053615The RNA Polymerase II Core Promoter in <i>Drosophila</i>.Genetics2019
30998799Identification of evolutionarily conserved downstream core promoter elements required for the transcriptional regulation of Fushi tarazu target genes.PLoS One2019
31439939The transformation of the DNA template in RNA polymerase II transcription: a historical perspective.Nat Struct Mol Biol2019
31439939The transformation of the DNA template in RNA polymerase II transcription: a historical perspective.Nat Struct Mol Biol2019
31571581The tardigrade damage suppressor protein binds to nucleosomes and protects DNA from hydroxyl radicals.Elife2019
30867290Molecular basis of chromatin remodeling by Rhp26, a yeast CSB ortholog.Proc Natl Acad Sci U S A2019
30998799Identification of evolutionarily conserved downstream core promoter elements required for the transcriptional regulation of Fushi tarazu target genes.PLoS One2019
29759984NDF, a nucleosome-destabilizing factor that facilitates transcription through nucleosomes.Genes Dev2018
29759984NDF, a nucleosome-destabilizing factor that facilitates transcription through nucleosomes.Genes Dev2018
28808065The punctilious RNA polymerase II core promoter.Genes Dev2017
28982979A simple and versatile system for the ATP-dependent assembly of chromatin.J Biol Chem2017
28808065The punctilious RNA polymerase II core promoter.Genes Dev2017
28108474The human initiator is a distinct and abundant element that is precisely positioned in focused core promoters.Genes Dev2017
28108474The human initiator is a distinct and abundant element that is precisely positioned in focused core promoters.Genes Dev2017
28982979A simple and versatile system for the ATP-dependent assembly of chromatin.J Biol Chem2017
25639469Human promoters are intrinsically directional.Mol Cell2015
25639469Human promoters are intrinsically directional.Mol Cell2015
26767995Prenucleosomes and Active Chromatin.Cold Spring Harb Symp Quant Biol2015
26080409MPE-seq, a new method for the genome-wide analysis of chromatin structure.Proc Natl Acad Sci U S A2015
26545075Perspectives on Unidirectional versus Divergent Transcription.Mol Cell2015
26680301The prenucleosome, a stable conformational isomer of the nucleosome.Genes Dev2015
26545075Perspectives on Unidirectional versus Divergent Transcription.Mol Cell2015
26680301The prenucleosome, a stable conformational isomer of the nucleosome.Genes Dev2015
26767995Prenucleosomes and Active Chromatin.Cold Spring Harb Symp Quant Biol2015
26080409MPE-seq, a new method for the genome-wide analysis of chromatin structure.Proc Natl Acad Sci U S A2015
24958592TRF2, but not TBP, mediates the transcription of ribosomal protein genes.Genes Dev2014
25274724TRF2 and the evolution of the bilateria.Genes Dev2014
25512493Regulation of the Rhp26ERCC6/CSB chromatin remodeler by a novel conserved leucine latch motif.Proc Natl Acad Sci U S A2014
24866343The annealing helicase and branch migration activities of Drosophila HARP.PLoS One2014
24958592TRF2, but not TBP, mediates the transcription of ribosomal protein genes.Genes Dev2014
25512493Regulation of the Rhp26ERCC6/CSB chromatin remodeler by a novel conserved leucine latch motif.Proc Natl Acad Sci U S A2014
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Collaborators

Co-authored papers 11
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Tokyo University of Science
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College of Veterinary Medicine, Washington State University
Co-authored papers 5
Humboldt University
Co-authored papers 4
University of California San Diego
Co-authored papers 4
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The University of North Carolina at Chapel Hill
Co-authored papers 3
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Stanford University
Co-authored papers 2
The Scripps Research Institute
Co-authored papers 2
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Center for Epigenomics, University of California San Diego
Co-authored papers 2
Michigan State University College of Human Medicine
Co-authored papers 2
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U.C. San Diego School of Medicine
Co-authored papers 2
Co-authored papers 1
Stowers Institute for Medical Research, University of Kansas School of Medicine
Co-authored papers 1
Co-authored papers 1
The Scripps Research Institute
Co-authored papers 1
Center for Cancer Research, National Cancer Institute, National Institutes of Health
Co-authored papers 1
University of California Berkeley
Co-authored papers 1
Howard Hughes Medical Institute
Co-authored papers 1
University of California San Diego
Co-authored papers 1
IBM Thomas J Watson Research Center, University of California Los Angeles, University of North Carolina at Chapel Hill
Co-authored papers 1