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Author Details

Alice Y Ting
Stanford University
1996
114
59
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36660928Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics.Plant Cell2023
37188954Engineered allostery in light-regulated LOV-Turbo enables precise spatiotemporal control of proximity labeling in living cells.Nat Methods2023
36945504Engineered allostery in light-regulated LOV-Turbo enables precise spatiotemporal control of proximity labeling in living cells.bioRxiv2023
37098770Cell-Type-Specific Intracellular Protein Delivery with Inactivated Botulinum Neurotoxin.J Am Chem Soc2023
36798302Dynamic mapping of proteome trafficking within and between living cells by TransitID.bioRxiv2023
35311648A light-gated transcriptional recorder for detecting cell-cell contacts.Elife2022
35734091A single-component luminescent biosensor for the SARS-CoV-2 spike protein.bioRxiv2022
35858434Proximity interactome analysis of Lassa polymerase reveals eRF3a/GSPT1 as a druggable target for host-directed antivirals.Proc Natl Acad Sci U S A2022
35972904Shared and Distinctive Neighborhoods of Emerin and Lamin B Receptor Revealed by Proximity Labeling and Quantitative Proteomics.J Proteome Res2022
36220098In situ cell-type-specific cell-surface proteomic profiling in mice.Neuron2022
35946312A genetic model for <i>in vivo</i> proximity labelling of the mammalian secretome.Open Biol2022
35876794A Single-Component Luminescent Biosensor for the SARS-CoV-2 Spike Protein.J Am Chem Soc2022
35320713Functional interactomes of the Ebola virus polymerase identified by proximity proteomics in the context of viral replication.Cell Rep2022
35254056A Dual-Purpose Real-Time Indicator and Transcriptional Integrator for Calcium Detection in Living Cells.ACS Synth Biol2022
35315655Deep Single-Cell-Type Proteome Profiling of Mouse Brain by Nonsurgical AAV-Mediated Proximity Labeling.Anal Chem2022
33432242Deciphering molecular interactions by proximity labeling.Nat Methods2021
33888706Proteomics of protein trafficking by in vivo tissue-specific labeling.Nat Commun2021
34675217Author Correction: TurboID-based proximity labeling reveals that UBR7 is a regulator of N NLR immune receptor-mediated immunity.Nat Commun2021
34404792Spatiotemporally-resolved mapping of RNA binding proteins via functional proximity labeling reveals a mitochondrial mRNA anchor promoting stress recovery.Nat Commun2021
34749525Proximity-Labeling Reveals Novel Host and Parasite Proteins at the <i>Toxoplasma</i> Parasitophorous Vacuole Membrane.mBio2021
34414886An engineered transcriptional reporter of protein localization identifies regulators of mitochondrial and ER membrane protein trafficking in high-throughput CRISPRi screens.Elife2021
34242576Proximity labeling reveals non-centrosomal microtubule-organizing center components required for microtubule growth and localization.Curr Biol2021
34332124A Toolbox for Efficient Proximity-Dependent Biotinylation in Zebrafish Embryos.Mol Cell Proteomics2021
32424107Split-TurboID enables contact-dependent proximity labeling in cells.Proc Natl Acad Sci U S A2020
31907448Publisher Correction: Directed evolution improves the catalytic efficiency of TEV protease.Nat Methods2020
31955847Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators.Cell2020
31819267Directed evolution improves the catalytic efficiency of TEV protease.Nat Methods2020
33139955Proximity labeling in mammalian cells with TurboID and split-TurboID.Nat Protoc2020
33308478A Molecular Calcium Integrator Reveals a Striatal Cell Type Driving Aversion.Cell2020
33323488Transcriptional readout of neuronal activity via an engineered Ca<sup>2+</sup>-activated protease.Proc Natl Acad Sci U S A2020
32839320RNA-protein interaction mapping via MS2- or Cas13-based APEX targeting.Proc Natl Acad Sci U S A2020
32553112LUZP1, a novel regulator of primary cilia and the actin cytoskeleton, is a contributing factor in Townes-Brocks Syndrome.Elife2020
30659298Molecular tools for imaging and recording neuronal activity.Nat Chem Biol2019
31657543Correction to Directed Evolution of Split APEX2 Peroxidase.ACS Chem Biol2019
31324801TurboID-based proximity labeling reveals that UBR7 is a regulator of N NLR immune receptor-mediated immunity.Nat Commun2019
31378216Correction: Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation.Elife2019
31230715Atlas of Subcellular RNA Localization Revealed by APEX-Seq.Cell2019
31535972Proximity labeling of protein complexes and cell-type-specific organellar proteomes in <i>Arabidopsis</i> enabled by TurboID.Elife2019
30942168Luciferase-LOV BRET enables versatile and specific transcriptional readout of cellular protein-protein interactions.Elife2019
30848125Directed Evolution of Split APEX2 Peroxidase.ACS Chem Biol2019
29125959Proximity labeling: spatially resolved proteomic mapping for neurobiology.Curr Opin Neurobiol2018
30125270Efficient proximity labeling in living cells and organisms with TurboID.Nat Biotechnol2018
30455320Single nucleotide polymorphisms alter kinase anchoring and the subcellular targeting of A-kinase anchoring proteins.Proc Natl Acad Sci U S A2018
28574262Beyond Immunoprecipitation: Exploring New Interaction Spaces with Proximity Biotinylation.Biochemistry2017
28441135Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation.Elife2017
28388416An Approach to Spatiotemporally Resolve Protein Interaction Networks in Living Cells.Cell2017
28131823In Situ Peroxidase Labeling and Mass-Spectrometry Connects Alpha-Synuclein Directly to Endocytic Trafficking and mRNA Metabolism in Neurons.Cell Syst2017
28238724Proximity Biotinylation as a Method for Mapping Proteins Associated with mtDNA in Living Cells.Cell Chem Biol2017
28976959RNA targeting with CRISPR-Cas13.Nature2017
29239719Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking.Elife2017
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Collaborators

Steven A Carr
Broad Institute of MIT and Harvard
Co-authored papers 24
Mark H Ellisman
National Center for Microscopy and Imaging Research, University of California
Co-authored papers 9
Vamsi K Mootha
Broad Institute of MIT and Harvard
Co-authored papers 7
Thomas J Deerinck
National Center for Microscopy and Imaging Research, University of California
Co-authored papers 7
Norbert Perrimon
Co-authored papers 4
Yanhui Hu
Co-authored papers 3
Deepak Mani
Co-authored papers 2
Melanie Ott
Gladstone Institute of Virology
Co-authored papers 2
Roger Y Tsien
University of California
Co-authored papers 2
Sarah A Slavoff
Yale University
Co-authored papers 2
Matthew Ravalin
Stanford University
Co-authored papers 2
Daniela Boassa
University of California San Diego
Co-authored papers 2
Carolyn R Bertozzi
Stanford University
Co-authored papers 2
Mark von Zastrow
University of California san francisco
Co-authored papers 2
Ugrappa Nagalakshmi
Co-authored papers 2
Rakesh K Jain
Massachusetts General Hospital, Harvard Medical School
Co-authored papers 2
Gaurav Kumar
Gladstone Institutes
Co-authored papers 2
Douglas A Lauffenburger
Massachusetts Institute of Technology
Co-authored papers 1
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University of California San Francisco
Co-authored papers 1
Ji-Hoon Cho
Co-authored papers 1
Sebastien Phan
University of California San Diego
Co-authored papers 1
Nidhi Sahni
The University of Texas MD Anderson Cancer Center
Co-authored papers 1
Guoping Feng
Co-authored papers 1
Song Yi
Livestrong Cancer Institutes, Dell Medical School, The University of Texas at Austin
Co-authored papers 1
Braden T Lobingier
Oregon Health and Science University
Co-authored papers 1
Ruth H??ttenhain
Quantitative Biosciences Institute (QBI), University of California san francisco
Co-authored papers 1
Ivan Soltesz
Stanford University
Co-authored papers 1
David Baker
University of Washington
Co-authored papers 1
Chuan He
Institute of Hematology, West China Hospital of Sichuan University
Co-authored papers 1
Boxuan Simen Zhao
The University of Chicago
Co-authored papers 1
Release 1.2