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Author Details

Arthur O Zalevsky
University of California san francisco
2015
32
11
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36420884RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning.Nucleic Acids Res2023
37790518Illuminating the Function of the Orphan Transporter, SLC22A10 in Humans and Other Primates.Res Sq2023
37609337Illuminating the Function of the Orphan Transporter, SLC22A10 in Humans and Other Primates.bioRxiv2023
34613791Molecular Coevolution of Nuclear and Nucleolar Localization Signals inside the Basic Domain of HIV-1 Tat.J Virol2022
36431078Extracellular Vesicles in Chronic Demyelinating Diseases: Prospects in Treatment and Diagnosis of Autoimmune Neurological Disorders.Life (Basel)2022
35934372SERS-based biosensor with Raman-active external responsive element for rapid determination of adenosine monophosphate.Anal Chim Acta2022
35921495Protein Design: From the Aspect of Water Solubility and Stability.Chem Rev2022
35883512Zinc Modulation of Neuronal Calcium Sensor Proteins: Three Modes of Interaction with Different Structural Outcomes.Biomolecules2022
35163108Deep Functional Profiling of Wild Animal Microbiomes Reveals Probiotic <i>Bacillus pumilus</i> Strains with a Common Biosynthetic Fingerprint.Int J Mol Sci2022
34064144Reprogramming Extracellular Vesicles for Protein Therapeutics Delivery.Pharmaceutics2021
34944467Mechanism of Zn<sup>2+</sup> and Ca<sup>2+</sup> Binding to Human S100A1.Biomolecules2021
34429510Modulation of Toll-like receptor 1 intracellular domain structure and activity by Zn<sup>2+</sup> ions.Commun Biol2021
34421525<i>In silico</i> Screening and Behavioral Validation of a Novel Peptide, LCGA-17, With Anxiolytic-Like Properties.Front Neurosci2021
34830487Disulfide Dimerization of Neuronal Calcium Sensor-1: Implications for Zinc and Redox Signaling.Int J Mol Sci2021
32854330A Fluorescent Assay to Search for Inhibitors of HIV-1 Integrase Interactions with Human Ku70 Protein, and Its Application for Characterization of Oligonucleotide Inhibitors.Biomolecules2020
31973069Membrane Binding of Neuronal Calcium Sensor-1: Highly Specific Interaction with Phosphatidylinositol-3-Phosphate.Biomolecules2020
33339818Genomic signatures of recombination in a natural population of the bdelloid rotifer Adineta vaga.Nat Commun2020
33260324Zinc Binds to RRM2 Peptide of TDP-43.Int J Mol Sci2020
32637600A kinase bioscavenger provides antibiotic resistance by extremely tight substrate binding.Sci Adv2020
32859757Multiscale computation delivers organophosphorus reactivity and stereoselectivity to immunoglobulin scavengers.Proc Natl Acad Sci U S A2020
32913388Alterations in proteome of human sclera associated with primary open-angle glaucoma involve proteins participating in regulation of the extracellular matrix.Mol Vis2020
30642123PeptoGrid-Rescoring Function for AutoDock Vina to Identify New Bioactive Molecules from Short Peptide Libraries.Molecules2019
31690330NHEJ pathway is involved in post-integrational DNA repair due to Ku70 binding to HIV-1 integrase.Retrovirology2019
31242575Mitochondria as a Source and a Target for Uremic Toxins.Int J Mol Sci2019
30682825Putative Mechanisms Underlying High Inhibitory Activities of Bimodular DNA Aptamers to Thrombin.Biomolecules2019
29267876A coarse-grained model for DNA origami.Nucleic Acids Res2018
30123127QM/MM Description of Newly Selected Catalytic Bioscavengers Against Organophosphorus Compounds Revealed Reactivation Stimulus Mediated by Histidine Residue in the Acyl-Binding Loop.Front Pharmacol2018
30713771The Preferable Binding Pose of Canonical Butyrylcholinesterase Substrates Is Unproductive for Echothiophate.Acta Naturae2018
30400225Characterization of Hydroxyproline-Containing Hairpin-Like Antimicrobial Peptide EcAMP1-Hyp from Barnyard Grass (<i>Echinochloa crusgalli</i> L.) Seeds: Structural Identification and Comparative Analysis of Antifungal Activity.Int J Mol Sci2018
28864894Evolution of catalytic centers of antibodies by virtual screening of broad repertoire of mutants using supercomputer.Dokl Biochem Biophys2017
28717247Characterization of HIV-1 integrase interaction with human Ku70 protein and initial implications for drug targeting.Sci Rep2017
26591597[Technological Perspectives in Developing Carbon Nanotube-based DNA-modified Biosensors].Biofizika2015
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Collaborators

Andrej Sali (CM4AI)
University of California San Francisco
Co-authored papers 2
Huan-Chieh Chien
University of California San Francisco
Co-authored papers 2
Megan L Koleske
Department of Pharmacy and Science for Life Laboratory, Uppsala University
Co-authored papers 2
Claudia Fontsere
Department of Pharmacy and Science for Life Laboratory, Uppsala University
Co-authored papers 2
Tomas Marques-Bonet
University of California san francisco
Co-authored papers 2
Sook Wah Yee
University of California San Francisco
Co-authored papers 2
Niklas Handin
Western Human Nutrition Research Center
Co-authored papers 2
Chunxiao Bi
University of California San Diego
Co-authored papers 1
Brian P Hudson
The State University of New Jersey
Co-authored papers 1
Jeremy Henry
University of California San Diego
Co-authored papers 1
Robert Lowe
The State University of New Jersey
Co-authored papers 1
Henry Chao
The State University of New Jersey
Co-authored papers 1
John W Newman
University of California Davis
Co-authored papers 1
Giovanni Lara
University of California san francisco
Co-authored papers 1
Sutapa Ghosh
The State University of New Jersey
Co-authored papers 1
Rachel Kramer Green
The State University of New Jersey
Co-authored papers 1
Charmi Bhikadiya
University of California San Diego
Co-authored papers 1
Jacques Dainat
Co-authored papers 1
Maria Aliseychik
Co-authored papers 1
Virginia M Artegoitia
Western Human Nutrition Research Center
Co-authored papers 1
John A Capra
Bakar Computational Health Sciences Institute, University of California san francisco
Co-authored papers 1
Yuhe Liang
The State University of New Jersey
Co-authored papers 1
Xujia Zhou
University of California san francisco
Co-authored papers 1
Kenneth Dalenberg
The State University of New Jersey
Co-authored papers 1
Benjamin Webb
University of California san francisco
Co-authored papers 1
Pol Alentorn
Institute of Evolutionary Biology (UPF-CSIC)
Co-authored papers 1
David S Goodsell
The State University of New Jersey
Co-authored papers 1
Shuchismita Dutta
The State University of New Jersey
Co-authored papers 1
Yana Rose
University of California San Diego
Co-authored papers 1
Jose M Duarte
University of California San Diego
Co-authored papers 1
Release 1.2