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Author Details

Laurel Cooper
Oregon State University
2004
24
15
PMIDPaper TitleJournal TitlePublished Year
38055832Planteome 2024 Update: Reference Ontologies and Knowledgebase for Plant Biology.Nucleic Acids Res2024
38055832Planteome 2024 Update: Reference Ontologies and Knowledgebase for Plant Biology.Nucleic Acids Res2024
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
37971715Data sharing and ontology use among agricultural genetics, genomics, and breeding databases and resources of the Agbiodata Consortium.Database (Oxford)2023
37384147Using knowledge graphs to infer gene expression in plants.Front Artif Intell2023
36866529The Gene Ontology knowledgebase in 2023.Genetics2023
37971715Data sharing and ontology use among agricultural genetics, genomics, and breeding databases and resources of the Agbiodata Consortium.Database (Oxford)2023
37384147Using knowledge graphs to infer gene expression in plants.Front Artif Intell2023
35616118GrainGenes: a data-rich repository for small grains genetics and genomics.Database (Oxford)2022
35616118GrainGenes: a data-rich repository for small grains genetics and genomics.Database (Oxford)2022
33205138The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.Patterns (N Y)2020
33205138The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.Patterns (N Y)2020
31214208The Plant Ontology Facilitates Comparisons of Plant Development Stages Across Species.Front Plant Sci2019
31214208The Plant Ontology Facilitates Comparisons of Plant Development Stages Across Species.Front Plant Sci2019
29186578The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.Nucleic Acids Res2018
30239679AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture.Database (Oxford)2018
29186578The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.Nucleic Acids Res2018
30239679AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture.Database (Oxford)2018
27589961Overview of the interactive task in BioCreative V.Database (Oxford)2016
26519402The Plant Ontology: A Tool for Plant Genomics.Methods Mol Biol2016
27589961Overview of the interactive task in BioCreative V.Database (Oxford)2016
26519402The Plant Ontology: A Tool for Plant Genomics.Methods Mol Biol2016
25562316Finding our way through phenotypes.PLoS Biol2015
25774204An ontology approach to comparative phenomics in plants.Plant Methods2015
25562316Finding our way through phenotypes.PLoS Biol2015
26713234Emerging semantics to link phenotype and environment.PeerJ2015
26252423Sequencing of 15 622 gene-bearing BACs clarifies the gene-dense regions of the barley genome.Plant J2015
26038713Genes affecting novel seed constituents in Limnanthes alba Benth: transcriptome analysis of developing embryos and a new genetic map of meadowfoam.PeerJ2015
26252423Sequencing of 15 622 gene-bearing BACs clarifies the gene-dense regions of the barley genome.Plant J2015
26713234Emerging semantics to link phenotype and environment.PeerJ2015
26038713Genes affecting novel seed constituents in Limnanthes alba Benth: transcriptome analysis of developing embryos and a new genetic map of meadowfoam.PeerJ2015
25774204An ontology approach to comparative phenomics in plants.Plant Methods2015
25584184AISO: Annotation of Image Segments with Ontologies.J Biomed Semantics2014
25584184AISO: Annotation of Image Segments with Ontologies.J Biomed Semantics2014
23327936An overview of the BioCreative 2012 Workshop Track III: interactive text mining task.Database (Oxford)2013
23220694The plant ontology as a tool for comparative plant anatomy and genomic analyses.Plant Cell Physiol2013
23327936An overview of the BioCreative 2012 Workshop Track III: interactive text mining task.Database (Oxford)2013
23220694The plant ontology as a tool for comparative plant anatomy and genomic analyses.Plant Cell Physiol2013
22847540Ontologies as integrative tools for plant science.Am J Bot2012
22847540Ontologies as integrative tools for plant science.Am J Bot2012
23160413Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR.Database (Oxford)2012
23160413Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR.Database (Oxford)2012
17359497Viability and bar expression are negatively correlated in Oregon Wolfe Barley Dominant hybrids.Plant Biotechnol J2007
17359497Viability and bar expression are negatively correlated in Oregon Wolfe Barley Dominant hybrids.Plant Biotechnol J2007
17004014High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals.Plant Mol Biol2006
17004014High-frequency Ds remobilization over multiple generations in barley facilitates gene tagging in large genome cereals.Plant Mol Biol2006
15449176Mapping Ds insertions in barley using a sequence-based approach.Mol Genet Genomics2004
15449176Mapping Ds insertions in barley using a sequence-based approach.Mol Genet Genomics2004
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Collaborators

Pankaj Jaiswal
Oregon State University
Co-authored papers 13
Christopher J Mungall
International Society for Biocuration, Lawrence Berkeley National Laboratory, University of Edinburgh, University of Edinburgh School of Biological Sciences
Co-authored papers 9
Justin Elser
Oregon State University
Co-authored papers 8
Ramona L Walls
Critical Path Institute
Co-authored papers 7
Barry Smith
University at Buffalo
Co-authored papers 5
Eva Huala
Carnegie Institution for Science
Co-authored papers 5
Tanya Z Berardini
Carnegie Institution for Science
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Marie-Ang??lique Laporte
Co-authored papers 5
Anne E Thessen
Biodiversity Information Standards, Coastal and Estuarine Research Federation, Oregon State University, Phycological Society of America, Society of Professional Consultants, The Data Detektiv, University of Colorado Anschutz Medical Campus, University of Maryland College Park, Women in the Enterprise of Science and Technology
Co-authored papers 4
Naama Menda
Boyce Thompson Institute (BTI)
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Georgios V Gkoutos
Institute of Cancer and Genomic Sciences, University of Birmingham
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Dennis W Stevenson
University of British Columbia
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Elizabeth Arnaud
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Kimberly Van Auken
California Institute of Technology
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Justin Preece
Oregon State University
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Juancarlos Chan
California Institute of Technology
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Carolyn J Lawrence
Iowa State University
Co-authored papers 3
Wasila M Dahdul
University of California irvine
Co-authored papers 3
Mary L Schaeffer
University of Missouri
Co-authored papers 3
Donghui Li
Qilu University of Technology (Shandong Academy of Sciences)
Co-authored papers 3
Paula M Mabee
University of South Dakota
Co-authored papers 3
Maria A Gandolfo
Cornell University
Co-authored papers 3
James P Balhoff
Renaissance Computing Institute, University of North Carolina
Co-authored papers 3
Taner Z Sen
USDA, Crop Improvement Genetics Research Unit, Western Regional Research Center
Co-authored papers 3
Rex T Nelson
USDA, Corn Insects and Crop Genetics Research Unit, Iowa State University
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Petra Fey
Center for Genetic Medicine, Northwestern University.
Co-authored papers 3
Jeyakumar Natarajan
Bharathiar University
Co-authored papers 2
Lisa C Harper
Corn Insects and Crop Genetics Research Unit, USDA Agricultural Research Service
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Melissa A Haendel
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Release 1.2