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Author Details

Gordon K Smyth
The University of Melbourne
1992
243
85
PMIDPaper TitleJournal TitlePublished Year
38059347Dividing out quantification uncertainty allows efficient assessment of differential transcript expression with edgeR.Nucleic Acids Res2024
38059347Dividing out quantification uncertainty allows efficient assessment of differential transcript expression with edgeR.Nucleic Acids Res2024
36710659Survey of activation-induced genome architecture reveals a novel enhancer of Myc.Immunol Cell Biol2023
37652018Venetoclax, alone and in combination with the BH3 mimetic S63845, depletes HIV-1 latently infected cells and delays rebound in humanized mice.Cell Rep Med2023
37994351Unraveling the timeline of gene expression: A pseudotemporal trajectory analysis of single-cell RNA sequencing data.F1000Res2023
37783886Benchmarking long-read RNA-sequencing analysis tools using in silico mixtures.Nat Methods2023
37147723Modeling group heteroscedasticity in single-cell RNA-seq pseudo-bulk data.Genome Biol2023
36710659Survey of activation-induced genome architecture reveals a novel enhancer of Myc.Immunol Cell Biol2023
36641753Stem cell plasticity, acetylation of H3K14, and de novo gene activation rely on KAT7.Cell Rep2023
37067487Neither random nor censored: estimating intensity-dependent probabilities for missing values in label-free proteomics.Bioinformatics2023
37173797Publisher Correction: Modeling group heteroscedasticity in single-cell RNA-seq pseudo-bulk data.Genome Biol2023
36920307Overexpression of Lmo2 initiates T-lymphoblastic leukemia via impaired thymocyte competition.J Exp Med2023
37652018Venetoclax, alone and in combination with the BH3 mimetic S63845, depletes HIV-1 latently infected cells and delays rebound in humanized mice.Cell Rep Med2023
37994351Unraveling the timeline of gene expression: A pseudotemporal trajectory analysis of single-cell RNA sequencing data.F1000Res2023
37783886Benchmarking long-read RNA-sequencing analysis tools using in silico mixtures.Nat Methods2023
37147723Modeling group heteroscedasticity in single-cell RNA-seq pseudo-bulk data.Genome Biol2023
37173797Publisher Correction: Modeling group heteroscedasticity in single-cell RNA-seq pseudo-bulk data.Genome Biol2023
37067487Neither random nor censored: estimating intensity-dependent probabilities for missing values in label-free proteomics.Bioinformatics2023
36920307Overexpression of Lmo2 initiates T-lymphoblastic leukemia via impaired thymocyte competition.J Exp Med2023
36641753Stem cell plasticity, acetylation of H3K14, and de novo gene activation rely on KAT7.Cell Rep2023
34724565The histone lysine acetyltransferase HBO1 (KAT7) regulates hematopoietic stem cell quiescence and self-renewal.Blood2022
35361962Loss of TAF8 causes TFIID dysfunction and p53-mediated apoptotic neuronal cell death.Cell Death Differ2022
35475529Molecular profiling reveals features of clinical immunity and immunosuppression in asymptomatic P. falciparum malaria.Mol Syst Biol2022
35853868Loss of TIP60 (KAT5) abolishes H2AZ lysine 7 acetylation and causes p53, INK4A, and ARF-independent cell cycle arrest.Cell Death Dis2022
35602885Blood transcriptomics identifies immune signatures indicative of infectious complications in childhood cancer patients with febrile neutropenia.Clin Transl Immunology2022
35322042R code and downstream analysis objects for the scRNA-seq atlas of normal and tumorigenic human breast tissue.Sci Data2022
34724565The histone lysine acetyltransferase HBO1 (KAT7) regulates hematopoietic stem cell quiescence and self-renewal.Blood2022
35000262In vivo genome-editing screen identifies tumor suppressor genes that cooperate with Trp53 loss during mammary tumorigenesis.Mol Oncol2022
35061506The acetyltransferase KAT7 is required for thymic epithelial cell expansion, expression of AIRE target genes, and thymic tolerance.Sci Immunol2022
35475529Molecular profiling reveals features of clinical immunity and immunosuppression in asymptomatic P. falciparum malaria.Mol Syst Biol2022
35602885Blood transcriptomics identifies immune signatures indicative of infectious complications in childhood cancer patients with febrile neutropenia.Clin Transl Immunology2022
35853868Loss of TIP60 (KAT5) abolishes H2AZ lysine 7 acetylation and causes p53, INK4A, and ARF-independent cell cycle arrest.Cell Death Dis2022
35361962Loss of TAF8 causes TFIID dysfunction and p53-mediated apoptotic neuronal cell death.Cell Death Differ2022
35000262In vivo genome-editing screen identifies tumor suppressor genes that cooperate with Trp53 loss during mammary tumorigenesis.Mol Oncol2022
35061506The acetyltransferase KAT7 is required for thymic epithelial cell expansion, expression of AIRE target genes, and thymic tolerance.Sci Immunol2022
35322042R code and downstream analysis objects for the scRNA-seq atlas of normal and tumorigenic human breast tissue.Sci Data2022
32970351Identification and characterization of the long noncoding RNA Dreg1 as a novel regulator of Gata3.Immunol Cell Biol2021
34128836High-dimensional mass cytometry identifies T cell and B cell signatures predicting reduced risk of Plasmodium vivax malaria.JCI Insight2021
34019788Targeting histone acetylation dynamics and oncogenic transcription by catalytic P300/CBP inhibition.Mol Cell2021
33811060Type 1 conventional dendritic cell fate and function are controlled by DC-SCRIPT.Sci Immunol2021
33637722Pre-mitotic genome re-organisation bookends the B cell differentiation process.Nat Commun2021
34066338Extracellular Vesicles in Synovial Fluid from Rheumatoid Arthritis Patients Contain miRNAs with Capacity to Modulate Inflammation.Int J Mol Sci2021
33950524A single-cell RNA expression atlas of normal, preneoplastic and tumorigenic states in the human breast.EMBO J2021
33665577Chromosomes distribute randomly to, but not within, human neutrophil nuclear lobes.iScience2021
34093531Procalcitonin and Interleukin-10 May Assist in Early Prediction of Bacteraemia in Children With Cancer and Febrile Neutropenia.Front Immunol2021
34187545Single cell transcriptome atlas of mouse mammary epithelial cells across development.Breast Cancer Res2021
33436846Multi-level remodelling of chromatin underlying activation of human T cells.Sci Rep2021
34320181Calling differentially methylated regions from whole genome bisulphite sequencing with DMRcate.Nucleic Acids Res2021
32970351Identification and characterization of the long noncoding RNA Dreg1 as a novel regulator of Gata3.Immunol Cell Biol2021
34927679Correction: The histone acetyltransferase HBO1 promotes efficient tip cell sprouting during angiogenesis.Development2021
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Collaborators

The University of Melbourne
Co-authored papers 28
The Walter and Eliza Hall Institute of Medical Research
Co-authored papers 11
Co-authored papers 9
Co-authored papers 9
Peter MacCallum Cancer Centre
Co-authored papers 7
Co-authored papers 7
Helmholtz Institute for Metabolic
Co-authored papers 6
The Walter and Eliza Hall Institute of Medical Research
Co-authored papers 5
Peter MacCallum Cancer Centre
Co-authored papers 5
Walter and Eliza Hall Institute of Medical Research
Co-authored papers 5
Co-authored papers 5
The University of Melbourne
Co-authored papers 5
Co-authored papers 5
Co-authored papers 4
Co-authored papers 4
Peter MacCallum Cancer Centre
Co-authored papers 4
University of Zurich
Co-authored papers 4
Technische Universitat Munchen
Co-authored papers 3
Co-authored papers 3
Co-authored papers 3
The Walter and Eliza Hall Institute of Medical Research
Co-authored papers 3
Peter MacCallum Cancer Centre
Co-authored papers 3
Walter and Eliza Hall Institute of Medical Research
Co-authored papers 2
Graduate School of Medicine, Osaka University
Co-authored papers 2
University of British Columbia
Co-authored papers 2
RIKEN Center for Integrative Medical Sciences (IMS)
Co-authored papers 2
The University of Melbourne, Peter MacCallum Cancer Centre
Co-authored papers 2
The University of Sydney
Co-authored papers 2
Center for Computational Biomedicine, Harvard Medical School
Co-authored papers 2
St Jude Children's Research Hospital
Co-authored papers 2