Skip to Main Content

Author Details

Frank R Collart
Argonne National Laboratory
1985
92
32
Andrej Sali (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
30606121Pseudomonas fluorescens increases mycorrhization and modulates expression of antifungal defense response genes in roots of aspen seedlings.BMC Plant Biol2019
31337355The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata.BMC Genomics2019
29946568Modeling the <i>Pseudomonas</i> Sulfur Regulome by Quantifying the Storage and Communication of Information.mSystems2018
28127814Transport capabilities of environmental Pseudomonads for sulfur compounds.Protein Sci2017
28377780<i>Pseudomonas fluorescens</i> Transportome Is Linked to Strain-Specific Plant Growth Promotion in Aspen Seedlings under Nutrient Stress.Front Plant Sci2017
26834754Multi-Omics Approach Identifies Molecular Mechanisms of Plant-Fungus Mycorrhizal Interaction.Front Plant Sci2016
26669591Live Cell Discovery of Microbial Vitamin Transport and Enzyme-Cofactor Interactions.ACS Chem Biol2016
25502374Predicting bacterial community assemblages using an artificial neural network approach.Methods Mol Biol2015
26332409Predicting Ecological Roles in the Rhizosphere Using Metabolome and Transportome Modeling.PLoS One2015
24423272Small-scale expression of proteins in E. coli.Methods Enzymol2014
25569960Using metabolomic and transportomic modeling and machine learning to identify putative novel therapeutic targets for antibiotic resistant Pseudomonad infections.Annu Int Conf IEEE Eng Med Biol Soc2014
24928153Modeling forest ecosystem responses to elevated carbon dioxide and ozone using artificial neural networks.J Theor Biol2014
23606130Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-coumaric acid and related aromatic acids.Proteins2013
22676709BowStrap v1.0: Assigning statistical significance to expressed genes using short-read transcriptome data.BMC Res Notes2012
22925578Characterization of transport proteins for aromatic compounds derived from lignin: benzoate derivative binding proteins.J Mol Biol2012
22577139Biophysical and structural characterization of a sequence-diverse set of solute-binding proteins for aromatic compounds.J Biol Chem2012
21250827Design and initial characterization of the SC-200 proteomics standard mixture.OMICS2011
22587810Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset.Microb Inform Exp2011
21810210Environment sensing and response mediated by ABC transporters.BMC Genomics2011
21569493Using next generation transcriptome sequencing to predict an ectomycorrhizal metabolome.BMC Syst Biol2011
20625404Using deep RNA sequencing for the structural annotation of the Laccaria bicolor mycorrhizal transcriptome.PLoS One2010
18988022"System 48" high-throughput cloning and protein expression analysis.Methods Mol Biol2009
19892172Bacterial systems for production of heterologous proteins.Methods Enzymol2009
19184529X-ray crystal structure of GarR-tartronate semialdehyde reductase from Salmonella typhimurium.J Struct Funct Genomics2009
19196979Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization.Proc Natl Acad Sci U S A2009
19244251Crystal structures of YkuI and its complex with second messenger cyclic Di-GMP suggest catalytic mechanism of phosphodiester bond cleavage by EAL domains.J Biol Chem2009
17876832Crystal structure of aminopeptidase N from human pathogen Neisseria meningitidis.Proteins2008
19063603Functional assignment of solute-binding proteins of ABC transporters using a fluorescence-based thermal shift assay.Biochemistry2008
18657620Addressing Shewanella oneidensis "cytochromome": the first step towards high-throughput expression of cytochromes c.Protein Expr Purif2008
18275130Efficient site-specific labeling of proteins via cysteines.Bioconjug Chem2008
18235434Protein production and purification.Nat Methods2008
17363272New vectors for co-expression of proteins: structure of Bacillus subtilis ScoAB obtained by high-throughput protocols.Protein Expr Purif2007
17962405Crystal structure of an apo form of Shigella flexneri ArsH protein with an NADPH-dependent FMN reductase activity.Protein Sci2007
17586767The 2.2 A resolution crystal structure of Bacillus cereus Nif3-family protein YqfO reveals a conserved dimetal-binding motif and a regulatory domain.Protein Sci2007
17890649Development of BIATECH-54 standard mixtures for assessment of protein identification and relative expression.Proteomics2007
16287087The crystal structure of Aq_328 from the hyperthermophilic bacteria Aquifex aeolicus shows an ancestral histone fold.Proteins2006
17099920Time-controlled microfluidic seeding in nL-volume droplets to separate nucleation and growth stages of protein crystallization.Angew Chem Int Ed Engl2006
16862575Crystal structure of YfiR, an unusual TetR/CamR-type putative transcriptional regulator from Bacillus subtilis.Proteins2006
16927377Structure of YidB protein from Shigella flexneri shows a new fold with homeodomain motif.Proteins2006
16406573Automated purification of recombinant proteins: combining high-throughput with high yield.Protein Expr Purif2006
16498617Crystal structure of hypothetical protein YfiH from Shigella flexneri at 2 A resolution.Proteins2006
16497515An expression vector tailored for large-scale, high-throughput purification of recombinant proteins.Protein Expr Purif2006
16596646Structure of phage protein BC1872 from Bacillus cereus, a singleton with new fold.Proteins2006
16677609Primary structure-based function characterization of BRCT domain replicates in BRCA1.Biochem Biophys Res Commun2006
16688392Bacterial expression strategies for human angiogenesis proteins.J Struct Funct Genomics2006
15735308Crystal structure of a novel shikimate dehydrogenase from Haemophilus influenzae.J Biol Chem2005
16233902Crystal structures of delta1-pyrroline-5-carboxylate reductase from human pathogens Neisseria meningitides and Streptococcus pyogenes.J Mol Biol2005
159063181.6 A crystal structure of YteR protein from Bacillus subtilis, a predicted lyase.Proteins2005
16000798Characterization of citrate synthase from Geobacter sulfurreducens and evidence for a family of citrate synthases similar to those of eukaryotes throughout the Geobacteraceae.Appl Environ Microbiol2005
15593246Efficient recognition of protein fold at low sequence identity by conservative application of Psi-BLAST: application.J Mol Recognit2005
  • 1 - 50 of 92

Recommended Authors

Brandan Hillerich
Cue BioPharma Inc.
Career Start Year 2006
Number of shared co-authors 9
Thomas Clayton
Celgene/Bristol-Myers Squibb Corporation
Career Start Year 2004
Number of shared co-authors 6
Vera van Noort
Leiden University, Institute of Biology Leiden
Career Start Year 2003
Number of shared co-authors 0
Ying Xu
The China-Japan Union Hospital, Jilin University
Career Start Year 2002
Number of shared co-authors 4
Heath E Klock
Merck & Co., Inc.
Career Start Year 2002
Number of shared co-authors 6
Yunchen Gong
University of Toronto
Career Start Year 2000
Number of shared co-authors 1
Marc S Cortese
University of the Basque Country
Career Start Year 2000
Number of shared co-authors 0
Patrik D'haeseleer
Lawrence Livermore National Laboratory
Career Start Year 1999
Number of shared co-authors 4
Javier Vernal
Center for Structural Molecular Biology, Federal University of Santa Catarina
Career Start Year 1998
Number of shared co-authors 2
Marcin P Joachimiak
E O Lawrence Berkeley National Laboratory, UCSF Medical Center, University of California, Berkeley, University of Chicago
Career Start Year 1997
Number of shared co-authors 8
Ashkan Golshani
Ottawa Institute of Systems Biology, Carleton University
Career Start Year 1997
Number of shared co-authors 0
Hsiu-Ju Chiu
Joint Center for Structural Genomics
Career Start Year 1997
Number of shared co-authors 6
Christopher T Workman
Technical University of Denmark
Career Start Year 1995
Number of shared co-authors 0
Jeremy D Selengut
Craig Venter Institute, 9704 Medical Center Drive
Career Start Year 1994
Number of shared co-authors 3
Matthew W Vetting
Albert Einstein College of Medicine
Career Start Year 1994
Number of shared co-authors 6
Heidi J Sofia
National Human Genome Research Institute
Career Start Year 1993
Number of shared co-authors 0
Constance J Jeffery
University of Illinois at Chicago
Career Start Year 1993
Number of shared co-authors 0
Marc R Wilkins
University of New South Wales
Career Start Year 1992
Number of shared co-authors 2
Istv??n Nagy
Institute of Biochemistry, HUN-REN Biological Research Centre
Career Start Year 1991
Number of shared co-authors 1
Marc-Andr?? Elsliger
Joint Center for Structural Genomics
Career Start Year 1989
Number of shared co-authors 7
Mark W Knuth
Joint Center for Structural Genomics
Career Start Year 1988
Number of shared co-authors 7
Donald D Lorimer
Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Career Start Year 1986
Number of shared co-authors 14
Tomohiro Tamura
National Institute of Advanced Industrial Science and Technology (AIST)
Career Start Year 1985
Number of shared co-authors 1
Neil D Clarke
Yale-NUS College Singapore
Career Start Year 1981
Number of shared co-authors 0
Enrique Querol
Institut de Biotecnologia i Biomedicina, Universitat Autonoma de Barcelona
Career Start Year 1980
Number of shared co-authors 2
Chris Sander
Broad Institute of MIT and Harvard
Career Start Year 1979
Number of shared co-authors 2
Anthony R Kerlavage
National Cancer Institute
Career Start Year 1979
Number of shared co-authors 1
Antoine Danchin
University of Hong Kong
Career Start Year 1969
Number of shared co-authors 6
Ronald W Davis
Stanford University
Career Start Year 1968
Number of shared co-authors 3
Milton H Saier
University of California at San Diego
Career Start Year 1951
Number of shared co-authors 1

Collaborators

Andrzej Joachimiak
Center for Structural Biology of Infectious Diseases, University of Chicago
Co-authored papers 22
Irina Dementieva
Northwestern University, Feinberg School of Medicine
Co-authored papers 7
Mark I Donnelly
Midwest Center for Structural Genomics, Argonne National Laboratory
Co-authored papers 6
Lucy Stols
Midwest Center for Structural Genomics, Argonne National Laboratory
Co-authored papers 5
Min Zhou
College of Materials Science and Engineering, Hunan University
Co-authored papers 4
Youngchang Kim
Argonne National Laboratory
Co-authored papers 4
Gyorgy Babnigg
Argonne National Laboratory
Co-authored papers 3
Roger Higdon
Co-authored papers 3
William H Eschenfeldt
Midwest Center for Structural Genomics, Argonne National Laboratory
Co-authored papers 3
Eugene Kolker
Co-authored papers 3
Ruiying Wu
Argonne National Laboratory
Co-authored papers 3
Natali Kolker
Co-authored papers 3
Raymond C Stevens
iHuman Institute, ShanghaiTech University
Co-authored papers 2
Mary S Lipton
Pacific Northwest National Laboratory
Co-authored papers 2
Gary J Olsen
University of Illinois
Co-authored papers 2
Richard D Smith
Pacific Northwest National Laboratory
Co-authored papers 1
Joel L Sussman
Weizmann Institute of Science
Co-authored papers 1
Sirano Dhe-Paganon
Dana-Farber Cancer Institute
Co-authored papers 1
Mei Jiang
The University of Texas MD Anderson Cancer Center
Co-authored papers 1
Kristin C Gunsalus
Center for Genomics and Systems Biology, New York University Abu Dhabi (NYUAD)
Co-authored papers 1
Masayori Inouye
Robert Wood Johnson Medical School, Rutgers University
Co-authored papers 1
Gaetano T Montelione
Rensselaer Polytechnic Institute
Co-authored papers 1
Dawn Field
Biodiversity Institute, University of Oxford
Co-authored papers 1
Dwayne A Elias
Oak Ridge National Laboratory
Co-authored papers 1
Lee Ann McCue
Pacific Northwest National Laboratory
Co-authored papers 1
Ritu Shastry
Co-authored papers 1
Opher Gileadi
Structural Genomics Consortium Karolinska Institute Stockholm Sweden.
Co-authored papers 1
Zihe Rao
Nankai University
Co-authored papers 1
Ian A Wilson
The Scripps Research Institute, USA The Skaggs Institute for Chemical Biology
Co-authored papers 1
Kellie Cunningham
Co-authored papers 1
Release 1.2