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Author Details

Rhonda Bacher
University of Florida
2016
33
12
PMIDPaper TitleJournal TitlePublished Year
36082558Biomaterials-based nanoparticles conjugated to regulatory T cells provide a modular system for localized delivery of pharmacotherapeutic agents.J Biomed Mater Res A2023
37498686Human immune phenotyping reveals accelerated aging in type 1 diabetes.JCI Insight2023
37432736Responders to low-dose ATG induce CD4+ T cell exhaustion in type 1 diabetes.JCI Insight2023
36929075Analysis of Single-Cell RNA-seq Data.Methods Mol Biol2023
34850101Enhancing biological signals and detection rates in single-cell RNA-seq experiments with cDNA library equalization.Nucleic Acids Res2022
35510193Data-driven assessment of dimension reduction quality for single-cell omics data.Patterns (N Y)2022
35819783Evaluation of a Multivalent Transcriptomic Metric for Diagnosing Surgical Sepsis and Estimating Mortality Among Critically Ill Patients.JAMA Netw Open2022
33021571Single-Cell RNA-seq of Human Myeloid-Derived Suppressor Cells in Late Sepsis Reveals Multiple Subsets With Unique Transcriptional Responses: A Pilot Study.Shock2021
33545036TCR<sup>+</sup>/BCR<sup>+</sup> dual-expressing cells and their associated public BCR clonotype are not enriched in type 1 diabetes.Cell2021
34956225Overlapping but Disparate Inflammatory and Immunosuppressive Responses to SARS-CoV-2 and Bacterial Sepsis: An Immunological Time Course Analysis.Front Immunol2021
34491912Identification of direct transcriptional targets of NFATC2 that promote β cell proliferation.J Clin Invest2021
34484194A Novel Single Cell RNA-seq Analysis of Non-Myeloid Circulating Cells in Late Sepsis.Front Immunol2021
34599187CD177 modulates the function and homeostasis of tumor-infiltrating regulatory T cells.Nat Commun2021
34146085Normalization by distributional resampling of high throughput single-cell RNA-sequencing data.Bioinformatics2021
34361995Chronic Critical Illness Elicits a Unique Circulating Leukocyte Transcriptome in Sepsis Survivors.J Clin Med2021
33419759Genetic Composition and Autoantibody Titers Model the Probability of Detecting C-Peptide Following Type 1 Diabetes Diagnosis.Diabetes2021
33441381Exocrine Pancreatic Enzymes Are a Serological Biomarker for Type 1 Diabetes Staging and Pancreas Size.Diabetes2021
32351504Human Regulatory T Cells From Umbilical Cord Blood Display Increased Repertoire Diversity and Lineage Stability Relative to Adult Peripheral Blood.Front Immunol2020
31826866Insulin-Like Growth Factor Dysregulation Both Preceding and Following Type 1 Diabetes Diagnosis.Diabetes2020
32986734Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis.PLoS One2020
32670283Identification of Unique mRNA and miRNA Expression Patterns in Bone Marrow Hematopoietic Stem and Progenitor Cells After Trauma in Older Adults.Front Immunol2020
30758817Normalization for Single-Cell RNA-Seq Data Analysis.Methods Mol Biol2019
31815944Automated minute scale RNA-seq of pluripotent stem cell differentiation reveals early divergence of human and mouse gene expression kinetics.PLoS Comput Biol2019
31461642An In Vitro Human Segmentation Clock Model Derived from Embryonic Stem Cells.Cell Rep2019
29678445Spatial patterns of gene expression are unveiled in the chick primitive streak by ordering single-cell transcriptomes.Dev Biol2018
30326833Trendy: segmented regression analysis of expression dynamics in high-throughput ordered profiling experiments.BMC Bioinformatics2018
29567659Genetic Drivers of Pancreatic Islet Function.Genetics2018
28550015Statistical Methods for Latent Class Quantitative Trait Loci Mapping.Genetics2017
28424612An Examination of Brain Abnormalities and Mobility in Individuals with Mild Cognitive Impairment and Alzheimer's Disease.Front Aging Neurosci2017
28179190Species-specific developmental timing is maintained by pluripotent stem cells ex utero.Dev Biol2017
28418000SCnorm: robust normalization of single-cell RNA-seq data.Nat Methods2017
29240790Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress.PLoS Biol2017
27052890Design and computational analysis of single-cell RNA-sequencing experiments.Genome Biol2016
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Collaborators

Christina Kendziorski
University of Wisconsin-Madison
Co-authored papers 12
Todd M Brusko
College of Medicine, Diabetes Institute, University of Florida
Co-authored papers 10
Ron Stewart
Co-authored papers 7
James A Thomson
Co-authored papers 7
Philip A Efron
University of Florida Health
Co-authored papers 6
Lyle L Moldawer
University of Florida College of Medicine.
Co-authored papers 5
Scott Swanson
Co-authored papers 5
Maigan A Brusko
University of Florida
Co-authored papers 5
Scott C Brakenridge
Harborview Medical Center, The University of Washington
Co-authored papers 5
Jaimar C Rincon
University of Florida
Co-authored papers 4
Clive Wasserfall
Co-authored papers 4
Marvin L Dirain
University of Florida College of Medicine
Co-authored papers 4
Ricardo Ungaro
University of Florida College of Medicine
Co-authored papers 4
Tyler J Loftus
University of Florida Health
Co-authored papers 4
Alicia M Mohr
University of Florida.
Co-authored papers 4
Henry V Baker
College of Medicine, University of Florida
Co-authored papers 3
Frederick A Moore
Forensic and Scientific Services
Co-authored papers 3
Russell B Hawkins
University of Florida College of Medicine
Co-authored papers 3
Maria-Cecilia Lopez
College of Medicine, University of Florida
Co-authored papers 3
Azra Bihorac
University of Florida, Univerzitet u Sarajevu Medicinski Fakultet
Co-authored papers 3
Michael P Kladde
University of Florida
Co-authored papers 3
Dina C Nacionales
University of Florida
Co-authored papers 2
Zhongkai Wang
The Affiliated Hospital of Xuzhou Medical University
Co-authored papers 2
Audrey P Gasch
University of Wisconsin-Madison
Co-authored papers 2
Gabriela Ghita
University of Florida College of Public Health and Health Professions
Co-authored papers 2
Julie A Stortz
University of Florida College of Medicine
Co-authored papers 2
Michael A Newton
University of Wisconsin School of Medicine and Public Health
Co-authored papers 1
Timothy E Sweeney
Inflammatix Inc.
Co-authored papers 1
Brittany P Fenner
University of Florida College of Medicine
Co-authored papers 1
McKenzie K Hollen
University of Florida
Co-authored papers 1
Release 1.2