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Author Details

Bony De Kumar
University of North Dakota School of Medicine
2011
24
14
Wade Schulz (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36682583DNA methylation of the promoter region at the CREB1 binding site is a mechanism for the epigenetic regulation of brain-specific PKMζ.Biochim Biophys Acta Gene Regul Mech2023
37973875Transcriptional responses of cancer cells to heat shock-inducing stimuli involve amplification of robust HSF1 binding.Nat Commun2023
37676733Multiscale genetic architecture of donor-recipient differences reveals intronic LIMS1 mismatches associated with kidney transplant survival.J Clin Invest2023
37102683Shared retinoic acid responsive enhancers coordinately regulate nascent transcription of Hoxb coding and non-coding RNAs in the developing mouse neural tube.Development2023
36803844Utility of promoter hypermethylation in malignant risk stratification of intraductal papillary mucinous neoplasms.Clin Epigenetics2023
35399324Rapid emergence of SARS-CoV-2 Omicron variant is associated with an infection advantage over Delta in vaccinated persons.Med2022
35480627Comparative transmissibility of SARS-CoV-2 variants Delta and Alpha in New England, USA.Cell Rep Med2022
34310923Analysis of lamprey meis genes reveals that conserved inputs from Hox, Meis and Pbx proteins control their expression in the hindbrain and neural tube.Dev Biol2021
33546292Genome-Wide Binding Analyses of HOXB1 Revealed a Novel DNA Binding Motif Associated with Gene Repression.J Dev Biol2021
34642698Comparative transmissibility of SARS-CoV-2 variants Delta and Alpha in New England, USA.medRxiv2021
34102167The Hox protein conundrum: The "specifics" of DNA binding for Hox proteins and their partners.Dev Biol2021
34247146Autocrine GMCSF Signaling Contributes to Growth of HER2<sup>+</sup> Breast Leptomeningeal Carcinomatosis.Cancer Res2021
33184220A six-amino-acid motif is a major determinant in functional evolution of HOX1 proteins.Genes Dev2020
31111645Hox genes: Downstream "effectors" of retinoic acid signaling in vertebrate embryogenesis.Genesis2019
30867425A Hox-TALE regulatory circuit for neural crest patterning is conserved across vertebrates.Nat Commun2019
29727682Retinoid-Sensitive Epigenetic Regulation of the Hoxb Cluster Maintains Normal Hematopoiesis and Inhibits Leukemogenesis.Cell Stem Cell2018
28584089Dynamic regulation of Nanog and stem cell-signaling pathways by Hoxa1 during early neuro-ectodermal differentiation of ES cells.Proc Natl Acad Sci U S A2017
28982536Hoxa1 targets signaling pathways during neural differentiation of ES cells and mouse embryogenesis.Dev Biol2017
28784834HOXA1 and TALE proteins display cross-regulatory interactions and form a combinatorial binding code on HOXA1 targets.Genome Res2017
27034976HOXs and lincRNAs: Two sides of the same coin.Sci Adv2016
26025802Analysis of dynamic changes in retinoid-induced transcription and epigenetic profiles of murine Hox clusters in ES cells.Genome Res2015
25151158Hox complex analysis through BAC recombineering.Methods Mol Biol2014
23260668Poised RNA polymerase II changes over developmental time and prepares genes for future expression.Cell Rep2012
21764852Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC).Genes Dev2011
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Collaborators

Brian D Slaughter
Stowers Institute for Medical Research
Co-authored papers 4
Jay R Unruh
Stowers Institute for Medical Research
Co-authored papers 4
Nathan D Grubaugh
Yale School of Public Health
Co-authored papers 3
Marie L Landry
Yale School of Medicine
Co-authored papers 3
Joseph R Fauver
University of Nebraska Medical Center
Co-authored papers 3
Chantal B F Vogels
Yale School of Public Health
Co-authored papers 3
Julia Zeitlinger
Stowers Institute for Medical Research, University of Kansas School of Medicine
Co-authored papers 3
David R Peaper
Yale University School of Medicine
Co-authored papers 3
Daniel J Park
Broad Institute of MIT and Harvard
Co-authored papers 2
Pardis C Sabeti
Harvard University
Co-authored papers 2
Ali Shilatifard
Northwestern University Feinberg School of Medicine
Co-authored papers 2
Kaya Bilguvar
Acibadem Mehmet Ali Aydinlar University
Co-authored papers 2
Ryan Tewhey
University of Maine
Co-authored papers 2
Chaney C Kalinich
Yale School of Public Health
Co-authored papers 1
Isabel M Ott
Yale School of Public Health
Co-authored papers 1
Robert Tobias Koch
Yale School of Public Health
Co-authored papers 1
Anne M Hahn
Yale School of Public Health
Co-authored papers 1
Catherine M Brown
Hinton State Laboratory Institute
Co-authored papers 1
Joshua L Warren
Yale School of Public Health
Co-authored papers 1
Rebecca Earnest
Yale School of Public Health
Co-authored papers 1
Andreas Coppi
Center for Outcomes Research and Evaluation, Yale-New Haven Hospital
Co-authored papers 1
Kendall Billig
Yale School of Public Health
Co-authored papers 1
Nicholas Kerantzas
Center for Outcomes Research and Evaluation, Yale New Haven Hospital
Co-authored papers 1
Shrikant Mane
Yale School of Medicine
Co-authored papers 1
Chrispin Chaguza
Yale School of Public Health, YaleUniversity
Co-authored papers 1
Wade Schulz (CM4AI)
Yale University
Co-authored papers 1
Frederick Warner
Center for Outcomes Research and Evaluation, Yale-New Haven Hospital
Co-authored papers 1
Mallery I Breban
Yale School of Public Health
Co-authored papers 1
Christian M Pettker
Yale School of Medicine
Co-authored papers 1
Christopher Castaldi
Yale Center for Genome Analysis, Yale School of Medicine
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Release 1.2