|
| 36376589 | Metagenome-assembled genome extraction and analysis from microbiomes using KBase. | Nat Protoc | 2023 |
| 37069400 | Cohort-based learning for microbiome research community standards. | Nat Microbiol | 2023 |
| 36857575 | kb_DRAM: annotation and metabolic profiling of genomes with DRAM in KBase. | Bioinformatics | 2023 |
| 36677023 | The Importance of Sharing Data in Systems Biology. | Metabolites | 2023 |
| 36451056 | Publisher Correction: Metagenome-assembled genome extraction and analysis from microbiomes using KBase. | Nat Protoc | 2023 |
| 35961013 | A roadmap for the functional annotation of protein families: a community perspective. | Database (Oxford) | 2022 |
| 36173960 | Ten simple rules for getting and giving credit for data. | PLoS Comput Biol | 2022 |
| 32986834 | The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes. | Nucleic Acids Res | 2021 |
| 36765102 | iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology. | ISME Commun | 2021 |
| 33622857 | Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities. | mSystems | 2021 |
| 34956127 | Ontology-Enriched Specifications Enabling Findable, Accessible, Interoperable, and Reusable Marine Metagenomic Datasets in Cyberinfrastructure Systems. | Front Microbiol | 2021 |
| 33947809 | Correction for Vangay et al., "Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative's Workshop and Follow-On Activities". | mSystems | 2021 |
| 33208936 | Publisher Correction: A genomic catalog of Earth's microbiomes. | Nat Biotechnol | 2021 |
| 33179751 | The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes. | Nucleic Acids Res | 2021 |
| 32735679 | Planet Microbe: a platform for marine microbiology to discover and analyze interconnected 'omics and environmental data. | Nucleic Acids Res | 2021 |
| 32350400 | The National Microbiome Data Collaborative: enabling microbiome science. | Nat Rev Microbiol | 2020 |
| 30277308 | Novel T4 bacteriophages associated with black band disease in corals. | Environ Microbiol | 2019 |
| 31289831 | iMicrobe: Tools and data-dreaiven discovery platform for the microbiome sciences. | Gigascience | 2019 |
| 31372655 | Erratum to: iMicrobe: Tools and data-driven discovery platform for the microbiome sciences. | Gigascience | 2019 |
| 31283094 | Thermal stress modifies the marine sponge virome. | Environ Microbiol Rep | 2019 |
| 29575552 | Reef invertebrate viromics: diversity, host specificity and functional capacity. | Environ Microbiol | 2018 |
| 29073070 | Diel cycling and long-term persistence of viruses in the ocean's euphotic zone. | Proc Natl Acad Sci U S A | 2017 |
| 29158985 | Coral-associated viral communities show high levels of diversity and host auxiliary functions. | PeerJ | 2017 |
| 27375564 | HoloVir: A Workflow for Investigating the Diversity and Function of Viruses in Invertebrate Holobionts. | Front Microbiol | 2016 |
| 28066391 | CRISPR-Cas Defense System and Potential Prophages in Cyanobacteria Associated with the Coral Black Band Disease. | Front Microbiol | 2016 |
| 25708646 | Metagenomic characterization of viral communities in corals: mining biological signal from methodological noise. | Environ Microbiol | 2015 |
| 24939887 | The characterization of RNA viruses in tropical seawater using targeted PCR and metagenomics. | mBio | 2014 |
| 24847321 | Generating viral metagenomes from the coral holobiont. | Front Microbiol | 2014 |
| 23151645 | Are we missing half of the viruses in the ocean? | ISME J | 2013 |
| 19454330 | The diversity of C-type lectins in the genome of a basal metazoan, Nematostella vectensis. | Dev Comp Immunol | 2009 |
| 16879456 | Lectin/glycan interactions play a role in recognition in a coral/dinoflagellate symbiosis. | Cell Microbiol | 2006 |