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Author Details

Mehrbod Estaki
Cumming School of Medicine, University of Calgary
2013
30
14
PMIDPaper TitleJournal TitlePublished Year
36778470BIRDMAn: A Bayesian differential abundance framework that enables robust inference of host-microbe associations.bioRxiv2023
37720019Whole-body modelling reveals microbiome and genomic interactions on reduced urine formate levels in Alzheimer's disease.Res Sq2023
37095601A Mediterranean Diet Pattern Improves Intestinal Inflammation Concomitant with Reshaping of the Bacteriome in Ulcerative Colitis: A Randomised Controlled Trial.J Crohns Colitis2023
36655399Association of Subjective and Objective Measures of Sleep With Gut Microbiota Composition and Diversity in Older Men: The Osteoporotic Fractures in Men Study.J Gerontol A Biol Sci Med Sci2023
33978602Impact of Vaginal Estrogen on the Urobiome in Postmenopausal Women With Recurrent Urinary Tract Infection.Female Pelvic Med Reconstr Surg2022
35471119A Mediterranean-like fat blend protects against the development of severe colitis in the mucin-2 deficient murine model.Gut Microbes2022
35042975Correction to: Compositional and genetic alterations in Graves' disease gut microbiome reveal specific diagnostic biomarkers.ISME J2022
35293792Swapping Metagenomics Preprocessing Pipeline Components Offers Speed and Sensitivity Increases.mSystems2022
34166363Experiences and lessons learned from two virtual, hands-on microbiome bioinformatics workshops.PLoS Comput Biol2021
33512248A comparison of DNA/RNA extraction protocols for high-throughput sequencing of microbial communities.Biotechniques2021
33727399EMPress Enables Tree-Guided, Interactive, and Exploratory Analyses of Multi-omic Data Sets.mSystems2021
34589776Individuals with substance use disorders have a distinct oral microbiome pattern.Brain Behav Immun Health2021
34079079Compositional and genetic alterations in Graves' disease gut microbiome reveal specific diagnostic biomarkers.ISME J2021
34193290Candidate probiotic Lactiplantibacillus plantarum HNU082 rapidly and convergently evolves within human, mice, and zebrafish gut but differentially influences the resident microbiome.Microbiome2021
32343490QIIME 2 Enables Comprehensive End-to-End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data.Curr Protoc Bioinformatics2020
33200135A comparison of DNA/RNA extraction protocols for high-throughput sequencing of microbial communities.bioRxiv2020
33144316Correction for Estaki et al., "Physical Activity Shapes the Intestinal Microbiome and Immunity of Healthy Mice but Has No Protective Effects against Colitis in MUC2<sup>-/-</sup> Mice".mSystems2020
33024049Physical Activity Shapes the Intestinal Microbiome and Immunity of Healthy Mice but Has No Protective Effects against Colitis in MUC2<sup>-/-</sup> Mice.mSystems2020
32398661Fish oil supplementation reduces maternal defensive inflammation and predicts a gut bacteriome with reduced immune priming capacity in infants.ISME J2020
30545428Effects of Azithromycin on Behavior, Pathologic Signs, and Changes in Cytokines, Chemokines, and Neutrophil Migration in C57BL/6 Mice Exposed to Dextran Sulfate Sodium.Comp Med2019
31399723Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.Nat Biotechnol2019
31341288Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.Nat Biotechnol2019
29844409Probiotic supplementation and associated infant gut microbiome and health: a cautionary retrospective clinical comparison.Sci Rep2018
28088610The effects of voluntary wheel running on neuroinflammatory status: Role of monocyte chemoattractant protein-1.Mol Cell Neurosci2017
27502158Cardiorespiratory fitness as a predictor of intestinal microbial diversity and distinct metagenomic functions.Microbiome2016
25531801North American ginseng protects against muscle damage and reduces neutrophil infiltration after an acute bout of downhill running in rats.Appl Physiol Nutr Metab2015
25400448Interplay between intestinal alkaline phosphatase, diet, gut microbes and immunity.World J Gastroenterol2014
23527249High-intensity endurance training results in faster vessel-specific rate of vasorelaxation in type 1 diabetic rats.PLoS One2013
23405155Fish oil attenuates omega-6 polyunsaturated fatty acid-induced dysbiosis and infectious colitis but impairs LPS dephosphorylation activity causing sepsis.PLoS One2013
24217034Clinical consequences of diet-induced dysbiosis.Ann Nutr Metab2013
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Dalhousie University
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