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Author Details

Atif Shahab
2005
14
12
PMIDPaper TitleJournal TitlePublished Year
26029726Coherence analysis discriminates between retroviral integration patterns in CD34(+) cells transduced under differing clinical trial conditions.Mol Ther Methods Clin Dev2015
23029419Long span DNA paired-end-tag (DNA-PET) sequencing strategy for the interrogation of genomic structural mutations and fusion-point-guided reconstruction of amplicons.PLoS One2012
22426421A common BIM deletion polymorphism mediates intrinsic resistance and inferior responses to tyrosine kinase inhibitors in cancer.Nat Med2012
23237666Whole-genome reconstruction and mutational signatures in gastric cancer.Genome Biol2012
21467264Transcriptional consequences of genomic structural aberrations in breast cancer.Genome Res2011
21076007Deconvolution of chromatin immunoprecipitation-microarray (ChIP-chip) analysis of MBF occupancies reveals the temporal recruitment of Rep2 at the MBF target genes.Eukaryotic Cell2011
21467267Comprehensive long-span paired-end-tag mapping reveals characteristic patterns of structural variations in epithelial cancer genomes.Genome Res2011
20022974webMGR: an online tool for the multiple genome rearrangement problem.Bioinformatics2010
20921386Genome-wide analysis reveals methyl-CpG-binding protein 2-dependent regulation of microRNAs in a mouse model of Rett syndrome.Proceedings of the National Academy of Sciences of the United States of America2010
18371363Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells.Cell Stem Cell2007
18415975Quality assessment of the Affymetrix U133A&B probesets by target sequence mapping and expression data analysis.In Silico Biol2007
17571346Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.Nature2007
17568001Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs).Genome Res2007
15782207Gene identification signature (GIS) analysis for transcriptome characterization and genome annotation.Nat Methods2005
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