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Author Details

Sylvie Ricard-Blum
ICBMS UMR CNRS 5246, University Lyon 1
1982
139
46
PMIDPaper TitleJournal TitlePublished Year
36662472Building, Visualizing, and Analyzing Glycosaminoglycan-Protein Interaction Networks.Methods Mol Biol2023
37935582LeishMANIAdb: a comparative resource for Leishmania proteins.Database (Oxford)2023
37334846Conformations, interactions and functions of intrinsically disordered syndecans.Biochem Soc Trans2023
36626722Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work.J Proteome Res2023
36907428Conditional expression of endorepellin in the tumor vasculature attenuates breast cancer growth, angiogenesis and hyaluronan deposition.Matrix Biol2023
34761267The IntAct database: efficient access to fine-grained molecular interaction data.Nucleic Acids Res2022
35841830Impact of calcium ions on the structural and dynamic properties of heparin oligosaccharides by computational analysis.Comput Biol Chem2022
35544698The glycosaminoglycan interactome 2.0.Am J Physiol Cell Physiol2022
36179500Editorial overview: Protein-carbohydrate complexes and glycosylation.Curr Opin Struct Biol2022
36039382Extracellular matrix: The dynamic structural and functional network in health and disease.IUBMB Life2022
35306322Glycosaminoglycan interaction networks and databases.Curr Opin Struct Biol2022
32757871Glycosaminoglycan-Protein Interactions: The First Draft of the Glycosaminoglycan Interactome.J Histochem Cytochem2021
33794052Building Protein-Protein and Protein-Glycosaminoglycan Interaction Networks Using MatrixDB, the Extracellular Matrix Interaction Database.Curr Protoc2021
33605520A guide to the composition and functions of the extracellular matrix.FEBS J2021
35072037Multiscale modelling of the extracellular matrix.Matrix Biol Plus2021
34505054Extended disorder at the cell surface: The conformational landscape of the ectodomains of syndecans.Matrix Biol Plus2021
33305318PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins.Nucleic Acids Res2021
32566889Correction to "A 3D Model of Human Lysyl Oxidase, A Cross-Linking Enzyme".ACS Omega2020
31759052Scavenger Receptor Cysteine-Rich domains of Lysyl Oxidase-Like2 regulate endothelial ECM and angiogenesis through non-catalytic scaffolding mechanisms.Matrix Biol2020
31903639Sialic acids rather than glycosaminoglycans affect normal and sickle red blood cell rheology by binding to four major sites on fibrinogen.Am J Hematol2020
31883993Omic approaches to decipher the molecular mechanisms of fibrosis, and design new anti-fibrotic strategies.Semin Cell Dev Biol2020
33206959The IMEx coronavirus interactome: an evolving map of Coronaviridae-host molecular interactions.Database (Oxford)2020
33262342Towards a unified open access dataset of molecular interactions.Nat Commun2020
33383846The Interactome of Cancer-Related Lysyl Oxidase and Lysyl Oxidase-Like Proteins.Cancers (Basel)2020
32587962The IMEx Coronavirus interactome: an evolving map of Coronaviridae-Host molecular interactions.bioRxiv2020
29133183Fragments generated upon extracellular matrix remodeling: Biological regulators and potential drugs.Matrix Biol2019
31658765Analysis of Procollagen C-Proteinase Enhancer-1/Glycosaminoglycan Binding Sites and of the Potential Role of Calcium Ions in the Interaction.Int J Mol Sci2019
31655291A tribute to Ladislas Robert.Matrix Biol2019
30239692A pipeline to translate glycosaminoglycan sequences into 3D models. Application to the exploration of glycosaminoglycan conformational space.Glycobiology2019
31267027A comparative analysis of secreted protein disulfide isomerases from the tropical co-endemic parasites Schistosoma mansoni and Leishmania major.Sci Rep2019
31459939A Three-Dimensional Model of Human Lysyl Oxidase, a Cross-Linking Enzyme.ACS Omega2019
31488698Lysyl oxidases: from enzyme activity to extracellular matrix cross-links.Essays Biochem2019
30932318Structures and interactions of syndecans.FEBS J2019
30371822MatrixDB: integration of new data with a focus on glycosaminoglycan interactions.Nucleic Acids Res2019
29458139Molecular and tissue alterations of collagens in fibrosis.Matrix Biol2018
30082873Insights into the structure and dynamics of lysyl oxidase propeptide, a flexible protein with numerous partners.Sci Rep2018
30204432Proteoglycan Chemical Diversity Drives Multifunctional Cell Regulation and Therapeutics.Chem Rev2018
29642841Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions.BMC Bioinformatics2018
27900575Glycosaminoglycanomics: where we are.Glycoconj J2017
28106549The Multimerization State of the Amyloid-β42 Amyloid Peptide Governs its Interaction Network with the Extracellular Matrix.J Alzheimers Dis2017
28265838Glycosaminoglycans: major biological players.Glycoconj J2017
28391377Pro-angiogenic capacities of microvesicles produced by skin wound myofibroblasts.Angiogenesis2017
29209066Interaction of Complement Defence Collagens C1q and Mannose-Binding Lectin with BMP-1/Tolloid-like Proteinases.Sci Rep2017
28535337Overall Structural Model of NS5A Protein from Hepatitis C Virus and Modulation by Mutations Confering Resistance of Virus Replication to Cyclosporin A.Biochemistry2017
26869928Matricryptins Network with Matricellular Receptors at the Surface of Endothelial and Tumor Cells.Front Pharmacol2016
26382969Proteases decode the extracellular matrix cryptome.Biochimie2016
27984858Gold nanoparticles increases UV and thermal stability of human serum albumin.Biointerphases2016
27693454Decorin interacting network: A comprehensive analysis of decorin-binding partners and their versatile functions.Matrix Biol2016
27286579[Shuttling from the extracellular matrix to the nucleus].Biol Aujourdhui2016
27577973ANGPTL4-αvβ3 interaction counteracts hypoxia-induced vascular permeability by modulating Src signalling downstream of vascular endothelial growth factor receptor 2.J Pathol2016
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Collaborators

Henning Hermjakob
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 10
Emilie Chautard
Universite de Lyon, Universite Claude Bernard, CNRS UMR 5239, INSERM U1210
Co-authored papers 10
Sandra Orchard
EMBL's European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 9
Luana Licata
University of Tor Vergata
Co-authored papers 8
Gianni Cesareni
University of Rome 'Tor Vergata'
Co-authored papers 7
Noemi Del-Toro
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 6
Pablo Porras
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 6
Livia Perfetto
Department of Biology and Biotechnologies "Charles Darwin", La Sapienza University
Co-authored papers 5
Simona Panni
Universita della Calabria
Co-authored papers 5
Margaret Duesbury
Co-authored papers 5
Lukasz Salwinski
university of california los angeles
Co-authored papers 5
Marine Dumousseau
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
Igor Jurisica
Schroeder Arthritis Institute
Co-authored papers 4
Adam Liwo
Co-authored papers 3
Ruth C Lovering
University College London, Institute for Cardiovascular Science
Co-authored papers 3
Frédérique Lisacek
Co-authored papers 3
Bernd Roechert
Centre Medical Universitaire
Co-authored papers 3
Max Kotlyar
Schroeder Arthritis Institute
Co-authored papers 3
Sergey A Samsonov
Co-authored papers 3
David J Lynn
South Australian Health and Medical Research Institute
Co-authored papers 3
Matteo Pellegrini
Co-authored papers 3
Federica Quaglia
University of Padova
Co-authored papers 2
Jyoti Khadake
Cambridge University and Cambridge University Hospitals NHS Foundation Trust
Co-authored papers 2
Javier De Las Rivas
Cancer Research Centre (IBMCC/CSIC/USAL/IBSAL)
Co-authored papers 2
Dmitri I Svergun
King's College London BHF Centre for Research Excellence
Co-authored papers 2
Sameer Velankar
European Bioinformatics Institute
Co-authored papers 2
Anna N Melidoni
University of Ioannina
Co-authored papers 2
Bruno Aranda
European Bioinformatics Institute
Co-authored papers 2
Colin Combe
University of Edinburgh
Co-authored papers 2
Samuel Kerrien
Ecole polytechnique federale de Lausanne (EPFL)
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Release 1.2