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Author Details

Kai Hakala
University of Turku
2012
12
5
PMIDPaper TitleJournal TitlePublished Year
33306472Neural Network and Random Forest Models in Protein Function Prediction.IEEE/ACM Trans Comput Biol Bioinform2022
35151221Combining supervised and unsupervised named entity recognition to detect psychosocial risk factors in occupational health checks.Int J Med Inform2022
31605490Supporting the use of standardized nursing terminologies with automatic subject heading prediction: a comparison of sentence-level text classification methods.J Am Med Inform Assoc2020
32873340Assisting nurses in care documentation: from automated sentence classification to coherent document structures with subject headings.J Biomed Semantics2020
31744546The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.Genome Biol2019
30272184Data and systems for medication-related text classification and concept normalization from Twitter: insights from the Social Media Mining for Health (SMM4H)-2017 shared task.J Am Med Inform Assoc2018
30239666Wide-scope biomedical named entity recognition and normalization with CRFs, fuzzy matching and character level modeling.Database (Oxford)2018
27175227Filtering large-scale event collections using a combination of supervised and unsupervised learning for event trigger classification.J Biomed Semantics2016
27604469An expanded evaluation of protein function prediction methods shows an improvement in accuracy.Genome Biol2016
26551766Application of the EVEX resource to event extraction and network construction: Shared Task entry and result analysis.BMC Bioinformatics2015
23613707Large-scale event extraction from literature with multi-level gene normalization.PLoS One2013
22719757Exploring Biomolecular Literature with EVEX: Connecting Genes through Events, Homology, and Indirect Associations.Adv Bioinformatics2012
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Collaborators

Filip Ginter
University of Turku
Co-authored papers 11
Tapio Salakoski
University of Turku
Co-authored papers 9
Suwisa Kaewphan
University of Turku
Co-authored papers 5
Hans Moen
Aalto University
Co-authored papers 5
Farrokh Mehryary
University of Turku
Co-authored papers 5
Sanna Salanter??
60654University of Turku
Co-authored papers 3
Jari Bj??rne
University of Turku
Co-authored papers 3
Prajwal Bhat
Royal Holloway University of London
Co-authored papers 2
Claire O'Donovan
European Bioinformatics Institute
Co-authored papers 2
Asa Ben-Hur
Colorado State University
Co-authored papers 2
Richard Bonneau
Center for Computational Biology (CCB), Flatiron Institute, Simons Foundation
Co-authored papers 2
Nevena Veljkovic
Heliant Ltd
Co-authored papers 2
Branislava Gemovic
Vinca Institute of Nuclear Sciences, University of Belgrade
Co-authored papers 2
Iddo Friedberg
Iowa State University
Co-authored papers 2
David T Jones
University College London
Co-authored papers 2
Tunca Do??an
Hacettepe University
Co-authored papers 2
Steven E Brenner
University of California berkeley
Co-authored papers 2
Jos?? M Fern??ndez
Hospital Universitario y Politecnico la Fe
Co-authored papers 2
Renzhi Cao
Pacific Lutheran University
Co-authored papers 2
Indika Kahanda
University of North Florida
Co-authored papers 2
Rita Casadio
Department of Pharmacy and Biotechnology, University of Bologna
Co-authored papers 2
Sayoni Das
University College London
Co-authored papers 2
Matteo Re
Universita degli Studi di Milano
Co-authored papers 2
Burkhard Rost
Technical University of Munich (TUM)
Co-authored papers 2
Alfredo Benso
Italy Consorzio Interuniversitario Nazionale per l'Informatica
Co-authored papers 2
Giuseppe Profiti
University of Bologna
Co-authored papers 2
Christophe Dessimoz
University of Lausanne
Co-authored papers 2
Domenico Cozzetto
Imperial College London
Co-authored papers 2
Maria J Martin
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 2
Marco Mesiti
Universita degli Studi di Milano
Co-authored papers 2
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