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Author Details

Fei He
Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
2007
66
23
PMIDPaper TitleJournal TitlePublished Year
36610569Mitochondrial characteristics of the powdery mildew genus Erysiphe revealed an extraordinary evolution in protein-coding genes.Int J Biol Macromol2023
37647532Whole-genome sequencing of diverse wheat accessions uncovers genetic changes during modern breeding in China and the United States.Plant Cell2023
36945776Boosting wheat functional genomics via an indexed EMS mutant library of KN9204.Plant Commun2023
37100915Reducing brassinosteroid signalling enhances grain yield in semi-dwarf wheat.Nature2023
36919330FPR2 Shapes an Immune-Excluded Pancreatic Tumor Microenvironment and Drives T-cell Exhaustion in a Sex-Dependent Manner.Cancer Res2023
34751373Development of the Wheat Practical Haplotype Graph database as a resource for genotyping data storage and genotype imputation.G3 (Bethesda)2022
35392164Single-Cell Transcriptomics of Cultured Amniotic Fluid Cells Reveals Complex Gene Expression Alterations in Human Fetuses With Trisomy 18.Front Cell Dev Biol2022
36213829Establishment and Identification of Patient-Derived Xenograft Model for Oral Squamous Cell Carcinoma.J Oncol2022
36310582Targeting myeloid suppressive cells revives cytotoxic anti-tumor responses in pancreatic cancer.iScience2022
36070109Multiplexed promoter and gene editing in wheat using a virus-based guide RNA delivery system.Plant Biotechnol J2022
36271077Population genomics of Puccinia graminis f.sp. tritici highlights the role of admixture in the origin of virulent wheat rust races.Nat Commun2022
35278635Sex dimorphism in the tumor microenvironment - From bench to bedside and back.Semin Cancer Biol2022
35149708Genomic variants affecting homoeologous gene expression dosage contribute to agronomic trait variation in allopolyploid wheat.Nat Commun2022
34270168Expanding the range of editable targets in the wheat genome using the variants of the Cas12a and Cas9 nucleases.Plant Biotechnol J2021
33493157Polygenic adaptation of rosette growth in Arabidopsis thaliana.PLoS Genet2021
34544127Whole-genome sequencing of multiple isolates of Puccinia triticina reveals asexual lineages evolving by recurrent mutations.G3 (Bethesda)2021
34484280The Haplotype-Based Analysis of <i>Aegilops tauschii</i> Introgression Into Hard Red Winter Wheat and Its Impact on Productivity Traits.Front Plant Sci2021
34099660Cis-regulatory evolution spotlights species differences in the adaptive potential of gene expression plasticity.Nat Commun2021
32684157Differential chromatin accessibility landscape reveals structural and functional features of the allopolyploid wheat chromosomes.Genome Biol2020
30668651Arabidopsis species deploy distinct strategies to cope with drought stress.Ann Bot2019
31795914Multivariable regulation of gene expression plasticity in metazoans.Open Biol2019
31197271Publisher Correction: Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome.Nat Genet2019
31219637Gene editing of the wheat homologs of TONNEAU1-recruiting motif encoding gene affects grain shape and weight in wheat.Plant J2019
31043759Exome sequencing highlights the role of wild-relative introgression in shaping the adaptive landscape of the wheat genome.Nat Genet2019
29788048Robustness of Transposable Element Regulation but No Genomic Shock Observed in Interspecific Arabidopsis Hybrids.Genome Biol Evol2018
30215800Assortment of Flowering Time and Immunity Alleles in Natural Arabidopsis thaliana Populations Suggests Immunity and Vegetative Lifespan Strategies Coevolve.Genome Biol Evol2018
29979655KBase: The United States Department of Energy Systems Biology Knowledgebase.Nat Biotechnol2018
29952048The genetic architecture of genome-wide recombination rate variation in allopolyploid wheat revealed by nested association mapping.Plant J2018
30136108Gene editing and mutagenesis reveal inter-cultivar differences and additivity in the contribution of TaGW2 homoeologues to grain size and weight in wheat.Theor Appl Genet2018
30627700Transgenerational CRISPR-Cas9 Activity Facilitates Multiplex Gene Editing in Allopolyploid Wheat.CRISPR J2018
30266409PlaD: A Transcriptomics Database for Plant Defense Responses to Pathogens, Providing New Insights into Plant Immune System.Genomics Proteomics Bioinformatics2018
28540497Large-scale transcriptome analysis reveals arabidopsis metabolic pathways are frequently influenced by different pathogens.Plant Mol Biol2017
28193161Systematic comparison of lncRNAs with protein coding mRNAs in population expression and their response to environmental change.BMC Plant Biol2017
28403814Divergent and convergent modes of interaction between wheat and Puccinia graminis f. sp. tritici isolates revealed by the comparative gene co-expression network and genome analyses.BMC Genomics2017
29085915An Important Role for Purifying Selection in Archaeal Genome Evolution.mSystems2017
27015116Large-scale atlas of microarray data reveals the distinct expression landscape of different tissues in Arabidopsis.Plant J2016
27982071Pan- and core- network analysis of co-expression genes in a model plant.Sci Rep2016
27760135DREISS: Using State-Space Models to Infer the Dynamics of Gene Expression Driven by External and Internal Regulatory Networks.PLoS Comput Biol2016
27721457Differential Coexpression Analysis Reveals Extensive Rewiring of Arabidopsis Gene Coexpression in Response to Pseudomonas syringae Infection.Sci Rep2016
27563305Large-Scale Public Transcriptomic Data Mining Reveals a Tight Connection between the Transport of Nitrogen and Other Transport Processes in Arabidopsis.Front Plant Sci2016
27189540The Footprint of Polygenic Adaptation on Stress-Responsive Cis-Regulatory Divergence in the Arabidopsis Genus.Mol Biol Evol2016
25523393E3 ubiquitin ligases promote progression of differentiation during C. elegans embryogenesis.Dev Biol2015
26321128The Regulatory Landscape of Lineage Differentiation in a Metazoan Embryo.Dev Cell2015
24439388De novo inference of systems-level mechanistic models of development from live-imaging-based phenotype analysis.Cell2014
25471220Combination of specific single chain antibody variable fragment and siRNA has a synergistic inhibitory effect on the propagation of avian influenza virus H5N1 in chicken cells.Virol J2014
25415980Reduced Dormancy5 encodes a protein phosphatase 2C that is required for seed dormancy in Arabidopsis.Plant Cell2014
24876250miR824-Regulated AGAMOUS-LIKE16 Contributes to Flowering Time Repression in Arabidopsis.Plant Cell2014
24268985The spectrum of mutations controlling complex traits and the genetics of fitness in plants.Curr Opin Genet Dev2013
21786137Prediction of protein-protein interactions between Ralstonia solanacearum and Arabidopsis thaliana.Amino Acids2012
23253144Natural variation of H3K27me3 distribution between two Arabidopsis accessions and its association with flanking transposable elements.Genome Biol2012
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Collaborators

Sergei Maslov
University of Illinois Urbana-Champaign
Co-authored papers 5
Qianli Pan
Co-authored papers 4
Mark Gerstein
Yale University
Co-authored papers 3
Daifeng Wang
University of Wisconsin-Madison
Co-authored papers 3
Rainer Heuchel
Karolinska Institutet
Co-authored papers 2
Doreen Ware
USDA ARS NAA Robert W. Holley Center for Agriculture and Health
Co-authored papers 2
Sunita Kumari
Manav Rachna International Institute of Research and Studies
Co-authored papers 2
Shinjae Yoo
Brookhaven National Laboratory
Co-authored papers 2
Vivek Kumar
Co-authored papers 1
Nathan Tintle
The Fatty Acid Research Institute
Co-authored papers 1
Paul M Frybarger
Argonne National Laboratory
Co-authored papers 1
Pamela C Ronald
University of California davis
Co-authored papers 1
Meghan M Drake
Oak Ridge National Laboratory
Co-authored papers 1
Elizabeth M Glass
Argonne National Laboratory
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Jiangning Song
Monash Data Futures Institute, Monash University
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Kangbuk Samsung Hospital, Sungkyunkwan University School of Medicine
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Gavin A Price
E.O. Lawrence Berkeley National Laboratory
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Adam P Arkin
Lawrence Berkeley National Laboratory
Co-authored papers 1
Benjamin H Allen
Oak Ridge National Laboratory
Co-authored papers 1
Shamil R Sunyaev
Harvard Medical School
Co-authored papers 1
Marissa Mills
Oak Ridge National Laboratory
Co-authored papers 1
Thomas Brettin
University of Chicago
Co-authored papers 1
Folker Meyer
Institute for Artificial Intelligence, University of Duisburg-Essen
Co-authored papers 1
Dantong Yu
New Jersey Institute of Technology
Co-authored papers 1
Steven E Brenner
University of California berkeley
Co-authored papers 1
Christopher Bun
Argonne National Laboratory
Co-authored papers 1
Neal Conrad
University of Chicago
Co-authored papers 1
Roy T Kamimura
E.O. Lawrence Berkeley National Laboratory
Co-authored papers 1
Nomi L Harris
Lawrence Berkely National Laboratory, Massachusetts Institute of Technology, Princeton University
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Matthew DeJongh
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Release 1.2