Skip to Main Content

Author Details

Blake A Simmons
Joint BioEnergy Institute, USA Lawrence Berkeley National Laboratory
2001
246
50
PMIDPaper TitleJournal TitlePublished Year
36894634Lignin deconstruction by anaerobic fungi.Nat Microbiol2023
37665664Maximizing microbial bioproduction from sustainable carbon sources using iterative systems engineering.Cell Rep2023
37724856Simultaneous carbon catabolite repression governs sugar and aromatic co-utilization in <i>Pseudomonas putida</i> M2.Appl Environ Microbiol2023
36983539Phenothiazines Rapidly Induce Laccase Expression and Lignin-Degrading Properties in the White-Rot Fungus <i>Phlebia radiata</i>.J Fungi (Basel)2023
36691869Development of genetic tools for heterologous protein expression in a pentose-utilizing environmental isolate of Pseudomonas putida.Microb Biotechnol2023
36746778Funneled Depolymerization of Ionic Liquid-Based Biorefinery "Heterogeneous" Lignin into Guaiacols over Reusable Palladium Catalyst.Chemistry2023
36435200Rapid quantification of alcohol production in microorganisms based on nanostructure-initiator mass spectrometry (NIMS).Anal Biochem2023
36609448Multiscale molecular simulations for the solvation of lignin in ionic liquids.Sci Rep2023
36465038Revealing oxidative pentose metabolism in new Pseudomonas putida isolates.Environ Microbiol2023
36771097Valorization of Hemp-Based Packaging Waste with One-Pot Ionic Liquid Technology.Molecules2023
36603501Perspectives for self-driving labs in synthetic biology.Curr Opin Biotechnol2023
34333091Review of advances in the development of laccases for the valorization of lignin to enable the production of lignocellulosic biofuels and bioproducts.Biotechnol Adv2022
35377177Complete Genome Sequences of Five Isolated Pseudomonas Strains that Catabolize Pentose Sugars and Aromatic Compounds Obtained from Lignocellulosic Biomass.Microbiol Resour Announc2022
35858445Comparing <i>in planta</i> accumulation with microbial routes to set targets for a cost-competitive bioeconomy.Proc Natl Acad Sci U S A2022
36567331Evaluation of engineered low-lignin poplar for conversion into advanced bioproducts.Biotechnol Biofuels Bioprod2022
36482295Advanced one-pot deconstruction and valorization of lignocellulosic biomass into triacetic acid lactone using Rhodosporidium toruloides.Microb Cell Fact2022
36280858Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction.Microbiome2022
36234813Renewable Schiff-Base Ionic Liquids for Lignocellulosic Biomass Pretreatment.Molecules2022
36188638Engineering sorghum for higher 4-hydroxybenzoic acid content.Metab Eng Commun2022
35087083A new platform for ultra-high dose rate radiobiological research using the BELLA PW laser proton beamline.Sci Rep2022
33221420Machine learning for metabolic engineering: A review.Metab Eng2021
33738678Association of gene expression with syringyl to guaiacyl ratio in sugarcane lignin.Plant Mol Biol2021
33926536Experimental and theoretical insights into the effects of pH on catalysis of bond-cleavage by the lignin peroxidase isozyme H8 from Phanerochaete chrysosporium.Biotechnol Biofuels2021
33585414Multi-Omics Driven Metabolic Network Reconstruction and Analysis of Lignocellulosic Carbon Utilization in <i>Rhodosporidium toruloides</i>.Front Bioeng Biotechnol2021
33581331Engineering Saccharomyces cerevisiae for isoprenol production.Metab Eng2021
34869279Genomics Characterization of an Engineered <i>Corynebacterium glutamicum</i> in Bioreactor Cultivation Under Ionic Liquid Stress.Front Bioeng Biotechnol2021
34526022Evaluation of bacterial hosts for conversion of lignin-derived p-coumaric acid to 4-vinylphenol.Microb Cell Fact2021
34516585Bacterial diversity dynamics in microbial consortia selected for lignin utilization.PLoS One2021
34801067Overexpression of the rice BAHD acyltransferase AT10 increases xylan-bound p-coumarate and reduces lignin in Sorghum bicolor.Biotechnol Biofuels2021
34385583Plant single-cell solutions for energy and the environment.Commun Biol2021
34009716Development of dual-inducible duet-expression vectors for tunable gene expression control and CRISPR interference-based gene repression in Pseudomonas putida KT2440.Microb Biotechnol2021
34168079The F-box protein gene <i>exo</i>-<i>1</i> is a target for reverse engineering enzyme hypersecretion in filamentous fungi.Proc Natl Acad Sci U S A2021
34083602A multiplexed nanostructure-initiator mass spectrometry (NIMS) assay for simultaneously detecting glycosyl hydrolase and lignin modifying enzyme activities.Sci Rep2021
33972666Pests, diseases, and aridity have shaped the genome of Corymbia citriodora.Commun Biol2021
32220956Accumulation of high-value bioproducts <i>in planta</i> can improve the economics of advanced biofuels.Proc Natl Acad Sci U S A2020
35517195The effect of continuous tubular reactor technologies on the pretreatment of lignocellulosic biomass at pilot-scale for bioethanol production.RSC Adv2020
31950118Theoretical study on the microscopic mechanism of lignin solubilization in Keggin-type polyoxometalate ionic liquids.Phys Chem Chem Phys2020
32107379A comparative genomics study of 23 Aspergillus species from section Flavi.Nat Commun2020
33239462Whole-Genome Sequence of Brevibacillus borstelensis SDM, Isolated from a Sorghum-Adapted Microbial Community.Microbiol Resour Announc2020
33183275Conversion of poplar biomass into high-energy density tricyclic sesquiterpene jet fuel blendstocks.Microb Cell Fact2020
33298135Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots.Biotechnol Biofuels2020
32941430Lignin induced iron reduction by novel sp., Tolumonas lignolytic BRL6-1.PLoS One2020
32963959Adaptive laboratory evolution of <i>Pseudomonas putida</i> KT2440 improves <i>p</i>-coumaric and ferulic acid catabolism and tolerance.Metab Eng Commun2020
32313551Succession of physiological stages hallmarks the transcriptomic response of the fungus <i>Aspergillus niger</i> to lignocellulose.Biotechnol Biofuels2020
32185613Ionic Liquid Tolerance of Yeasts in Family Dipodascaceae and Genus Wickerhamomyces.Appl Biochem Biotechnol2020
32160408Response of Pseudomonas putida to Complex, Aromatic-Rich Fractions from Biomass.ChemSusChem2020
30273825Simultaneous application of predictive model and least cost formulation can substantially benefit biorefineries outside Corn Belt in United States: A case study in Florida.Bioresour Technol2019
31636706Relationship between sugarcane culm and leaf biomass composition and saccharification efficiency.Biotechnol Biofuels2019
31381851Conversion of Distiller's Grains to Renewable Fuels and High Value Protein: Integrated Techno-Economic and Life Cycle Assessment.Environ Sci Technol2019
31605914One-pot bio-derived ionic liquid conversion followed by hydrogenolysis reaction for biomass valorization: A promising approach affecting the morphology and quality of lignin of switchgrass and poplar.Bioresour Technol2019
  • 1 - 50 of 246

Recommended Authors

Jingxuan Cui
Tianjin University of Traditional Chinese Medicine
Career Start Year 2016
Number of shared co-authors 0
Nasrin Tavanaie
David Geffen School of Medicine, University of California los angeles
Career Start Year 2013
Number of shared co-authors 0
Weiwei Wang
Xinhua Hospital, Shanghai Jiaotong University of Medicine School
Career Start Year 2011
Number of shared co-authors 0
Yanyun Zhu
Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization
Career Start Year 2010
Number of shared co-authors 0
Jonathan M Galazka
NASA Ames Research Center
Career Start Year 2010
Number of shared co-authors 2
Yan Leng
West Yunnan University
Career Start Year 2009
Number of shared co-authors 0
Waseem Raza
Institute for Advanced Study, Shenzhen University
Career Start Year 2008
Number of shared co-authors 0
Jing Yu
College of Materials Science and Chemical Engineering, Harbin Engineering University
Career Start Year 2008
Number of shared co-authors 1
Tian Zhang
Wuhan University of Technology, PR China Shaoxing Institute for Advanced Research
Career Start Year 2006
Number of shared co-authors 1
Elton P Hudson
KTH - Royal Institute of Technology
Career Start Year 2005
Number of shared co-authors 1
Hal S Alper
The University of Texas at Austin
Career Start Year 2004
Number of shared co-authors 2
Ryan S Senger
Virginia Tech
Career Start Year 2003
Number of shared co-authors 1
Qiang He
University of Tennessee
Career Start Year 2001
Number of shared co-authors 11
Romy Chakraborty
Lawrence Berkeley National Laboratory
Career Start Year 2001
Number of shared co-authors 15
Yong-Su Jin
Department of Food Science and Nutrition, University of Illinois at Urbana-Champaign
Career Start Year 2000
Number of shared co-authors 2
Christopher L Hemme
University of Rhode Island
Career Start Year 1998
Number of shared co-authors 9
Kristala L J Prather
Massachusetts Institute of Technology
Career Start Year 1998
Number of shared co-authors 4
Craig Daniels
The Hospital for Sick Children
Career Start Year 1997
Number of shared co-authors 2
Matthew W Fields
Center for Biofilm Engineering (CBE), Montana State University
Career Start Year 1997
Number of shared co-authors 14
Daniele Fabbri
University of Bologna
Career Start Year 1996
Number of shared co-authors 0
Zamin K Yang
Oak Ridge National Laboratory
Career Start Year 1996
Number of shared co-authors 9
John E Hallsworth
Institute for Global Food Security, Queen's University Belfast
Career Start Year 1995
Number of shared co-authors 0
Vincent J J Martin
Concordia University
Career Start Year 1995
Number of shared co-authors 7
Uyen Huynh
University of Houston
Career Start Year 1994
Number of shared co-authors 0
Lutz Fischer
University of Hohenheim, Institute of Food Science and Biotechnology
Career Start Year 1993
Number of shared co-authors 0
Royston Goodacre
Institute of Systems, University of Liverpool
Career Start Year 1990
Number of shared co-authors 2
Brian H Davison
Oak Ridge National Laboratory (ORNL)
Career Start Year 1985
Number of shared co-authors 8
Lee R Lynd
Center for Bioenergy Innovation, Oak Ridge National Laboratory, Dartmouth College
Career Start Year 1982
Number of shared co-authors 9
Hans P Blaschek
University of Illinois at Urbana-Champaign
Career Start Year 1981
Number of shared co-authors 0
Gregory Stephanopoulos
Massachusetts Institute of Technology
Career Start Year 1979
Number of shared co-authors 1

Collaborators

Steven W Singer
Co-authored papers 52
Paul D Adams
Lawrence Berkeley National Laboratory
Co-authored papers 45
Terry C Hazen
University of Tennessee
Co-authored papers 17
Jay D Keasling
University of California berkeley
Co-authored papers 16
Aindrila Mukhopadhyay
Joint BioEnergy Institute
Co-authored papers 15
Trent R Northen
Co-authored papers 14
Christopher J Petzold
Joint BioEnergy Institute
Co-authored papers 14
Patrik D'haeseleer
Lawrence Livermore National Laboratory
Co-authored papers 13
Kristen M DeAngelis
University of Massachusetts
Co-authored papers 12
Edward E K Baidoo
Joint BioEnergy Institute
Co-authored papers 12
Deepti Tanjore
Lawrence Berkeley National Laboratory
Co-authored papers 11
Anup K Singh
Joint BioEnergy Institute, USA Lawrence Livermore National Laboratory
Co-authored papers 10
Manfred Auer
Southeast University
Co-authored papers 9
Anna Lipzen
Co-authored papers 8
Yu-Wei Wu
Co-authored papers 8
Benjamin P Bowen
Co-authored papers 5
Adam P Arkin
Lawrence Berkeley National Laboratory
Co-authored papers 5
Morgann C Reilly
Co-authored papers 4
Dylan Chivian
Lawrence Berkeley National Laboratory
Co-authored papers 4
Brian G Fox
University of Wisconsin-Madison
Co-authored papers 4
Jane I Khudyakov
University of the Pacific
Co-authored papers 4
Konstantinos Mavromatis
Celgene Corporation
Co-authored papers 4
Nathan J Hillson
Lawrence Berkeley National Laboratory
Co-authored papers 4
Karen W Davenport
Los Alamos National Laboratory
Co-authored papers 4
Asaf Salamov
US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 3
Nikos C Kyrpides
Co-authored papers 3
Hector Garcia Martin
Lawrence Berkeley National Laboratory
Co-authored papers 3
Vasanth R Singan
US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory
Co-authored papers 3
Tanveer S Batth
Novo Nordisk Foundation Center for Protein Research, University of Copenhagen
Co-authored papers 3
Peter I Benke
Life Sciences Institute, National University of Singapore
Co-authored papers 3
Release 1.2