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Author Details

Jon Ison
Institut Francais de Bioinformatique, CNRS
1999
26
13
Mohammad Sadnan Al Manir (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
34804501Perspectives on automated composition of workflows in the life sciences.F1000Res2021
33720735APE in the Wild: Automated Exploration of Proteomics Workflows in the bio.tools Registry.J Proteome Res2021
33506265biotoolsSchema: a formalized schema for bioinformatics software description.Gigascience2021
34804501Perspectives on automated composition of workflows in the life sciences.F1000Res2021
33506265biotoolsSchema: a formalized schema for bioinformatics software description.Gigascience2021
33720735APE in the Wild: Automated Exploration of Proteomics Workflows in the bio.tools Registry.J Proteome Res2021
31624831Community curation of bioinformatics software and data resources.Brief Bioinform2020
31913853JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools.J Integr Bioinform2020
31624831Community curation of bioinformatics software and data resources.Brief Bioinform2020
31913853JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools.J Integr Bioinform2020
31429284One Thousand and One Software for Proteomics: Tales of the Toolmakers of Science.J Proteome Res2019
30060113Automated workflow composition in mass spectrometry-based proteomics.Bioinformatics2019
31405382The bio.tools registry of software tools and data resources for the life sciences.Genome Biol2019
31429284One Thousand and One Software for Proteomics: Tales of the Toolmakers of Science.J Proteome Res2019
30060113Automated workflow composition in mass spectrometry-based proteomics.Bioinformatics2019
31405382The bio.tools registry of software tools and data resources for the life sciences.Genome Biol2019
28662064Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data.PLoS Biol2017
28751965Four simple recommendations to encourage best practices in research software.F1000Res2017
28662064Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data.PLoS Biol2017
28402416ReGaTE: Registration of Galaxy Tools in Elixir.Gigascience2017
29333231Using bio.tools to generate and annotate workbench tool descriptions.F1000Res2017
28402416ReGaTE: Registration of Galaxy Tools in Elixir.Gigascience2017
29333231Using bio.tools to generate and annotate workbench tool descriptions.F1000Res2017
28751965Four simple recommendations to encourage best practices in research software.F1000Res2017
26538599Tools and data services registry: a community effort to document bioinformatics resources.Nucleic Acids Res2016
26538599Tools and data services registry: a community effort to document bioinformatics resources.Nucleic Acids Res2016
25068035The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation.J Biomed Semantics2014
25068035The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation.J Biomed Semantics2014
23193272ArrayExpress update--trends in database growth and links to data analysis tools.Nucleic Acids Res2013
23193272ArrayExpress update--trends in database growth and links to data analysis tools.Nucleic Acids Res2013
23479348EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats.Bioinformatics2013
23479348EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats.Bioinformatics2013
20462862The EMBRACE web service collection.Nucleic Acids Res2010
20823319BioXSD: the common data-exchange format for everyday bioinformatics web services.Bioinformatics2010
20462862The EMBRACE web service collection.Nucleic Acids Res2010
20823319BioXSD: the common data-exchange format for everyday bioinformatics web services.Bioinformatics2010
15608116Automatic generation and evaluation of sparse protein signatures for families of protein structural domains.Protein Sci2005
15608116Automatic generation and evaluation of sparse protein signatures for families of protein structural domains.Protein Sci2005
16128614ROCPLOT: a generic software tool for ROC analysis and the validation of predictive methods.Appl Bioinformatics2005
16247798Survey of the geometric association of domain-domain interfaces.Proteins2005
16128614ROCPLOT: a generic software tool for ROC analysis and the validation of predictive methods.Appl Bioinformatics2005
16247798Survey of the geometric association of domain-domain interfaces.Proteins2005
11465034Information resources for the bioinformatician.Brief Bioinform2000
11465041Exploring protein domain structure.Brief Bioinform2000
11465034Information resources for the bioinformatician.Brief Bioinform2000
10842345Key residues approach to the definition of protein families and analysis of sparse family signatures.Proteins2000
10838571The bioinformatics resourceTrends Biochem Sci2000
10842345Key residues approach to the definition of protein families and analysis of sparse family signatures.Proteins2000
10838571The bioinformatics resourceTrends Biochem Sci2000
11465041Exploring protein domain structure.Brief Bioinform2000
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Collaborators

University of Bergen
Co-authored papers 9
University of Southern Denmark
Co-authored papers 9
Institut Francais de Bioinformatique
Co-authored papers 7
Technical University of Denmark
Co-authored papers 6
Center for Proteomics and Metabolomics, Leiden University Medical Center
Co-authored papers 5
Institute of Computer Science, University of Potsdam
Co-authored papers 4
European Bioinformatics Institute
Co-authored papers 4
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
European Bioinformatics Institute
Co-authored papers 4
Institute of Computer Science, University of Tartu
Co-authored papers 3
University of Manchester
Co-authored papers 3
Rostock University Medical Center
Co-authored papers 2
The University of Manchester
Co-authored papers 2
Co-authored papers 2
European Bioinformatics Institute
Co-authored papers 2
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 2
The University of Manchester
Co-authored papers 2
Co-authored papers 2
Oxford e-Research Centre, University of Oxford
Co-authored papers 2
University of Manchester
Co-authored papers 2
The University of Manchester
Co-authored papers 2
Spanish National Bioinformatics Institute (INB/ELIXIR-ES)
Co-authored papers 2
Novo Nordisk Foundation Center for Protein Research, University of Copenhagen
Co-authored papers 2
Vrije Universiteit Amsterdam (VU)
Co-authored papers 2
Inc. 137 Montague Street
Co-authored papers 2
Leiden Institute of Advanced Computer Science, Leiden University
Co-authored papers 2
University of Rome 'Tor Vergata'
Co-authored papers 1
University of Melbourne, The University of Melbourne
Co-authored papers 1
Halicioglu Data Science Institute, University of California San Diego
Co-authored papers 1
Co-authored papers 1