Author details

Full Name

Mark A Musen

Affiliation

Stanford Center for Biomedical Informatics Research, Stanford University

ORCID

Career Start Year

1987

Papers

230

H Index

Expertise

CM4AI Collaborator

Timothy Clark (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36759942	The scalable precision medicine open knowledge engine (SPOKE): a massive knowledge graph of biomedical information.	Bioinformatics	2023
36973309	Specimen, biological structure, and spatial ontologies in support of a Human Reference Atlas.	Sci Data	2023
36759942	The scalable precision medicine open knowledge engine (SPOKE): a massive knowledge graph of biomedical information.	Bioinformatics	2023
36973309	Specimen, biological structure, and spatial ontologies in support of a Human Reference Atlas.	Sci Data	2023
36093122	A biomedical open knowledge network harnesses the power of AI to understand deep human biology.	AI Mag	2022
36371407	Modeling community standards for metadata as templates makes data FAIR.	Sci Data	2022
36093122	A biomedical open knowledge network harnesses the power of AI to understand deep human biology.	AI Mag	2022
36064801	Without appropriate metadata, data-sharing mandates are pointless.	Nature	2022
36371407	Modeling community standards for metadata as templates makes data FAIR.	Sci Data	2022
36064801	Without appropriate metadata, data-sharing mandates are pointless.	Nature	2022
33479214	An empirical meta-analysis of the life sciences linked open data on the web.	Sci Data	2021
33479214	An empirical meta-analysis of the life sciences linked open data on the web.	Sci Data	2021
34151988	Using ethnographic methods to classify the human experience in medicine: a case study of the presence ontology.	J Am Med Inform Assoc	2021
34514430	Design of a FAIR digital data health infrastructure in Africa for COVID-19 reporting and research.	Adv Genet (Hoboken)	2021
34514430	Design of a FAIR digital data health infrastructure in Africa for COVID-19 reporting and research.	Adv Genet (Hoboken)	2021
34151988	Using ethnographic methods to classify the human experience in medicine: a case study of the presence ontology.	J Am Med Inform Assoc	2021
32477627	Physician Usage and Acceptance of a Machine Learning Recommender System for Simulated Clinical Order Entry.	AMIA Jt Summits Transl Sci Proc	2020
32477627	Physician Usage and Acceptance of a Machine Learning Recommender System for Simulated Clinical Order Entry.	AMIA Jt Summits Transl Sci Proc	2020
32570683	Toward a Harmonized WHO Family of International Classifications Content Model.	Stud Health Technol Inform	2020
33339830	Obstacles to the reuse of study metadata in ClinicalTrials.gov.	Sci Data	2020
33106874	OrderRex clinical user testing: a randomized trial of recommender system decision support on simulated cases.	J Am Med Inform Assoc	2020
33339830	Obstacles to the reuse of study metadata in ClinicalTrials.gov.	Sci Data	2020
33106874	OrderRex clinical user testing: a randomized trial of recommender system decision support on simulated cases.	J Am Med Inform Assoc	2020
32570683	Toward a Harmonized WHO Family of International Classifications Content Model.	Stud Health Technol Inform	2020
30778255	The variable quality of metadata about biological samples used in biomedical experiments.	Sci Data	2019
31210270	Using association rule mining and ontologies to generate metadata recommendations from multiple biomedical databases.	Database (Oxford)	2019
30778255	The variable quality of metadata about biological samples used in biomedical experiments.	Sci Data	2019
31531395	Enabling Web-scale data integration in biomedicine through Linked Open Data.	NPJ Digit Med	2019
31531395	Enabling Web-scale data integration in biomedicine through Linked Open Data.	NPJ Digit Med	2019
31210270	Using association rule mining and ontologies to generate metadata recommendations from multiple biomedical databases.	Database (Oxford)	2019
29657560	Analyzing user interactions with biomedical ontologies: A visual perspective.	Web Semant	2018
30166985	The CAIRR Pipeline for Submitting Standards-Compliant B and T Cell Receptor Repertoire Sequencing Studies to the National Center for Biotechnology Information Repositories.	Front Immunol	2018
30012108	CEDAR OnDemand: a browser extension to generate ontology-based scientific metadata.	BMC Bioinformatics	2018
29854196	Fast and Accurate Metadata Authoring Using Ontology-Based Recommendations.	AMIA Annu Symp Proc	2018
29854169	Mechanism-based Pharmacovigilance over the Life Sciences Linked Open Data Cloud.	AMIA Annu Symp Proc	2018
29572502	Interpretation of biological experiments changes with evolution of the Gene Ontology and its annotations.	Sci Rep	2018
29657560	Analyzing user interactions with biomedical ontologies: A visual perspective.	Web Semant	2018
30815087	How Sustainable are Biomedical Ontologies?	AMIA Annu Symp Proc	2018
29854196	Fast and Accurate Metadata Authoring Using Ontology-Based Recommendations.	AMIA Annu Symp Proc	2018
29854169	Mechanism-based Pharmacovigilance over the Life Sciences Linked Open Data Cloud.	AMIA Annu Symp Proc	2018
30012108	CEDAR OnDemand: a browser extension to generate ontology-based scientific metadata.	BMC Bioinformatics	2018
30166985	The CAIRR Pipeline for Submitting Standards-Compliant B and T Cell Receptor Repertoire Sequencing Studies to the National Center for Biotechnology Information Repositories.	Front Immunol	2018
30815087	How Sustainable are Biomedical Ontologies?	AMIA Annu Symp Proc	2018
29572502	Interpretation of biological experiments changes with evolution of the Gene Ontology and its annotations.	Sci Rep	2018
28815153	High-Risk Drug-Drug Interactions Between Clinical Practice Guidelines for Management of Chronic Conditions.	AMIA Jt Summits Transl Sci Proc	2017
32219223	The CEDAR Workbench: An Ontology-Assisted Environment for Authoring Metadata that Describe Scientific Experiments.	Semant Web ISWC	2017
28819351	A Systematic Analysis of Term Reuse and Term Overlap across Biomedical Ontologies.	Semant Web	2017
28815153	High-Risk Drug-Drug Interactions Between Clinical Practice Guidelines for Management of Chronic Conditions.	AMIA Jt Summits Transl Sci Proc	2017
28764813	An ontology-driven tool for structured data acquisition using Web forms.	J Biomed Semantics	2017
28592275	NCBO Ontology Recommender 2.0: an enhanced approach for biomedical ontology recommendation.	J Biomed Semantics	2017

1 - 50 of 460

Kavishwar B Wagholikar

Massachusetts General Hospital

Career Start Year 2009

Number of shared co-authors 11

Vipul Kashyap

ICAR-National Dairy Research Institute

Career Start Year 2003

Number of shared co-authors 7

Philip R O Payne

Institute for Informatics, Washington University School of Medicine in St. Louis

Career Start Year 2003

Number of shared co-authors 17

Alan Ruttenberg

University at Buffalo

Career Start Year 2003

Number of shared co-authors 19

Chunhua Weng

Columbia University Irving Medical Center

Career Start Year 2002

Number of shared co-authors 25

Guoqian Jiang

Mayo Clinic Rochester Minnesota USA.

Career Start Year 2002

Number of shared co-authors 13

Javed Mostafa

University of North Carolina at Chapel Hill

Career Start Year 2001

Number of shared co-authors 1

Michael Hogarth

university of california san diego

Career Start Year 2000

Number of shared co-authors 4

Parsa Mirhaji

Albert Einstein College of Medicine and Montefiore Medical Center

Career Start Year 1999

Number of shared co-authors 3

Alex A T Bui

University of California Los Angeles

Career Start Year 1998

Number of shared co-authors 3

John F Hurdle

University of Utah

Career Start Year 1996

Number of shared co-authors 0

Qing Zeng-Treitler

The First Affiliated Hospital, Hengyang Medical School, University of South China

Career Start Year 1996

Number of shared co-authors 10

Aziz A Boxwala

Elimu Informatics Inc.

Career Start Year 1994

Number of shared co-authors 8

Steven H Brown

Vanderbilt University Medical Center

Career Start Year 1994

Number of shared co-authors 10

Eneida A Mendonca

Cincinnati Children's Hospital Medical Center and University of Cincinnati

Career Start Year 1994

Number of shared co-authors 6

Gai Elhanan

NV Center for Genomic Medicine, Desert Research Institute

Career Start Year 1993

Number of shared co-authors 7

Olivier Bodenreider

National Institutes of Health

Career Start Year 1993

Number of shared co-authors 19

Martin Boeker

Institute of AI and Informatics in Medicine, Technical University of Munich

Career Start Year 1992

Number of shared co-authors 8

Robert H Dolin

Elimu Informatics Inc.

Career Start Year 1992

Number of shared co-authors 5

Robert A Jenders

Charles Drew University & University of California los angeles

Career Start Year 1992

Number of shared co-authors 7

Stephen B Johnson

New York University Grossman School of Medicine

Career Start Year 1991

Number of shared co-authors 15

Dario A Giuse

Vanderbilt University Medical Center

Career Start Year 1991

Number of shared co-authors 4

Alexa T McCray

Columbia University in the City of New York.

Career Start Year 1990

Number of shared co-authors 17

William R Hogan

College of Medicine, University of Florida

Career Start Year 1990

Number of shared co-authors 11

Prakash M Nadkarni

College of Nursing, University of Iowa Hospitals and Clinics

Career Start Year 1988

Number of shared co-authors 4

Peter Szolovits

Massachusetts Institute of Technology

Career Start Year 1986

Number of shared co-authors 9

Perry L Miller

Clinical Epidemiology Research Center (CERC), VA Connecticut Healthcare System

Career Start Year 1983

Number of shared co-authors 17

Justin Starren

Northwestern University Feinberg School of Medicine

Career Start Year 1981

Number of shared co-authors 16

Peter J Haug

Intermountain Healthcare & University of Utah

Career Start Year 1981

Number of shared co-authors 19

Ronald Cornet

University of Amsterdam

Career Start Year 1975

Number of shared co-authors 8

row(s) 1 - 30 of 30

Samson W Tu

Stanford University

Co-authored papers 49

Natalya F Noy

Stanford Center for Biomedical Informatics Research, Stanford University

Co-authored papers 29

Nigam H Shah

Stanford University

Co-authored papers 21

Daniel L Rubin

Stanford University.

Co-authored papers 20

Tania Tudorache

Stanford University

Co-authored papers 20

Mary K Goldstein

Stanford University

Co-authored papers 18

Csongor Nyulas

Stanford University

Co-authored papers 17

Ravi Shankar

Stanford University School of Medicine

Co-authored papers 11

David L Buckeridge

McGill University

Co-authored papers 10

Edward H Shortliffe

Vagelos College of Physicians and Surgeons, Columbia University

Co-authored papers 8

John Graybeal

Stanford University

Co-authored papers 8

John H Gennari

University of Washington

Co-authored papers 8

Clement Jonquet

University of Montpellier, CNRS

Co-authored papers 8

Johan van der Lei

Erasmus Medical Center

Co-authored papers 7

Christopher G Chute

Brown University, Brown University Warren Alpert Medical School, Dartmouth-Hitchcock Medical Center, Harvard School of Public Health, Johns Hopkins Medicine, Mayo Clinic Minnesota

Co-authored papers 6

James R Campbell

University of Nebraska Medical Center

Co-authored papers 5

James Geller

New Jersey Institute of Technology

Co-authored papers 5

Russ B Altman

Stanford University

Co-authored papers 5

Kaustubh Supekar

Stanford University School of Medicine, California Wu Tsai Neurosciences Institute