Author details

Full Name

Mark M Davis

Affiliation

ORCID

Career Start Year

1976

Papers

448

H Index

142

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
36658110	Cytotoxic CD8<sup>+</sup> T cells target citrullinated antigens in rheumatoid arthritis.	Nat Commun	2023
37918220	Corrigendum to "Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: results from the IMPACC study" [eBioMedicine 83 (2022) 104208].	EBioMedicine	2023
37707792	Acute Respiratory Illness Is Associated with Memory T Cell Differentiation and Other Immune Cell Changes in an Age-Associated Manner.		2023
37156915	Hypoimmune induced pluripotent stem cells survive long term in fully immunocompetent, allogeneic rhesus macaques.		2023
36717665	A TLR7-nanoparticle adjuvant promotes a broad immune response against heterologous strains of influenza and SARS-CoV-2.	Nat Mater	2023
37339051	A structural blueprint for interleukin-21 signal modulation.		2023
37205380	Organoid modeling of lung-resident immune responses to SARS-CoV-2 infection.	Res Sq	2023
36947821	Systems Immunology: Origins.		2023
37001518	Entropic analysis of antigen-specific CDR3 domains identifies essential binding motifs shared by CDR3s with different antigen specificities.	Cell Syst	2023
37000856	NK-like CD8 Î³Î´ T cells are expanded in persistent infection.		2023
36996809	Spheromers reveal robust TÂ cell responses to the Pfizer/BioNTech vaccine and attenuated peripheral CD8<sup>+</sup> TÂ cell responses post SARS-CoV-2 infection.	Immunity	2023
37292866	Disrupted memory T cell expansion in HIV-exposed uninfected infants is preceded by premature skewing of T cell receptor clonality.	bioRxiv	2023
37225997	Addendum: Systems vaccinology of the BNT162b2 mRNA vaccine in humans.	Nature	2023
37500727	Integrated single-cell chromatin and transcriptomic analyses of human scalp identify gene-regulatory programs and critical cell types for hair and skin diseases.	Nat Genet	2023
34702715	Single-cell sequencing unveils distinct immune microenvironments with CCR6-CCL20 crosstalk in human chronic pancreatitis.	Gut	2022
35762356	Identification of Pathogenic Immune Cell Subsets Associated With Checkpoint Inhibitor-Induced Myocarditis.	Circulation	2022
36220826	Evolution and modulation of antigen-specific T cell responses in melanoma patients.	Nature Communications	2022
36087209	Grouping T-Cell Antigen Receptors by Specificity.	Methods in Molecular Biology	2022
36087206	A High-Throughput Strategy for T-Cell Receptor Cloning and Expression.	Methods in Molecular Biology	2022
36087198	Characterization of KIRCD8 Regulatory T Cells in Humans by scRNA- and TCR-seq.	Methods in Molecular Biology	2022
35690068	Multiomic analysis reveals cell-type-specific molecular determinants of COVID-19 severity.	Cell Syst	2022
35430876	Human Coronary Plaque T Cells Are Clonal and Cross-React to Virus and Self.	Circ Res	2022
36253002	Localized ablative immunotherapy drives de novo CD8<sup>+</sup> T-cell responses to poorly immunogenic tumors.	J Immunother Cancer	2022
36114291	Author Correction: Hypoimmunogenic derivatives of induced pluripotent stem cells evade immune rejection in fully immunocompetent allogeneic recipients.	Nature Biotechnology	2022
36516854	Engineered cell entry links receptor biology with single-cell genomics.	Cell	2022
34514750	Effective viral vector response to SARS-CoV-2 booster vaccination in a patient with rheumatoid arthritis after initial ineffective response to messenger RNA vaccine.	Arthritis and Rheumatology	2022
35258337	KIR<sup>+</sup>CD8<sup>+</sup> T cells suppress pathogenic T cells and are active in autoimmune diseases and COVID-19.	Science	2022
35040666	Early non-neutralizing, afucosylated antibody responses are associated with COVID-19 severity.	Sci Transl Med	2022
35025672	Antibodies elicited by SARS-CoV-2 infection or mRNA vaccines have reduced neutralizing activity against Beta and Omicron pseudoviruses.	Sci Transl Med	2022
34964311	Treatment With Simvastatin and Rifaximin Restores the Plasma Metabolomic Profile in Patients With Decompensated Cirrhosis.	Hepatology Communications	2022
35148837	Immune imprinting, breadth of variant recognition, and germinal center response in human SARS-CoV-2 infection and vaccination.	Cell	2022
34489601	Integrated analysis of plasma and single immune cells uncovers metabolic changes in individuals with COVID-19.	Nat Biotechnol	2022
34648304	CD4<sup>+</sup> T cells contribute to neurodegeneration in Lewy body dementia.	Science	2021
34021082	Nanoparticle-enabled innate immune stimulation activates endogenous tumor-infiltrating T cells with broad antigen specificities.	Proceedings of the National Academy of Sciences of the United States of America	2021
33811141	Signatures of immune dysfunction in HIV and HCV infection share features with chronic inflammation in aging and persist after viral reduction or elimination.	Proc Natl Acad Sci U S A	2021
34174187	The single-cell epigenomic and transcriptional landscape of immunity to influenza vaccination.	Cell	2021
33748696	Learning from HIV-1 to predict the immunogenicity of TÂ cell epitopes in SARS-CoV-2.	iScience	2021
33691136	Global analysis of shared TÂ cell specificities in human non-small cell lung cancer enables HLA inference and antigen discovery.	Immunity	2021
34065617	Systems Immunology: Revealing Influenza Immunological Imprint.	Viruses	2021
33851181	mRNA vaccination compared to infection elicits an IgG-predominant response with greater SARS-CoV-2 specificity and similar decrease in variant spike recognition.	medRxiv	2021
34108657	Single-cell epigenomic landscape of peripheral immune cells reveals establishment of trained immunity in individuals convalescing from COVID-19.	Nature Cell Biology	2021
34214472	Humans with inherited TÂ cell CD28 deficiency are susceptible to skin papillomaviruses but are otherwise healthy.	Cell	2021
33461563	Aging and CMV discordance are associated with increased immune diversity between monozygotic twins.	Immunity and Ageing	2021
34210785	CD8 T cells specific for conserved coronavirus epitopes correlate with milder disease in COVID-19 patients.	Science immunology	2021
33511368	SIMON: Open-Source Knowledge Discovery Platform.	Patterns (N Y)	2021
34252919	Systems vaccinology of the BNT162b2 mRNA vaccine in humans.	Nature	2021
34189540	Common and rare variant analyses combined with single-cell multiomics reveal cell-type-specific molecular mechanisms of COVID-19 severity.	medRxiv	2021
32776859	Immune Checkpoint Inhibitor Cardiotoxicity: Understanding Basic Mechanisms and Clinical Characteristics and Finding a Cure.	Annual Review of Pharmacology and Toxicology	2021
33406011	Antigen-Specific T-Cell Activation Distinguishes between Recent and Remote Tuberculosis Infection.	American Journal of Respiratory and Critical Care Medicine	2021
33432170	Modeling human adaptive immune responses with tonsil organoids.	Nature Medicine	2021