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Author Details

Youri Hoogstrate
Erasmus MC Cancer Institute
2014
29
15
PMIDPaper TitleJournal TitlePublished Year
36898379Transcriptome analysis reveals tumor microenvironment changes in glioblastoma.Cancer Cell2023
38024241Longitudinal characteristics of T2-FLAIR mismatch in IDH-mutant astrocytomas: Relation to grade, histopathology, and overall survival in the GLASS-NL cohort.Neurooncol Adv2023
34608482The EGFRvIII transcriptome in glioblastoma: A meta-omics analysis.Neuro Oncol2022
37848617Katdetectr: an R/bioconductor package utilizing unsupervised changepoint analysis for robust kataegis detection.Gigascience2022
35396392CRISPRs in the human genome are differentially expressed between malignant and normal adjacent to tumor tissue.Commun Biol2022
35275197Temozolomide and Radiotherapy versus Radiotherapy Alone in Patients with Glioblastoma, IDH-wildtype: Post Hoc Analysis of the EORTC Randomized Phase III CATNON Trial.Clin Cancer Res2022
34595478Generation, characterization, and drug sensitivities of 12 patient-derived IDH1-mutant glioma cell cultures.Neurooncol Adv2021
33740099Non-IDH1-R132H IDH1/2 mutations are associated with increased DNA methylation and improved survival in astrocytomas, compared to IDH1-R132H mutations.Acta Neuropathol2021
33704479You spin me right 'round.Neuro Oncol2021
33914057Prognostic significance of genome-wide DNA methylation profiles within the randomized, phase 3, EORTC CATNON trial on non-1p/19q deleted anaplastic glioma.Neuro Oncol2021
34891161Fusion transcripts and their genomic breakpoints in polyadenylated and ribosomal RNA-minus RNA sequencing data.Gigascience2021
35047820Landscape of driver gene events, biomarkers, and druggable targets identified by whole-genome sequencing of glioblastomas.Neurooncol Adv2021
34724897FASTAFS: file system virtualisation of random access compressed FASTA files.BMC Bioinformatics2021
31411736Molecular characterization of colorectal adenomas reveals POFUT1 as a candidate driver of tumor progression.Int J Cancer2020
32764569Cellular, mitochondrial and molecular alterations associate with early left ventricular diastolic dysfunction in a porcine model of diabetic metabolic derangement.Sci Rep2020
32596446Guide-free Cas9 from pathogenic <i>Campylobacter jejuni</i> bacteria causes severe damage to DNA.Sci Adv2020
30735634Widespread and Functional RNA Circularization in Localized Prostate Cancer.Cell2019
32642719EGFR mutations are associated with response to depatux-m in combination with temozolomide and result in a receptor that is hypersensitive to ligand.Neurooncol Adv2019
29953864Community-Driven Data Analysis Training for Biology.Cell Syst2018
29968252Consensus molecular subtype classification of colorectal adenomas.J Pathol2018
28582575The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy.Nucleic Acids Res2017
29123641Systematically linking tranSMART, Galaxy and EGA for reusing human translational research data.F1000Res2017
26762204Identification of Patients with Recurrent Glioblastoma Who May Benefit from Combined Bevacizumab and CCNU Therapy: A Report from the BELOB Trial.Cancer Res2016
28232859Integration of EGA secure data access into Galaxy.F1000Res2016
26656567FuMa: reporting overlap in RNA-seq detected fusion genes.Bioinformatics2016
27015120A comprehensive repertoire of tRNA-derived fragments in prostate cancer.Oncotarget2016
25338717FlaiMapper: computational annotation of small ncRNA-derived fragments using RNA-seq high-throughput data.Bioinformatics2015
26041889C/D-box snoRNA-derived RNA production is associated with malignant transformation and metastatic progression in prostate cancer.Oncotarget2015
25374662iReport: a generalised Galaxy solution for integrated experimental reporting.Gigascience2014
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Collaborators

Erasmus University Medical Center
Co-authored papers 13
Erasmus MC Cancer Institute
Co-authored papers 12
Erasmus MC Cancer Institute, University Medical Center Rotterdam
Co-authored papers 7
The Netherlands Cancer Institute
Co-authored papers 7
The Netherlands Cancer Institute
Co-authored papers 5
Netherlands Cancer Institute
Co-authored papers 5
Department of Immunology Erasmus University Medical Center
Co-authored papers 5
University Hospital and University of Zurich
Co-authored papers 4
Swammerdam Institute for Life Sciences, University of Amsterdam
Co-authored papers 4
Erasmus MC Cancer Institute
Co-authored papers 4
Co-authored papers 4
Universitat Pompeu Fabra
Co-authored papers 3
Moffit Cancer Center
Co-authored papers 3
National Cancer Institute
Co-authored papers 3
Princess Margaret Cancer Centre
Co-authored papers 3
Co-authored papers 3
Foundation Lygature
Co-authored papers 2
Fondazione IRCCS Istituto Neurologico Carlo Besta
Co-authored papers 2
Universitat Pompeu Fabra
Co-authored papers 2
Prostate Cancer Research Center, Tampere University and Tays Cancer Center
Co-authored papers 2
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European Bioinformatics Institute
Co-authored papers 2
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 2
VU University Amsterdam
Co-authored papers 2
The Pennsylvania State University, University Park
Co-authored papers 1
Ontario Institute for Cancer Research
Co-authored papers 1
Max Planck Institute of Immunobiology and Epigenetics
Co-authored papers 1
Ontario Institute for Cancer Research
Co-authored papers 1
People's Hospital of Henan University, Henan Provincial People's Hospital
Co-authored papers 1