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Author Details

Janne Lehti??
Karolinska Institutet
1997
164
46
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
36495079Glioblastoma stem cells express non-canonical proteins and exclusive mesenchymal-like or non-mesenchymal-like protein signatures.Mol Oncol2023
37591242FBXL12 degrades FANCD2 to regulate replication recovery and promote cancer cell survival under conditions of replication stress.Mol Cell2023
37739942Comprehensive proteomics and meta-analysis of COVID-19 host response.Nat Commun2023
38039364Harnessing T cell exhaustion and trogocytosis to isolate patient-derived tumor-specific TCR.Sci Adv2023
37641393Precision cancer medicine: Concepts, current practice, and future developments.J Intern Med2023
37923723Development of mesothelioma-specific oncolytic immunotherapy enabled by immunopeptidomics of murine and human mesothelioma tumors.Nat Commun2023
36964195Prediction model for drug response of acute myeloid leukemia patients.NPJ Precis Oncol2023
36572751Proteogenomic analysis of acute myeloid leukemia associates relapsed disease with reprogrammed energy metabolism both in adults and children.Leukemia2023
36266272Proteogenomics refines the molecular classification of chronic lymphocytic leukemia.Nat Commun2022
35732783SubCellBarCode: integrated workflow for robust spatial proteomics by mass spectrometry.Nat Protoc2022
35354797Integrative multi-omics and drug response profiling of childhood acute lymphoblastic leukemia cell lines.Nat Commun2022
36923555Proteome Analysis of Pancreatic Tumors Implicates Extracellular Matrix in Patient Outcome.Cancer Res Commun2022
34066041Correcting for Naturally Occurring Mass Isotopologue Abundances in Stable-Isotope Tracing Experiments with PolyMID.Metabolites2021
33625756The transcriptome-wide landscape of molecular subtype-specific mRNA expression profiles in acute myeloid leukemia.Am J Hematol2021
34870237Proteogenomics of non-small cell lung cancer reveals molecular subtypes associated with specific therapeutic targets and immune evasion mechanisms.Nat Cancer2021
34737229Reprogrammed transsulfuration promotes basal-like breast tumor progression via realigning cellular cysteine persulfidation.Proc Natl Acad Sci U S A2021
34549195Subcellular proteomics.Nat Rev Methods Primers2021
34605646PeptiCHIP: A Microfluidic Platform for Tumor Antigen Landscape Identification.ACS Nano2021
34298622Therapeutic Cancer Vaccination with Immunopeptidomics-Discovered Antigens Confers Protective Antitumor Efficacy.Cancers (Basel)2021
32457125In-depth plasma proteomics reveals increase in circulating PD-1 during anti-PD-1 immunotherapy in patients with metastatic cutaneous melanoma.J Immunother Cancer2020
32051232Cell Cycle Profiling Reveals Protein Oscillation, Phosphorylation, and Localization Dynamics.Mol Cell Proteomics2020
31893970PCSK6 Is a Key Protease in the Control of Smooth Muscle Cell Function in Vascular Remodeling.Circ Res2020
33322045Novel Broad-Spectrum Antiviral Inhibitors Targeting Host Factors Essential for Replication of Pathogenic RNA Viruses.Viruses2020
32628111PTEN and DNA-PK determine sensitivity and recovery in response to WEE1 inhibition in human breast cancer.Elife2020
32994316Mutation-independent Proteomic Signatures of Pathological Progression in Murine Models of Duchenne Muscular Dystrophy.Mol Cell Proteomics2020
32847508Combined transcriptome and proteome profiling of the pancreatic β-cell response to palmitate unveils key pathways of β-cell lipotoxicity.BMC Genomics2020
32645560Ex vivo assessment of targeted therapies in a rare metastatic epithelial-myoepithelial carcinoma.Neoplasia2020
32117720Immunometabolic Network Interactions of the Kynurenine Pathway in Cutaneous Malignant Melanoma.Front Oncol2020
32205417DEqMS: A Method for Accurate Variance Estimation in Differential Protein Expression Analysis.Mol Cell Proteomics2020
30609389SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization.Mol Cell2019
31670074MYCN-enhanced Oxidative and Glycolytic Metabolism Reveals Vulnerabilities for Targeting Neuroblastoma.iScience2019
31712735Early symptoms and sensations as predictors of lung cancer: a machine learning multivariate model.Sci Rep2019
31849937TcellSubC: An Atlas of the Subcellular Proteome of Human T Cells.Front Immunol2019
31611586Author Correction: Extracellular nanovesicles released from the commensal yeast Malassezia sympodialis are enriched in allergens and interact with cells in human skin.Sci Rep2019
31489782Voluntary exercise normalizes the proteomic landscape in muscle and brain and improves the phenotype of progeroid mice.Aging Cell2019
31601645A Mitochondrial LYR Protein Is Required for Complex I Assembly.Plant Physiol2019
31199885Ouabain-regulated phosphoproteome reveals molecular mechanisms for Na<sup>+</sup>, K<sup>+</sup>-ATPase control of cell adhesion, proliferation, and survival.FASEB J2019
30777133Two subgroups in systemic lupus erythematosus with features of antiphospholipid or Sjögren's syndrome differ in molecular signatures and treatment perspectives.Arthritis Res Ther2019
30944321Proteogenomics and Hi-C reveal transcriptional dysregulation in high hyperdiploid childhood acute lymphoblastic leukemia.Nat Commun2019
31171813Systematic assessment of antibody selectivity in plasma based on a resource of enrichment profiles.Sci Rep2019
30962452Breast cancer quantitative proteome and proteogenomic landscape.Nat Commun2019
31133680The viral protein corona directs viral pathogenesis and amyloid aggregation.Nat Commun2019
30958262In-depth human plasma proteome analysis captures tissue proteins and transfer of protein variants across the placenta.Elife2019
30679164Ultrasensitive Immunoprofiling of Plasma Extracellular Vesicles Identifies Syndecan-1 as a Potential Tool for Minimally Invasive Diagnosis of Glioma.Clin Cancer Res2019
29323256Splicing of platelet resident pre-mRNAs upon activation by physiological stimuli results in functionally relevant proteome modifications.Sci Rep2018
30242930Accumulation of endogenous peptides triggers a pathogen stress response in Arabidopsis thaliana.Plant J2018
30154400Metabolic reprogramming of acute lymphoblastic leukemia cells in response to glucocorticoid treatment.Cell Death Dis2018
30018314Heterogeneity and interplay of the extracellular vesicle small RNA transcriptome and proteome.Sci Rep2018
29907748Extracellular nanovesicles released from the commensal yeast Malassezia sympodialis are enriched in allergens and interact with cells in human skin.Sci Rep2018
30175270Novel Multiomics Profiling of Human Carotid Atherosclerotic Plaques and Plasma Reveals Biliverdin Reductase B as a Marker of Intraplaque Hemorrhage.JACC Basic Transl Sci2018
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Collaborators

Henrik J Johansson
Karolinska Institutet
Co-authored papers 41
Yudi Pawitan
Karolinska Institute
Co-authored papers 10
Barbro Linderholm
Sahlgrenska University Hospital
Co-authored papers 5
Joakim Lundeberg
KTH Royal Institute of Technology
Co-authored papers 4
Mikael Huss
Stockholm University
Co-authored papers 4
Peter Nilsson
Linkoping University
Co-authored papers 4
Thomas Helleday
The University of Sheffield
Co-authored papers 4
Jochen M Schwenk
KTH Royal Institute of Technology
Co-authored papers 4
Mathias Uhl??n
KTH Royal Institute of Technology
Co-authored papers 4
Per-Ake Nygren
Royal Institute of Technology
Co-authored papers 3
Jacob Odeberg
The Arctic University of Norway
Co-authored papers 3
Olli Kallioniemi
Karolinska Institute
Co-authored papers 3
Henrik Wern??rus
AlbaNova University Center, Royal Institute of Technology
Co-authored papers 3
Jesper Tegn??r
King Abdullah University of Science and Technology (KAUST)
Co-authored papers 3
Steve E Humphries
Co-authored papers 2
Elena Tremoli
Co-authored papers 2
Angelika Schmidt
Institute for Immunology, Biomedical Center (BMC)
Co-authored papers 2
Tove Bostr??m
Albanova University Center , KTH-Royal Institute of Technology
Co-authored papers 2
Thomas Quertermous
Co-authored papers 2
Ann-Sofie Jemth
Karolinska Institutet
Co-authored papers 2
Sophia Hober
KTH Royal Institute of Technology
Co-authored papers 2
Simon Anders
Heidelberg University
Co-authored papers 2
Andrey Alexeyenko
Karolinska Institutet
Co-authored papers 2
Filip Mundt
Co-authored papers 2
Timothy J Griffin
University of Minnesota
Co-authored papers 2
P??l Stenmark
Stockholm University
Co-authored papers 2
Clint L Miller
University of Virginia
Co-authored papers 2
Ronnie P-A Berntsson
Umea University
Co-authored papers 2
Anders Hamsten
Co-authored papers 2
Hjalmar Brismar
Royal Institute of Technology, Karolinska Institutet
Co-authored papers 2
Release 1.2