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Author Details

Keith D James
Wellcome Trust Sanger Institute
1992
31
28
PMIDPaper TitleJournal TitlePublished Year
25572316Inter-individual variability contrasts with regional homogeneity in the human brain DNA methylome.Nucleic Acids Res2015
25572316Inter-individual variability contrasts with regional homogeneity in the human brain DNA methylome.Nucleic Acids Res2015
23190111ChIP-seq and transcriptome analysis of the OmpR regulon of Salmonella enterica serovars Typhi and Typhimurium reveals accessory genes implicated in host colonization.Mol Microbiol2013
23190111ChIP-seq and transcriptome analysis of the OmpR regulon of Salmonella enterica serovars Typhi and Typhimurium reveals accessory genes implicated in host colonization.Mol Microbiol2013
20081834FRT-seq: amplification-free, strand-specific transcriptome sequencing.Nat Methods2010
20808788Complex exon-intron marking by histone modifications is not determined solely by nucleosome distribution.PLoS One2010
20885785Orphan CpG islands identify numerous conserved promoters in the mammalian genome.PLoS Genet2010
20393567CpG islands influence chromatin structure via the CpG-binding protein Cfp1.Nature2010
20081834FRT-seq: amplification-free, strand-specific transcriptome sequencing.Nat Methods2010
20188665Neuronal MeCP2 is expressed at near histone-octamer levels and globally alters the chromatin state.Mol Cell2010
20808788Complex exon-intron marking by histone modifications is not determined solely by nucleosome distribution.PLoS One2010
20885785Orphan CpG islands identify numerous conserved promoters in the mammalian genome.PLoS Genet2010
20188665Neuronal MeCP2 is expressed at near histone-octamer levels and globally alters the chromatin state.Mol Cell2010
20393567CpG islands influence chromatin structure via the CpG-binding protein Cfp1.Nature2010
19609351A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi.PLoS Genet2009
19609351A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi.PLoS Genet2009
18689808BioJava: an open-source framework for bioinformatics.Bioinformatics2008
18689808BioJava: an open-source framework for bioinformatics.Bioinformatics2008
17567990The landscape of histone modifications across 1% of the human genome in five human cell lines.Genome Res2007
17567990The landscape of histone modifications across 1% of the human genome in five human cell lines.Genome Res2007
17571346Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.Nature2007
17571346Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.Nature2007
15637271A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.Science2005
15875012The genome of the social amoeba Dictyostelium discoideum.Nature2005
15637271A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.Science2005
16221759Binding sites for metabolic disease related transcription factors inferred at base pair resolution by chromatin immunoprecipitation and genomic microarrays.Hum Mol Genet2005
16221759Binding sites for metabolic disease related transcription factors inferred at base pair resolution by chromatin immunoprecipitation and genomic microarrays.Hum Mol Genet2005
15875012The genome of the social amoeba Dictyostelium discoideum.Nature2005
15213324Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance.Proc Natl Acad Sci U S A2004
15213324Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance.Proc Natl Acad Sci U S A2004
14602910The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.Nucleic Acids Res2003
14602910The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.Nucleic Acids Res2003
12910271Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.Nat Genet2003
12936967Molecular analysis of incHI1 antimicrobial resistance plasmids from Salmonella serovar Typhi strains associated with typhoid fever.Antimicrob Agents Chemother2003
12936967Molecular analysis of incHI1 antimicrobial resistance plasmids from Salmonella serovar Typhi strains associated with typhoid fever.Antimicrob Agents Chemother2003
12910271Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.Nat Genet2003
12000953Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).Nature2002
12151231Characterisation and distribution of a cryptic Salmonella typhi plasmid pHCM2.Plasmid2002
12368864Genome sequence of the human malaria parasite Plasmodium falciparum.Nature2002
12368867Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13.Nature2002
12000953Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).Nature2002
12151231Characterisation and distribution of a cryptic Salmonella typhi plasmid pHCM2.Plasmid2002
12368864Genome sequence of the human malaria parasite Plasmodium falciparum.Nature2002
12368867Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13.Nature2002
11586360Genome sequence of Yersinia pestis, the causative agent of plague.Nature2001
11826475The decaying genome of Mycobacterium leprae.Lepr Rev2001
11586360Genome sequence of Yersinia pestis, the causative agent of plague.Nature2001
11677608Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18.Nature2001
11274119Yersinia pestis pFra shows biovar-specific differences and recent common ancestry with a Salmonella enterica serovar Typhi plasmid.J Bacteriol2001
11234002Massive gene decay in the leprosy bacillus.Nature2001
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Collaborators

Wellcome Trust Sanger Institute
Co-authored papers 13
University of Cambridge
Co-authored papers 10
Co-authored papers 9
Co-authored papers 5
Co-authored papers 5
Co-authored papers 4
King Abdullah University of Science and Technology
Co-authored papers 4
Co-authored papers 4
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
Earlham Institute
Co-authored papers 4
Edinburgh Clinical Research Facility, University of Edinburgh
Co-authored papers 4
Co-authored papers 4
Wellcome Sanger Institute
Co-authored papers 4
Co-authored papers 3
4Wellcome Trust Sanger Institute
Co-authored papers 3
Co-authored papers 3
Co-authored papers 3
Co-authored papers 3
Co-authored papers 3
Co-authored papers 2
Baylor College of Medicine
Co-authored papers 2
The Genome Center at Washington University, Washington University School of Medicine
Co-authored papers 2
Center for Genomics and Systems Biology
Co-authored papers 2
Co-authored papers 2
Co-authored papers 2
Co-authored papers 2
Malawi-Liverpool-Wellcome Trust Clinical Research Program
Co-authored papers 2
Co-authored papers 2
Weatherall Institute of Molecular Medicine
Co-authored papers 2
University of Massachusetts Medical School
Co-authored papers 2