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Author Details

Adam B Olshen
12224University of California san francisco
1993
129
53
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37907387Effect of a Home-based Walking Intervention on Cardiopulmonary Fitness and Quality of Life Among Men with Prostate Cancer on Active Surveillance: The Active Surveillance Exercise Randomized Controlled Trial.Eur Urol Oncol2024
36115520Perturbations in Neuroinflammatory Pathways Are Associated With a Worst Pain Profile in Oncology Patients Receiving Chemotherapy.J Pain2023
37292835Multiomic Single Cell Sequencing Identifies Stemlike Nature of Mixed Phenotype Acute Leukemia and Provides Novel Risk Stratification.bioRxiv2023
36945384Torch-eCpG: A fast and scalable eQTM mapper for thousands of molecular phenotypes with graphical processing units.bioRxiv2023
37039882Prediction of morning fatigue severity in outpatients receiving chemotherapy: less may still be more.Support Care Cancer2023
36857322Therapeutic implications of transcriptomics in head and neck cancer patient-derived xenografts.PLoS One2023
36470166Sleep disturbance is associated with perturbations in immune-inflammatory pathways in oncology outpatients undergoing chemotherapy.Sleep Med2023
36829114Does multi-way, long-range chromatin contact data advance 3D genome reconstruction?BMC Bioinformatics2023
36929768Epigenetic Regulation of Inflammatory Mechanisms and a Psychological Symptom Cluster in Patients Receiving Chemotherapy.Nurs Res2023
36700399Venetoclax and dinaciclib elicit synergistic preclinical efficacy against hypodiploid acute lymphoblastic leukemia.Haematologica2023
36373573Perturbations in common and distinct inflammatory pathways associated with morning and evening fatigue in outpatients receiving chemotherapy.Cancer Med2023
35929442Gastrointestinal Symptom Cluster is Associated With Epigenetic Regulation of Lymphotoxin Beta in Oncology Patients Receiving Chemotherapy.Biol Res Nurs2023
33375775Molecular and phenotypic diversity of CBL-mutated juvenile myelomonocytic leukemia.Haematologica2022
35654312Association between Ancestry-Specific 6q25 Variants and Breast Cancer Subtypes in Peruvian Women.Cancer Epidemiol Biomarkers Prev2022
35720970COVIDNearTerm: A simple method to forecast COVID-19 hospitalizations.J Clin Transl Sci2022
35262628Ferrous iron-activatable drug conjugate achieves potent MAPK blockade in KRAS-driven tumors.J Exp Med2022
34183765Exploring the genetic and epigenetic origins of juvenile myelomonocytic leukemia using newborn screening samples.Leukemia2022
33139265International Consensus Definition of DNA Methylation Subgroups in Juvenile Myelomonocytic Leukemia.Clin Cancer Res2021
33851706In utero and early-life exposure to thirdhand smoke causes profound changes to the immune system.Clin Sci (Lond)2021
33907275The role of HER2 and HER3 in HER2-amplified cancers beyond breast cancers.Sci Rep2021
34546978Caveolin-1 and Sox-2 are predictive biomarkers of cetuximab response in head and neck cancer.JCI Insight2021
34249477Prediction of evening fatigue severity in outpatients receiving chemotherapy: less may be more.Fatigue2021
32139107Next-Generation Sequencing of Retinoblastoma Identifies Pathogenic Alterations beyond RB1 Inactivation That Correlate with Aggressive Histopathologic Features.Ophthalmology2020
31687977Glucocorticoids paradoxically facilitate steroid resistance in T cell acute lymphoblastic leukemias and thymocytes.J Clin Invest2020
33272320Pan-cancer identification of clinically relevant genomic subtypes using outcome-weighted integrative clustering.Genome Med2020
32946981Human pediatric B-cell acute lymphoblastic leukemias can be classified as B-1 or B-2-like based on a minimal transcriptional signature.Exp Hematol2020
32681145Ribosome profiling reveals a functional role for autophagy in mRNA translational control.Commun Biol2020
32586194Differential methylation and expression of genes in the hypoxia-inducible factor 1 signaling pathway are associated with paclitaxel-induced peripheral neuropathy in breast cancer survivors and with preclinical models of chemotherapy-induced neuropathic pain.Mol Pain2020
30610465Magnetic resonance spectroscopy (MRS) can identify painful lumbar discs and may facilitate improved clinical outcomes of lumbar surgeries for discogenic pain.Eur Spine J2019
30701989A Pilot Study Using a Multistaged Integrated Analysis of Gene Expression and Methylation to Evaluate Mechanisms for Evening Fatigue in Women Who Received Chemotherapy for Breast Cancer.Biol Res Nurs2019
31024753Next-Generation Sequencing of Uveal Melanoma for Detection of Genetic Alterations Predicting Metastasis.Transl Vis Sci Technol2019
30657954Targeted Genomic Profiling of Acral Melanoma.J Natl Cancer Inst2019
30689221Identifying a potential biomarker for primary focal segmental glomerulosclerosis and its association with recurrence after transplantation.Clin Transplant2019
29296631Features of MRI stromal enhancement with neoadjuvant chemotherapy: a subgroup analysis of the ACRIN 6657/I-SPY TRIAL.J Med Imaging (Bellingham)2018
30172061Phenotypic Characterization of Paclitaxel-Induced Peripheral Neuropathy in Cancer Survivors.J Pain Symptom Manage2018
30426838Expression of mitochondrial dysfunction-related genes and pathways in paclitaxel-induced peripheral neuropathy in breast cancer survivors.Mol Pain2018
29528181Disease burden and conditioning regimens in ASCT1221, a randomized phase II trial in children with juvenile myelomonocytic leukemia: A Children's Oncology Group study.Pediatr Blood Cancer2018
29432308ABVD Without Radiation for Newly Diagnosed Pediatric and Young Adult Patients With Hodgkin Lymphoma: A Single Center Retrospective Analysis of 28 Consecutive Patients.J Pediatr Hematol Oncol2018
28559012Establishment and characterization of an oral tongue squamous cell carcinoma cell line from a never-smoking patient.Oral Oncol2017
28490572Heterogeneous resistance to quizartinib in acute myeloid leukemia revealed by single-cell analysis.Blood2017
29259179Genome-wide DNA methylation is predictive of outcome in juvenile myelomonocytic leukemia.Nat Commun2017
28916733Clonal expansion and epigenetic reprogramming following deletion or amplification of mutant <i>IDH1</i>.Proc Natl Acad Sci U S A2017
26903627Quantitative proteomic analyses of mammary organoids reveals distinct signatures after exposure to environmental chemicals.Proc Natl Acad Sci U S A2016
26619011Identifying recurrent mutations in cancer reveals widespread lineage diversity and mutational specificity.Nat Biotechnol2016
26711114Corrigendum: The genomic landscape of juvenile myelomonocytic leukemia.Nat Genet2016
26343386Exome sequencing of desmoplastic melanoma identifies recurrent NFKBIE promoter mutations and diverse activating mutations in the MAPK pathway.Nat Genet2015
26624623Development and Validation of a Gene-Based Model for Outcome Prediction in Germ Cell Tumors Using a Combined Genomic and Expression Profiling Approach.PLoS One2015
26457647The genomic landscape of juvenile myelomonocytic leukemia.Nat Genet2015
26373278DNA Methylation and Somatic Mutations Converge on the Cell Cycle and Define Similar Evolutionary Histories in Brain Tumors.Cancer Cell2015
24336570Mutational analysis reveals the origin and therapy-driven evolution of recurrent glioma.Science2014
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Collaborators

Ritu Roy
University of California San Francisco.
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Marc Ladanyi
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Co-authored papers 10
Agnes Viale
Memorial Sloan Kettering Cancer Center
Co-authored papers 9
Mignon L Loh
University of Washington
Co-authored papers 8
James E Korkola
Co-authored papers 8
Joseph F Costello
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Co-authored papers 8
Aaron Hechmer
University of California san francisco
Co-authored papers 7
Tali Mazor
Co-authored papers 7
Barry S Taylor
Memorial Sloan Kettering Cancer Center
Co-authored papers 6
Joe W Gray
Oregon Health and Science University
Co-authored papers 6
Victor E Reuter
Memorial Sloan Kettering Cancer Center
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Ronglai Shen
Co-authored papers 5
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University of California San Francisco
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Brett E Johnson
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Robert A Soslow
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Nikolaus Schultz
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Nicholas D Socci
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Larry Norton
Memorial Sloan Kettering Cancer Center
Co-authored papers 3
Chris Sander
Broad Institute of MIT and Harvard
Co-authored papers 3
Catherine C Park
University of California san francisco
Co-authored papers 3
Arie Perry
University of California san francisco
Co-authored papers 2
Patrick Brown
Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University
Co-authored papers 2
Davide Ruggero
University of California San Francisco
Co-authored papers 2
Heidi S Feiler
Co-authored papers 2
Joanna J Phillips
University of California san francisco
Co-authored papers 2
Paul T Spellman
Oregon Health & Science University Hospital.
Co-authored papers 2
Martin Hirst
University of British Columbia
Co-authored papers 2
Release 1.2