Author details

Full Name

Ginger A Metcalf

Affiliation

ORCID

Career Start Year

1966

Papers

H Index

Expertise

CM4AI Collaborator

PMID	Paper Title	Journal Title	Published Year
37163057	Identification of allele-specific KIV-2 repeats and impact on Lp(a) measurements for cardiovascular disease risk.	bioRxiv	2023
36444934	Whole-exome sequencing study identifies four novel gene loci associated with diabetic kidney disease.	Hum Mol Genet	2023
36778386	Structural variation across 138,134 samples in the TOPMed consortium.	Res Sq	2023
37398483	Functional Genomics of Gastrointestinal <i>Escherichia coli</i> Isolated from Patients with Cancer and Diarrhea.	bioRxiv	2023
36960714	Whole Genome Analysis of Venous Thromboembolism: the Trans-Omics for Precision Medicine Program.	Circ Genom Precis Med	2023
37333115	Longitudinal host transcriptional responses to SARS-CoV-2 infection in adults with extremely high viral load.	Res Sq	2023
37194601	Rare Genetic Variants Associated With Sudden Cardiac Arrest in the Young: A Prospective, Population-Based Study.	Circ Genom Precis Med	2023
36747810	Structural variation across 138,134 samples in the TOPMed consortium.	bioRxiv	2023
37292999	Longitudinal host transcriptional responses to SARS-CoV-2 infection in adults with extremely high viral load.	bioRxiv	2023
35346344	Whole-genome sequencing as an investigational device for return of hereditary disease risk and pharmacogenomic results as part of the All of Us Research Program.	Genome Med	2022
35385699	Polygenic transcriptome risk scores for COPD and lung function improve cross-ethnic portability of prediction in the NHLBI TOPMed program.	Am J Hum Genet	2022
35504290	TOP-LD: A tool to explore linkage disequilibrium with TOPMed whole-genome sequence data.	Am J Hum Genet	2022
36282588	Patient and Clinician Perceptions of Precision Cardiology Care: Findings From the HeartCare Study.	Circ Genom Precis Med	2022
35552711	Whole-exome sequencing of 14â¿¿389 individuals from the ESP and CHARGE consortia identifies novel rare variation associated with hemostatic factors.	Hum Mol Genet	2022
36644891	xAtlas: scalable small variant calling across heterogeneous next-generation sequencing experiments.	Gigascience	2022
36575487	Truvari: refined structural variant comparison preserves allelic diversity.	Genome Biol	2022
36481753	Whole genome sequencing identifies structural variants contributing to hematologic traits in the NHLBI TOPMed program.	Nat Commun	2022
35166336	Fully resolved assembly of Cryptosporidium parvum.	Gigascience	2022
34363016	Genetic testing in ambulatory cardiology clinics reveals high rate of findings with clinical management implications.	Genet Med	2021
33846614	Author Correction: High-depth African genomes inform human migration and health.	Nature	2021
33846329	Chromosome Xq23 is associated with lower atherogenic lipid concentrations and favorable cardiometabolic indices.	Nat Commun	2021
33769305	The Implementation Science for Genomic Health Translation (INSIGHT) Study in Epilepsy: Protocol for a Learning Health Care System.	JMIR Res Protoc	2021
33760063	muCNV: Genotyping Structural Variants for Population-level Sequencing.	Bioinformatics	2021
34432798	Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals.	PLoS One	2021
34593004	Transmission event of SARS-CoV-2 delta variant reveals multiple vaccine breakthrough infections.	BMC Med	2021
33057025	Whole genome sequence analysis of pulmonary function and COPD in 19,996 multi-ethnic participants.	Nat Commun	2020
31883642	Allelic Heterogeneity at the CRP Locus Identified by Whole-Genome Sequencing in Multi-ancestry Cohorts.	Am J Hum Genet	2020
32766579	Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals.	bioRxiv	2020
33330863	Oligonucleotide Capture Sequencing of the SARS-CoV-2 Genome and Subgenomic Fragments from COVID-19 Individuals.	bioRxiv	2020
31005411	Leveraging Human Microbiome Features to Diagnose and Stratify Children with Irritable Bowel Syndrome.	J Mol Diagn	2019
29329757	Challenges of Francisella classification exemplified by an atypical clinical isolate.	Diagn Microbiol Infect Dis	2018
30356187	Temporal development of the gut microbiome in early childhood from the TEDDY study.	Nature	2018
29610217	Sequence-Based Analysis of Lipid-Related Metabolites in a Multiethnic Study.	Genetics	2018
28089252	Practical Approaches for Whole-Genome Sequence Analysis of Heart- and Blood-Related Traits.	Am J Hum Genet	2017
28854705	Whole-genome sequencing study of serum peptide levels: the Atherosclerosis Risk in Communities study.	Hum Mol Genet	2017
29178920	The gut mycobiome of the Human Microbiome Project healthy cohort.	Microbiome	2017
28300864	Whole exome sequencing in the Framingham Heart Study identifies rare variation in HYAL2 that influences platelet aggregation.	Thromb Haemost	2017
27588453	Whole-Exome Sequencing Identifies Loci Associated with Blood Cell Traits and Reveals a Role for Alternative GFI1B Splice Variants in Human Hematopoiesis.	Am J Hum Genet	2016
27486782	Whole-Exome Sequencing Identifies Loci Associated with Blood Cell Traits and Reveals a Role for Alternative GFI1B Splice Variants in Human Hematopoiesis.	Am J Hum Genet	2016
26658788	Rare Exome Sequence Variants in CLCN6 Reduce Blood Pressure Levels and Hypertension Risk.	Circ Cardiovasc Genet	2016
27900368	Whole-exome sequencing reveals an inherited R566X mutation of the epithelial sodium channel Î²-subunit in a case of early-onset phenotype of Liddle syndrome.	Cold Spring Harb Mol Case Stud	2016
27602404	Loss-of-function variants influence the human serum metabolome.	Sci Adv	2016
27884205	Whole genome sequence analysis of serum amino acid levels.	Genome Biol	2016
26306392	Structure and function of the healthy pre-adolescent pediatric gut microbiome.	Microbiome	2015
25631608	Low-frequency and rare exome chip variants associate with fasting glucose and type 2 diabetes susceptibility.	Nat Commun	2015
25915599	Analysis of loss-of-function variants and 20 risk factor phenotypes in 8,554 individuals identifies loci influencing chronic disease.	Nat Genet	2015
26272574	High-Quality Draft Genome Sequence of Francisella tularensis subsp. holarctica Strain OR96-0246.	Genome Announc	2015
18948947	Somatic mutations affect key pathways in lung adenocarcinoma.	Nature	2008
6431323	Enhanced patient care by optimal utilization of rehabilitation resources: a goal for military health care.	Military Medicine	1984
6806699	Early intervention for high risk infants: an outline of regional physical therapy services.	Military Medicine	1982