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Author Details

Frank Dehne
Carleton University
2006
21
13
Nevan J Krogan (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37372372Peptides of a Feather: How Computation Is Taking Peptide Therapeutics under Its Wing.Genes (Basel)2023
36004308A computational approach to rapidly design peptides that detect SARS-CoV-2 surface protein S.NAR Genom Bioinform2022
34582199Human-Soybean Allergies: Elucidation of the Seed Proteome and Comprehensive Protein-Protein Interaction Prediction.J Proteome Res2021
31996697PIPE4: Fast PPI Predictor for Comprehensive Inter- and Cross-Species Interactomes.Sci Rep2020
30660105In Silico Engineering of Synthetic Binding Proteins from Random Amino Acid Sequences.iScience2019
30529711Insights into the suitability of utilizing brown rats (Rattus norvegicus) as a model for healing spinal cord injury with epidermal growth factor and fibroblast growth factor-II by predicting protein-protein interactions.Comput Biol Med2019
28987344Uncharacterized ORF HUR1 influences the efficiency of non-homologous end-joining repair in Saccharomyces cerevisiae.Gene2018
27832313Mapping and identification of a potential candidate gene for a novel maturity locus, E10, in soybean.Theor Appl Genet2017
28248977Evolution of protein-protein interaction networks in yeast.PLoS One2017
29112936Designing anti-Zika virus peptides derived from predicted human-Zika virus protein-protein interactions.Comput Biol Chem2017
25979473SpeeDB: fast structural protein searches.Bioinformatics2015
25492630Efficient prediction of human protein-protein interactions at a global scale.BMC Bioinformatics2014
22355752Short Co-occurring Polypeptide Regions Can Predict Global Protein Interaction Maps.Sci Rep2012
21635751Binding site prediction for protein-protein interactions and novel motif discovery using re-occurring polypeptide sequences.BMC Bioinformatics2011
22646215Recent advances in protein-protein interaction prediction: experimental and computational methods.Expert Opin Drug Discov2011
20870801Computational approaches toward the design of pools for the in vitro selection of complex aptamers.RNA2010
19754960Bridging the gap between systems biology and medicine.Genome Med2009
18202838Computational methods for predicting protein-protein interactions.Adv Biochem Eng Biotechnol2008
19204804SPR distance computation for unrooted trees.Evol Bioinform Online2008
18586826Global investigation of protein-protein interactions in yeast Saccharomyces cerevisiae using re-occurring short polypeptide sequences.Nucleic Acids Res2008
16872538PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs.BMC Bioinformatics2006
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Collaborators

Ashkan Golshani
Ottawa Institute of Systems Biology, Carleton University
Co-authored papers 18
Bahram Samanfar
Agriculture and Agri-Food Canada
Co-authored papers 11
Sylvain Pitre
Carleton University
Co-authored papers 11
Mohsen Hooshyar
Department of Biology and Ottawa Institute of Systems Biology, Carleton University
Co-authored papers 8
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University of Regina
Co-authored papers 6
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University of Regina
Co-authored papers 6
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Ottawa Institute of Systems Biology, University of Ottawa, Carleton University
Co-authored papers 5
Katayoun Omidi
Carleton University
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Institute of Data Science, Maastricht University
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Ganzhou Municipal Health Commission
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University of Regina
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Michael A Langston
University of Tennessee
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Taha Azad
Ottawa Hospital Research Institute
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Albert Chan
Co-authored papers 2
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University of Pittsburgh
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Jesper Tegn??r
King Abdullah University of Science and Technology (KAUST)
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KU Leuven - University of Leuven
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University of California San Francisco
Co-authored papers 1
Ke Jin
West China Hospital, Sichuan University
Co-authored papers 1
Andrew Emili
Boston University School of Medicine, Boston University
Co-authored papers 1
John C Bell
Ottawa Hospital Research Institute
Co-authored papers 1
Jack F Greenblatt
College Street, University of Toronto
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Jim Cheetham
Co-authored papers 1
Charles Auffray
European Institute for Systems Biology and Medicine
Co-authored papers 1
Bruce J Aronow
Cincinnati Children's Hospital Medical Center
Co-authored papers 1
Marinella Gebbia
University of Toronto
Co-authored papers 1
Alex Duong
Co-authored papers 1
David M Rocke
University of California davis
Co-authored papers 1
Hiroyuki Aoki
University of Regina
Co-authored papers 1
Release 1.2