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Author Details

Cecilia N Arighi
University of Delaware
1998
71
25
Gloria M Sheynkman (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37485423Enhancing biomedical search interfaces with images.Bioinform Adv2023
37485423Enhancing biomedical search interfaces with images.Bioinform Adv2023
36197453Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII.Database (Oxford)2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
36197453Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII.Database (Oxford)2022
35849818BioRED: a rich biomedical relation extraction dataset.Brief Bioinform2022
36699359Hagit Shatkay-Reshef 1965-2022.Bioinform Adv2022
35849818BioRED: a rich biomedical relation extraction dataset.Brief Bioinform2022
36699359Hagit Shatkay-Reshef 1965-2022.Bioinform Adv2022
35961013A roadmap for the functional annotation of protein families: a community perspective.Database (Oxford)2022
33147627Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.Brief Bioinform2021
34048547emiRIT: a text-mining-based resource for microRNA information.Database (Oxford)2021
34252939Utilizing image and caption information for biomedical document classification.Bioinformatics2021
33821964UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase.Bioinformatics2021
33147627Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.Brief Bioinform2021
34453518Corrigendum to: Utilizing image and caption information for biomedical document classification.Bioinformatics2021
33821964UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase.Bioinformatics2021
34453518Corrigendum to: Utilizing image and caption information for biomedical document classification.Bioinformatics2021
34252939Utilizing image and caption information for biomedical document classification.Bioinformatics2021
34048547emiRIT: a text-mining-based resource for microRNA information.Database (Oxford)2021
32367111UPCLASS: a deep learning-based classifier for UniProtKB entry publications.Database (Oxford)2020
32367111UPCLASS: a deep learning-based classifier for UniProtKB entry publications.Database (Oxford)2020
32395768RESTful API for iPTMnet: a resource for protein post-translational modification network discovery.Database (Oxford)2020
33046717Protein ontology on the semantic web for knowledge discovery.Sci Data2020
32504045An evolutionarily conserved motif is required for Plasmodesmata-located protein 5 to regulate cell-to-cell movement.Commun Biol2020
32716361A Coordinated Approach by Public Domain Bioinformatics Resources to Aid the Fight Against Alzheimer's Disease Through Expert Curation of Key Protein Targets.J Alzheimers Dis2020
33046717Protein ontology on the semantic web for knowledge discovery.Sci Data2020
32716361A Coordinated Approach by Public Domain Bioinformatics Resources to Aid the Fight Against Alzheimer's Disease Through Expert Curation of Key Protein Targets.J Alzheimers Dis2020
32504045An evolutionarily conserved motif is required for Plasmodesmata-located protein 5 to regulate cell-to-cell movement.Commun Biol2020
32395768RESTful API for iPTMnet: a resource for protein post-translational modification network discovery.Database (Oxford)2020
31032839An effective biomedical document classification scheme in support of biocuration: addressing class imbalance.Database (Oxford)2019
31032839An effective biomedical document classification scheme in support of biocuration: addressing class imbalance.Database (Oxford)2019
30805646PIRSitePredict for protein functional site prediction using position-specific rules.Database (Oxford)2019
30805646PIRSitePredict for protein functional site prediction using position-specific rules.Database (Oxford)2019
29145615iPTMnet: an integrated resource for protein post-translational modification network discovery.Nucleic Acids Res2018
30576489iTextMine: integrated text-mining system for large-scale knowledge extraction from the literature.Database (Oxford)2018
30382141Murine Oviductosomes (OVS) microRNA profiling during the estrous cycle: Delivery of OVS-borne microRNAs to sperm where miR-34c-5p localizes at the centrosome.Sci Rep2018
29695735Integrative annotation and knowledge discovery of kinase post-translational modifications and cancer-associated mutations through federated protein ontologies and resources.Sci Rep2018
29145615iPTMnet: an integrated resource for protein post-translational modification network discovery.Nucleic Acids Res2018
30576489iTextMine: integrated text-mining system for large-scale knowledge extraction from the literature.Database (Oxford)2018
30382141Murine Oviductosomes (OVS) microRNA profiling during the estrous cycle: Delivery of OVS-borne microRNAs to sperm where miR-34c-5p localizes at the centrosome.Sci Rep2018
29695735Integrative annotation and knowledge discovery of kinase post-translational modifications and cancer-associated mutations through federated protein ontologies and resources.Sci Rep2018
27899649Protein Ontology (PRO): enhancing and scaling up the representation of protein entities.Nucleic Acids Res2017
29036270On expert curation and scalability: UniProtKB/Swiss-Prot as a case study.Bioinformatics2017
29220476eGenPub, a text mining system for extending computationally mapped bibliography for UniProt Knowledgebase by capturing centrality.Database (Oxford)2017
27899649Protein Ontology (PRO): enhancing and scaling up the representation of protein entities.Nucleic Acids Res2017
28150246iPTMnet: Integrative Bioinformatics for Studying PTM Networks.Methods Mol Biol2017
28150240Analysis of Protein Phosphorylation and Its Functional Impact on Protein-Protein Interactions via Text Mining of the Scientific Literature.Methods Mol Biol2017
28150233Tutorial on Protein Ontology Resources.Methods Mol Biol2017
28150246iPTMnet: Integrative Bioinformatics for Studying PTM Networks.Methods Mol Biol2017
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Collaborators

Georgetown University Medical Center
Co-authored papers 42
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Co-authored papers 17
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National Center for Biotechnology Information, National Institutes of Health.
Co-authored papers 12
University at Buffalo
Co-authored papers 9
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The MITRE Corporation
Co-authored papers 8
Massachusetts Institute of Technology
Co-authored papers 8
NYU Grossman School of Medicine
Co-authored papers 8
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Co-authored papers 7
Spanish National Cancer Research Centre
Co-authored papers 7
Co-authored papers 7
Center for Bioinformatics and Computational Biology, University of Delaware
Co-authored papers 6
Institute for Research in Immunology and Cancer (IRIC), University of Montreal
Co-authored papers 6
University at Buffalo
Co-authored papers 5
University of Colorado Denver
Co-authored papers 5
California Institute of Technology
Co-authored papers 5
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
Qilu University of Technology (Shandong Academy of Sciences)
Co-authored papers 4
European Bioinformatics Institute (EMBL-EBI)
Co-authored papers 4
Josep Carreras Leukaemia Research Institute (IJC)
Co-authored papers 4
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 4
Duke University School of Medicine
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University of Delaware
Co-authored papers 4
National Center for Biotechnology Information, National Institutes of Health
Co-authored papers 4