Author details

Full Name

Barbara Panning

Affiliation

University of California san francisco

ORCID

Career Start Year

1989

Papers

H Index

Expertise

CM4AI Collaborator

Nevan J Krogan (CM4AI)

PMID	Paper Title	Journal Title	Published Year
36617879	X Chromosome Factor Kdm6a Enhances Cognition Independent of Its Demethylase Function in the Aging XY Male Brain.	J Gerontol A Biol Sci Med Sci	2023
32848093	A second X chromosome contributes to resilience in a mouse model of Alzheimer's disease.	Sci Transl Med	2020
30325306	OGT binds a conserved C-terminal domain of TET1 to regulate TET1 activity and function in development.	Elife	2018
26949256	SOX2 O-GlcNAcylation alters its protein-protein interactions and genomic occupancy to modulate gene expression in pluripotent cells.	Elife	2016
27738243	Autotaxin-mediated lipid signaling intersects with LIF and BMP signaling to promote the naive pluripotency transcription factor program.	Proc Natl Acad Sci U S A	2016
27223409	Activators and repressors: A balancing act for X-inactivation.	Semin Cell Dev Biol	2016
26051228	Editorial overview: Genome architecture and expression.	Curr Opin Genet Dev	2015
24456982	X-inactivation: Xist RNA uses chromosome contacts to coat the X.	Curr Biol	2014
25418180	Quantitatively imaging chromosomes by correlated cryo-fluorescence and soft x-ray tomographies.	Biophys J	2014
25307932	Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation.	Cell	2014
23407553	Quantitative genetic-interaction mapping in mammalian cells.	Nat Methods	2013
24154523	The imprinted polycomb group gene Sfmbt2 is required for trophoblast maintenance and placenta development.	Development	2013
22770243	Derivation conditions impact X-inactivation status in female human induced pluripotent stem cells.	Cell Stem Cell	2012
21606357	Polycomb repressive complex 2 is necessary for the normal site-specific O-GlcNAc distribution in mouse embryonic stem cells.	Proc Natl Acad Sci U S A	2011
20085734	Fine-tuning silencing.	Cell Stem Cell	2010
20800472	Control of embryonic stem cell identity by nucleosome remodeling enzymes.	Curr Opin Genet Dev	2010
20657585	The A-repeat links ASF/SF2-dependent Xist RNA processing with random choice during X inactivation.	Nat Struct Mol Biol	2010
20133344	High resolution electron transfer dissociation studies of unfractionated intact histones from murine embryonic stem cells using on-line capillary LC separation: determination of abundant histone isoforms and post-translational modifications.	Mol Cell Proteomics	2010
20176923	Condensin complexes regulate mitotic progression and interphase chromatin structure in embryonic stem cells.	J Cell Biol	2010
19386123	The zinc finger protein Zn72D and DEAD box helicase Belle interact and control maleless mRNA and protein levels.	BMC Mol Biol	2009
18364230	X-inactivation: it takes two to count.	Curr Biol	2008
18775322	Transcriptional regulation: it takes a village.	Mol Cell	2008
18832628	Epigenomics: a roadmap, but to where?	Science	2008
18948739	Chromatin regulation Tip(60)s the balance in embryonic stem cell self-renewal.	Cell Cycle	2008
18983701	X-chromosome inactivation: the molecular basis of silencing.	J Biol	2008
18493085	A thermodynamic switch for chromosome colocalization.	Genetics	2008
18643306	The colocalization transition of homologous chromosomes at meiosis.	Phys Rev E Stat Nonlin Soft Matter Phys	2008
18614019	An RNAi screen of chromatin proteins identifies Tip60-p400 as a regulator of embryonic stem cell identity.	Cell	2008
17406994	The polycomb group protein SUZ12 regulates histone H3 lysine 9 methylation and HP1 alpha distribution.	Chromosome Res	2007
17991856	IRE1 signaling affects cell fate during the unfolded protein response.	Science	2007
17954609	Differences between homologous alleles of olfactory receptor genes require the Polycomb Group protein Eed.	J Cell Biol	2007
17923683	Zinc finger protein Zn72D promotes productive splicing of the maleless transcript.	Mol Cell Biol	2007
17570398	The histone domain of macroH2A1 contains several dispersed elements that are each sufficient to direct enrichment on the inactive X chromosome.	J Mol Biol	2007
17333237	XIST RNA exhibits nuclear retention and exhibits reduced association with the export factor TAP/NXF1.	Chromosoma	2007
17322296	Poly(ADP-ribose) polymerase 1 is inhibited by a histone H2A variant, MacroH2A, and contributes to silencing of the inactive X chromosome.	J Biol Chem	2007
17350582	The site-specific installation of methyl-lysine analogs into recombinant histones.	Cell	2007
17350580	The XIST noncoding RNA functions independently of BRCA1 in X inactivation.	Cell	2007
16210244	Mapping post-translational modifications of the histone variant MacroH2A1 using tandem mass spectrometry.	Mol Cell Proteomics	2006
16415857	The Polycomb group protein Eed protects the inactive X-chromosome from differentiation-induced reactivation.	Nat Cell Biol	2006
16669701	X chromosomes alternate between two states prior to random X-inactivation.	PLoS Biol	2006
15797204	Recognition and modification of seX chromosomes.	Curr Opin Genet Dev	2005
16243022	Counting chromosomes: not as easy as 1, 2, 3.	Curr Biol	2005
16285873	Chromatin remodeling in dosage compensation.	Annu Rev Genet	2005
15897469	Stable X chromosome inactivation involves the PRC1 Polycomb complex and requires histone MACROH2A1 and the CULLIN3/SPOP ubiquitin E3 ligase.	Proc Natl Acad Sci U S A	2005
15881892	Chromatin modifications on the inactive X chromosome.	Prog Mol Subcell Biol	2005
15986205	Developmental regulation of Suz 12 localization.	Chromosoma	2005
14975322	X inactivation in mouse ES cells: histone modifications and FISH.	Methods Enzymol	2004
15596546	Developmentally regulated alterations in Polycomb repressive complex 1 proteins on the inactive X chromosome.	J Cell Biol	2004
12787769	Epigenetic gene regulation by noncoding RNAs.	Curr Opin Cell Biol	2003
12649488	Role of histone H3 lysine 27 methylation in X inactivation.	Science	2003

1 - 50 of 65

Greg Donahue

Penn Epigenetics Institute, Perelman School of Medicine, University of Pennsylvania

Career Start Year 2010

Number of shared co-authors 2

Joke G van Bemmel

Institut Curie, PSL Research University, CNRS UMR3215, INSERM U934

Career Start Year 2010

Number of shared co-authors 4

Andreas Rechtsteiner

University of California

Career Start Year 2004

Number of shared co-authors 1

Zachary D Smith

University of Maryland Baltimore County

Career Start Year 2004

Number of shared co-authors 1

Ulrich Braunschweig

University of Toronto

Career Start Year 2003

Number of shared co-authors 0

Rupa Sridharan

Wisconsin Institute for Discovery, University of Wisconsin-Madison

Career Start Year 2003

Number of shared co-authors 0

Yoichiro Shibata

Center for Genomic and Computational Biology, Duke University.

Career Start Year 2000

Number of shared co-authors 3

Duncan T Odom

Cancer Research UK Cambridge Institute, University of Cambridge

Career Start Year 1999

Number of shared co-authors 3

Maria-Elena Torres-Padilla

Institute of Epigenetics and Stem Cells (IES)

Career Start Year 1997

Number of shared co-authors 1

Jason D Lieb

The University of Chicago

Career Start Year 1996

Number of shared co-authors 3

Asifa Akhtar

Max Planck Institute of Immunobiology and Epigenetics

Career Start Year 1996

Number of shared co-authors 0

Miguel Ramalho-Santos

University of Toronto

Career Start Year 1996

Number of shared co-authors 4

Peter C Scacheri

Case Western Reserve University School of Medicine

Career Start Year 1995

Number of shared co-authors 2

Bing Ren

Center for Epigenomics, University of California San Diego

Career Start Year 1995

Number of shared co-authors 7

Oliver J Rando

University of Massachusetts Chan Medical School

Career Start Year 1994

Number of shared co-authors 3

Bradley E Bernstein

Broad Institute of MIT and Harvard

Career Start Year 1994

Number of shared co-authors 8

Ana Pombo

Polytechnic Institute of Leiria

Career Start Year 1994

Number of shared co-authors 1

Howard Y Chang

Center for Personal Dynamic Regulomes, Stanford University

Career Start Year 1992

Number of shared co-authors 14

Raffaella Santoro

University of Zurich

Career Start Year 1991

Number of shared co-authors 1

Ali Shilatifard

Northwestern University Feinberg School of Medicine

Career Start Year 1991

Number of shared co-authors 5

Valerio Orlando

King Abdullah University of Science and Technology (KAUST)

Career Start Year 1991

Number of shared co-authors 1

Bas van Steensel

Oncode Institute, Netherlands Cancer Institute

Career Start Year 1991

Number of shared co-authors 1

Edith Heard

Institut Curie, PSL Research University, CNRS UMR 5, INSERM U934

Career Start Year 1989

Number of shared co-authors 1

Shelley L Berger

Penn Epigenetics Institute, Perelman School of Medicine

Career Start Year 1985

Number of shared co-authors 8

Wolf Reik

The Babraham Institute

Career Start Year 1985

Number of shared co-authors 3

Richard R Meehan

Institute of Genetics and Molecular Medicine, University of Edinburgh

Career Start Year 1984

Number of shared co-authors 0

Danny Reinberg

HHMI/NYU Langone School of Medicine

Career Start Year 1980

Number of shared co-authors 1

Barbara J Wold

Merkin Institute for Translational Research, California Institute of Technology

Career Start Year 1976

Number of shared co-authors 3

Steven Henikoff

Fred Hutchinson Cancer Center

Career Start Year 1974

Number of shared co-authors 2

C David Allis

The Rockefeller University

Career Start Year 1974

Number of shared co-authors 7

row(s) 1 - 30 of 30

Thomas G Fazzio

Co-authored papers 5

Alma L Burlingame

Department of Pharmaceutical Chemistry, University of California san francisco

Co-authored papers 5

Feixia Chu

University of New Hampshire

Co-authored papers 3

Dale Talbot

University of California, Inc.

Co-authored papers 3

Kevan M Shokat

University of California San Francisco

Co-authored papers 2

Emily J Davis

University of California San Francisco

Co-authored papers 2

Geeta J Narlikar

University of California san francisco

Co-authored papers 2

Deepak Srivastava

Gladstone Institutes San Francisco

Co-authored papers 1

Max A Horlbeck

Broad Institute of MIT and Harvard

Co-authored papers 1

Sourav Bandyopadhyay

University of California San Francisco

Co-authored papers 1

Charles C White

University of Tennessee College of Medicine Chattanooga

Co-authored papers 1

Kevin Struhl

Co-authored papers 1

Nevan J Krogan (CM4AI)

University of California San Francisco

Co-authored papers 1

Luke A Gilbert

Arc Institute

Co-authored papers 1

Lennart Mucke

Gladstone Institute of Neurological Disease, Gladstone Institutes

Co-authored papers 1

David A Bennett

Rush University Medical Center

Co-authored papers 1

Chuan He

Institute of Hematology, West China Hospital of Sichuan University

Co-authored papers 1

Thomas Ried

Center for Cancer Research, National Cancer Institute

Co-authored papers 1

Joseph R Nery

The Salk Institute for Biological Studies

Co-authored papers 1

Bruce R Conklin

Gladstone Institutes

Co-authored papers 1

Joseph R Ecker

The Salk Institute for Biological Studies

Co-authored papers 1

Peter Walter

University of California san francisco

Co-authored papers 1

David A Maltby

The University of Sydney

Co-authored papers 1

Nino Devidze

Gladstone Institute of Neurological Disease

Co-authored papers 1

Gerry McDermott

University of California San Francisco

Co-authored papers 1

Gian Luca Negri

British Columbia Cancer Research Institute

Co-authored papers 1

Jacqueline E Villalta

University of California san francisco

Co-authored papers 1

Assen Roguev

University of California, USA Quantitative Biosciences Institute (QBI) san francisco

Co-authored papers 1

Michael C Bassik

Stanford University Medical Center

Co-authored papers 1

Nilanjana Chatterjee

Chittaranjan National Cancer Institute

Co-authored papers 1

1 - 30

Author Details

Column Actions

Recommended Authors

Collaborators