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Author Details

Yassene Mohammed
Center for Proteomics and Metabolomics, Leiden University Medical Center
2003
83
18
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
38048423Proteomic Evolution from Acute to Post-COVID-19 Conditions.J Proteome Res2024
36781801Absolute Quantitative Targeted Proteomics Assays for Plasma Proteins.Methods Mol Biol2023
37642399Cellular Validation of a Chemically Improved Inhibitor Identifies Monoubiquitination on OTUB2.ACS Chem Biol2023
37968313Fatty acid desaturation and lipoxygenase pathways support trained immunity.Nat Commun2023
37357756Inhibition of DHCR24 activates LXRα to ameliorate hepatic steatosis and inflammation.EMBO Mol Med2023
36781806Bioinformatics Tools and Knowledgebases to Assist Generating Targeted Assays for Plasma Proteomics.Methods Mol Biol2023
34986318Clostridioides difficile Phosphoproteomics Shows an Expansion of Phosphorylated Proteins in Stationary Growth Phase.mSphere2022
35607951Renin-Angiotensin System Pathway Therapeutics Associated With Improved Outcomes in Males Hospitalized With COVID-19.Crit Care Med2022
35931319Early Prediction of COVID-19 Patient Survival by Targeted Plasma Multi-Omics and Machine Learning.Mol Cell Proteomics2022
36355113Congruence and Complementarity of Differential Mobility Spectrometry and NMR Spectroscopy for Plasma Lipidomics.Metabolites2022
35164409Evaluation of Fast and Sensitive Proteome Profiling of FF and FFPE Kidney Patient Tissues.Molecules2022
34919779Targeted proteomics for evaluating risk of venous thrombosis following traumatic lower-leg injury or knee arthroscopy.J Thromb Haemost2022
35143212Longitudinal Plasma Proteomics Analysis Reveals Novel Candidate Biomarkers in Acute COVID-19.J Proteome Res2022
34050187Proteotyping of knockout mouse strains reveals sex- and strain-specific signatures in blood plasma.NPJ Syst Biol Appl2021
33683131An Update on MRMAssayDB: A Comprehensive Resource for Targeted Proteomics Assays in the Community.J Proteome Res2021
33483739Mouse Quantitative Proteomics Knowledgebase: reference protein concentration ranges in 20 mouse tissues using 5000 quantitative proteomics assays.Bioinformatics2021
34859676Cross-Laboratory Standardization of Preclinical Lipidomics Using Differential Mobility Spectrometry and Multiple Reaction Monitoring.Anal Chem2021
34585690A multiplexed, automated immuno-matrix assisted laser desorption/ionization mass spectrometry assay for simultaneous and precise quantitation of PTEN and p110α in cell lines and tumor tissues.Analyst2021
34680183Reinspection of a Clinical Proteomics Tumor Analysis Consortium (CPTAC) Dataset with Cloud Computing Reveals Abundant Post-Translational Modifications and Protein Sequence Variants.Cancers (Basel)2021
34270269Performance Assessment of a 125 Human Plasma Peptide Mixture Stored at Room Temperature for Multiple Reaction Monitoring-Mass Spectrometry.J Proteome Res2021
34065225Oxonium Ion Guided Analysis of Quantitative Proteomics Data Reveals Site-Specific <i>O</i>-Glycosylation of Anterior Gradient Protein 2 (AGR2).Int J Mol Sci2021
31552639Using the Object-Oriented PowerShell for Simple Proteomics Data Analysis.Methods Mol Biol2020
31808596The intestinal microbiome potentially affects thrombin generation in human subjects.J Thromb Haemost2020
32051233Improving Identification of In-organello Protein-Protein Interactions Using an Affinity-enrichable, Isotopically Coded, and Mass Spectrometry-cleavable Chemical Crosslinker.Mol Cell Proteomics2020
31896676Concentration Determination of &gt;200 Proteins in Dried Blood Spots for Biomarker Discovery and Validation.Mol Cell Proteomics2020
31911241Characterization of Macrophage Galactose-type Lectin (MGL) ligands in colorectal cancer cell lines.Biochim Biophys Acta Gen Subj2020
33004661Correction: Concentration Determination of &gt;200 Proteins in Dried Blood Spots for Biomarker Discovery and Validation.Mol Cell Proteomics2020
32886488Site-Specific Glycosylation Mapping of Fc Gamma Receptor IIIb from Neutrophils of Individual Healthy Donors.Anal Chem2020
32898301Serum N-Glycome analysis reveals pancreatic cancer disease signatures.Cancer Med2020
32643306Systematic Optimization of the iMALDI Workflow for the Robust and Straightforward Quantification of Signaling Proteins in Cancer Cells.Proteomics Clin Appl2020
32752259<i>N</i>-Glycoproteins Have a Major Role in MGL Binding to Colorectal Cancer Cell Lines: Associations with Overall Proteome Diversity.Int J Mol Sci2020
32350084Immunopeptidome Analysis of HLA-DPB1 Allelic Variants Reveals New Functional Hierarchies.J Immunol2020
32135565Plasma Protein Signatures of a Murine Venous Thrombosis Model and Slc44a2 Knockout Mice Using Quantitative-Targeted Proteomics.Thromb Haemost2020
32255452Determination of the concentration range for 267 proteins from 21 lots of commercial human plasma using highly multiplexed multiple reaction monitoring mass spectrometry.Analyst2020
30582698Glycoproteomic Analysis of MGL-Binding Proteins on Acute T-Cell Leukemia Cells.J Proteome Res2019
31548397Inhibition of ο24-dehydrocholesterol reductase activates pro-resolving lipid mediator biosynthesis and inflammation resolution.Proc Natl Acad Sci U S A2019
28011752Visualizing and comparing results of different peptide identification methods.Brief Bioinform2018
30192601Elliptic Flow of Charm and Strange Hadrons in High-Multiplicity p+Pb Collisions at sqrt[s_{NN}]=8.16â¿¿â¿¿TeV.Phys Rev Lett2018
30047222Visualization and application of amino acid retention coefficients obtained from modeling of peptide retention.J Sep Sci2018
30271959Molecular phenotyping of laboratory mouse strains using 500 multiple reaction monitoring mass spectrometry plasma assays.Commun Biol2018
30339440Observation of the Zâ¿¿Ï¿â¿¿^{+}â¿¿^{-} Decay in pp Collisions at sqrt[s]=13â¿¿â¿¿TeV.Phys Rev Lett2018
30339442Search for Pair-Produced Resonances Each Decaying into at Least Four Quarks in Proton-Proton Collisions at sqrt[s]=13â¿¿â¿¿TeV.Phys Rev Lett2018
29694107Measurement of the Splitting Function in pp and Pb-Pb Collisions at sqrt[s_{NN}]=5.02â¿¿â¿¿TeV.Phys Rev Lett2018
29542998Observation of Electroweak Production of Same-Sign W Boson Pairs in the Two Jet and Two Same-Sign Lepton Final State in Proton-Proton Collisions at sqrt[s]=13â¿¿â¿¿TeV.Phys Rev Lett2018
29762640MRMAssayDB: an integrated resource for validated targeted proteomics assays.Bioinformatics2018
28895300ExSTA: External Standard Addition Method for Accurate High-Throughput Quantitation in Targeted Proteomics Experiments.Proteomics Clin Appl2018
27538354Multiplexed panel of precisely quantified salivary proteins for biomarker assessment.Proteomics2017
28388204Observation of Charge-Dependent Azimuthal Correlations in p-Pb Collisions and Its Implication for the Search for the Chiral Magnetic Effect.Phys Rev Lett2017
29053305Search for Charged Higgs Bosons Produced via Vector Boson Fusion and Decaying into a Pair of W and Z Bosons Using pp Collisions at sqrt[s]=13â¿¿â¿¿TeV.Phys Rev Lett2017
29296750Multiplexed targeted proteomic assay to assess coagulation factor concentrations and thrombosis-associated cancer.Blood Adv2017
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Collaborators

Christoph H Borchers
McGill University
Co-authored papers 30
Malvika Sharan
The Alan Turing Institute
Co-authored papers 15
Bonghee Hong
South China Agricultural University
Co-authored papers 15
Wendy Funk
Kennell and Associates Inc.
Co-authored papers 15
Elodie M Da Costa
Departement de pharmacologie et physiologie, Universite de Montreal
Co-authored papers 15
Fan Zhang
Institute of High Energy Physics (IHEP), Chinese Academy of Sciences
Co-authored papers 15
M G??rski
University of Regensburg
Co-authored papers 15
Nadia Odell
Northwestern University
Co-authored papers 15
Hyunwoo Kim
Korea University
Co-authored papers 14
Jay Bowen
Nationwide Children's Hospital
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Najaf Amin
Co-authored papers 10
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Christopher Hartl
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Ming Shi
Center for Correlated Matter and School of Physics, Zhejiang University
Co-authored papers 8
Uzma Hussain
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Erika Berry
Brown University
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Brian Schneider
Institut fur Kern- und Teilchenphysik, Technische Universitat Dresden
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Southern California Eye Institute, CHA Hollywood Presbyterian Medical Center
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David R Goodlett
University of Victoria
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James A Russell
St. Paul's Hospital, University of British Columbia
Co-authored papers 3
John C Marshall
St. Michael's Hospital
Co-authored papers 3
Srinivas Murthy
University of British Columbia
Co-authored papers 2
Keith R Walley
University of British Columbia
Co-authored papers 2
Derek Smith
Co-authored papers 2
Angela M Jackson
Co-authored papers 2
John H Boyd
University of British Columbia
Co-authored papers 2
Ekaterina Mostovenko
Virginia Commonwealth University
Co-authored papers 2
Fran??ois Lamontagne
Universite de Sherbrooke
Co-authored papers 2
Frits R Rosendaal
Co-authored papers 2
Robert A Fowler
Institute of Health Policy
Co-authored papers 2
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