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Author Details

Jette Bornholdt
University of Copenhagen
2002
40
24
PMIDPaper TitleJournal TitlePublished Year
37436997Transcriptional and epigenomic profiling identifies YAP signaling as a key regulator of intestinal epithelium maturation.Sci Adv2023
37992398Detecting host responses to microbial stimulation using primary epithelial organoids.Gut Microbes2023
36377861Promoter sequence and architecture determine expression variability and confer robustness to genetic variants.Elife2022
32213639Characterization of <i>Arabidopsis thaliana</i> Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways.Plant Cell2020
33274667Personalized B cell response to the <i>Lactobacillus rhamnosus GG</i> probiotic in healthy human subjects: a randomized trial.Gut Microbes2020
30566651Comprehensive profiling of the fission yeast transcription start site activity during stress and media response.Nucleic Acids Res2019
29355922A new class of genic nuclear RNA species in Arabidopsis.FEBS Lett2018
30212902The RNA exosome contributes to gene expression regulation during stem cell differentiation.Nucleic Acids Res2018
29695774Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies.Nat Commun2018
29263823Relation between <i>NOD2</i> genotype and changes in innate signaling in Crohn's disease on mRNA and miRNA levels.NPJ Genom Med2017
28345861Identification of Gene Transcription Start Sites and Enhancers Responding to Pulmonary Carbon Nanotube Exposure in Vivo.ACS Nano2017
26902262Regulating retrotransposon activity through the use of alternative transcription start sites.EMBO Rep2016
28025337On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase.Database (Oxford)2016
27545890The Adipose Transcriptional Response to Insulin Is Determined by Obesity, Not Insulin Sensitivity.Cell Rep2016
24670763An atlas of active enhancers across human cell types and tissues.Nature2014
25387874Nuclear stability and transcriptional directionality separate functionally distinct RNA species.Nat Commun2014
24990076Identification of TNF-α-responsive promoters and enhancers in the intestinal epithelial cell model Caco-2.DNA Res2014
23333561Hepatocyte growth factor activator inhibitor-2 prevents shedding of matriptase.Exp Cell Res2013
24359594Molecular constituents of the extracellular matrix in rat liver mounting a hepatic progenitor cell response for tissue repair.Fibrogenesis Tissue Repair2013
24204759Detection of active matriptase using a biotinylated chloromethyl ketone peptide.PLoS One2013
23851456Polyadenylation site-induced decay of upstream transcripts enforces promoter directionality.Nat Struct Mol Biol2013
21226903Expression profile of the N-myc Downstream Regulated Gene 2 (NDRG2) in human cancers with focus on breast cancer.BMC Cancer2011
21310043The level of claudin-7 is reduced as an early event in colorectal carcinogenesis.BMC Cancer2011
21148558Transport via the transcytotic pathway makes prostasin available as a substrate for matriptase.J Biol Chem2011
20025891Profile of TP53 gene mutations in sinonasal cancer.Mutat Res2010
19950227Mutations in TP53 tumor suppressor gene in wood dust-related sinonasal cancer.Int J Cancer2010
19555470Expression of prostasin and its inhibitors during colorectal cancer carcinogenesis.BMC Cancer2009
19374780Lack of acute phase response in the livers of mice exposed to diesel exhaust particles or carbon black by inhalation.Part Fibre Toxicol2009
18186150COX-2 and p53 in human sinonasal cancer: COX-2 expression is associated with adenocarcinoma histology and wood-dust exposure.Int J Cancer2008
18289366K-ras mutations in sinonasal cancers in relation to wood dust exposure.BMC Cancer2008
17590384Inflammatory response and genotoxicity of seven wood dusts in the human epithelial cell line A549.Mutat Res2007
16504008Cytokine expression in mice exposed to diesel exhaust particles by inhalation. Role of tumor necrosis factor.Part Fibre Toxicol2006
15798890Tumor necrosis factor is not required for particle-induced genotoxicity and pulmonary inflammation.Arch Toxicol2005
15110083Cell-specific oxidative DNA damage induced by estrogen in rat testicular cells in vitro.Toxicol Lett2004
15279835Inflammatory and genotoxic effects of diesel particles in vitro and in vivo.Mutat Res2004
15450425Sucrose and IQ induced mutations in rat colon by independent mechanism.Mutat Res2004
12919962Oxidative DNA damage and defence gene expression in the mouse lung after short-term exposure to diesel exhaust particles by inhalation.Carcinogenesis2003
12937889Dietary elevated sucrose modulation of diesel-induced genotoxicity in the colon and liver of Big Blue rats.Arch Toxicol2003
12919963DNA adduct formation and oxidative stress in colon and liver of Big Blue rats after dietary exposure to diesel particles.Carcinogenesis2003
12297145Inhalation of ozone induces DNA strand breaks and inflammation in mice.Mutat Res2002
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Collaborators

Albin Sandelin
University of Copenhagen
Co-authored papers 16
Mette Boyd
University of Copenhagen
Co-authored papers 12
Robin Andersson
University of Copenhagen
Co-authored papers 10
Yun Chen
Hospital of Obstetrics and Gynecology, Fudan University
Co-authored papers 10
Kristoffer Vitting-Seerup
Technical University of Denmark
Co-authored papers 4
Torben Heick Jensen
Universitetsbyen 81, Aarhus University
Co-authored papers 4
Morana Vitezic
University of Copenhagen
Co-authored papers 4
Berit Lilje
Statens Serum Institut
Co-authored papers 4
Eivind Valen
University of Bergen
Co-authored papers 3
Ilka Hoof
LEO Pharma
Co-authored papers 3
Peter Refsing Andersen
Institute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA)
Co-authored papers 3
Mette J??rgensen
University of Copenhagen
Co-authored papers 3
Carsten O Daub
International Institute of Molecular and Cell Biology in Warsaw
Co-authored papers 2
Yoshihide Hayashizaki
Center for Integrative Medical Sciences
Co-authored papers 2
Karl Ekwall
Karolinska Institute
Co-authored papers 2
Kang Li
Institute of Insect Science and Technology, South China Normal University
Co-authored papers 2
Timo Lassmann
Telethon Kids Institute, University of Western Australia
Co-authored papers 2
Xiaobei Zhao
University of Tennessee Health Science Center
Co-authored papers 2
Evgenia Ntini
Max Planck Institute for Molecular Genetics
Co-authored papers 2
Piero Carninci
RIKEN Center for Integrative Medical Sciences
Co-authored papers 2
Carole L Yauk
University of Ottawa
Co-authored papers 2
Nicolas Rapin
Rigshospitalet, University of Copenhagen
Co-authored papers 2
Hideya Kawaji
RIKEN Center for Integrative Medical Sciences
Co-authored papers 2
Sarah Rennie
University of Copenhagen
Co-authored papers 2
Alistair R R Forrest
RIKEN Center for Integrative Medical Sciences
Co-authored papers 2
Terrence F Meehan
European Bioinformatics Institute
Co-authored papers 1
David A Hume
Mater Research Institute-UQ, Translational Research Institute
Co-authored papers 1
Ferenc M??ller
University of Birmingham
Co-authored papers 1
Olga Hrydziuszko
Stockholm University
Co-authored papers 1
Dagmar Glatz
University Hospital Regensburg
Co-authored papers 1
Release 1.2