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Author Details

David Van Valen
California Institute of Technology, USA. institute of technology.edu.
2009
20
12
Emma Lundberg (CM4AI)
PMIDPaper TitleJournal TitlePublished Year
37732188Accurate single-molecule spot detection for image-based spatial transcriptomics with weakly supervised deep learning.bioRxiv2024
38045277A Foundation Model for Cell Segmentation.bioRxiv2024
37434003Scaling biological discovery at the interface of deep learning and cellular imaging.Nat Methods2023
37734323A microwell platform for high-throughput longitudinal phenotyping and selective retrieval of organoids.Cell Syst2023
37468587A spatially resolved timeline of the human maternal-fetal interface.Nature2023
34795433Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning.Nat Biotechnol2022
35896733Imaging cell biology.Nat Cell Biol2022
35277696Author Correction: The immunoregulatory landscape of human tuberculosis granulomas.Nat Immunol2022
35058616The immunoregulatory landscape of human tuberculosis granulomas.Nat Immunol2022
32868913Single-cell metabolic profiling of human cytotoxic T cells.Nat Biotechnol2021
33398191DeepCell Kiosk: scaling deep learning-enabled cellular image analysis with Kubernetes.Nat Methods2021
33437045Publisher Correction: DeepCell Kiosk: scaling deep learning-enabled cellular image analysis with Kubernetes.Nat Methods2021
31133758Deep learning for cellular image analysis.Nat Methods2019
31562479Voices in methods development.Nat Methods2019
30193111A Structured Tumor-Immune Microenvironment in Triple Negative Breast Cancer Revealed by Multiplexed Ion Beam Imaging.Cell2018
28396000Measuring Signaling and RNA-Seq in the Same Cell Links Gene Expression to Dynamic Patterns of NF-κB Activation.Cell Syst2017
27814364Deep Learning Automates the Quantitative Analysis of Individual Cells in Live-Cell Imaging Experiments.PLoS Comput Biol2016
22727695A single-molecule Hershey-Chase experiment.Curr Biol2012
20712993Ion-dependent dynamics of DNA ejections for bacteriophage lambda.Biophys J2010
19217847Biochemistry on a leash: the roles of tether length and geometry in signal integration proteins.Biophys J2009
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Collaborators

Michael Angelo
Co-authored papers 6
Vladimir Jojic
Calico Life Sciences LLC
Co-authored papers 2
Mialy M DeFelice
Stanford University
Co-authored papers 2
Emma Lundberg (CM4AI)
Stanford University
Co-authored papers 2
Michele Donato
Co-authored papers 2
Travis J Hollmann
Memorial Sloan Kettering Cancer Center
Co-authored papers 2
Purvesh Khatri
University of California San Francisco
Co-authored papers 2
Alex K Shalek
Institute for Medical Engineering & Science, Massachusetts Institute of Technology
Co-authored papers 1
Benjamin P Kleinstiver
Center for Genomic Medicine, Massachusetts General Hospital
Co-authored papers 1
Garry P Nolan
Stanford University School of Medicine
Co-authored papers 1
Paola Picotti
Institute of Molecular Systems Biology, ETH Zurich
Co-authored papers 1
Nikolai Slavov
and Barnett Institute, Northeastern University
Co-authored papers 1
Stefan W Hell
Max Planck Institute for Biophysical Chemistry
Co-authored papers 1
Virginia D Winn
Stanford University
Co-authored papers 1
Clifford P Brangwynne
Lewis-Sigler Institute for Integrative Genomics, Princeton University
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Polina Anikeeva
Massachusetts Institute of Technology
Co-authored papers 1
Edward S Boyden
McGovern Institute for Brain Research
Co-authored papers 1
Qingming Luo
Hainan University
Co-authored papers 1
Olga G Troyanskaya
Lewis-Sigler Institute for Integrative Genomics, Princeton University
Co-authored papers 1
Anne-Claude Gingras
Lunenfeld-Tanenbaum Research Institute
Co-authored papers 1
Loren L Looger
Howard Hughes Medical Institute
Co-authored papers 1
Edith Heard
Institut Curie, PSL Research University, CNRS UMR 5, INSERM U934
Co-authored papers 1
Laura L Kiessling
Massachusetts Institute of Technology
Co-authored papers 1
Ambrose J Carr
Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center
Co-authored papers 1
Rob Knight
University of California
Co-authored papers 1
Brenda J Andrews
University of Toronto
Co-authored papers 1
Tobias Meyer
Co-authored papers 1
Nicholas J Loman
University of Birmingham
Co-authored papers 1
Wolf Reik
The Babraham Institute
Co-authored papers 1
Rachel Karchin
Johns Hopkins University
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Release 1.2